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PDB: 132 results

6LSR
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BU of 6lsr by Molmil
Cryo-EM structure of a pre-60S ribosomal subunit - state B
Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Liang, X, Zuo, M, Zhang, Y, Li, N, Ma, C, Dong, M, Gao, N.
Deposit date:2020-01-20
Release date:2020-08-26
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural snapshots of human pre-60S ribosomal particles before and after nuclear export.
Nat Commun, 11, 2020
6LSS
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BU of 6lss by Molmil
Cryo-EM structure of a pre-60S ribosomal subunit - state preA
Descriptor: 28S rRNA, 5S rRNA, 60S ribosomal protein L11, ...
Authors:Liang, X, Zuo, M, Zhang, Y, Li, N, Ma, C, Dong, M, Gao, N.
Deposit date:2020-01-20
Release date:2020-08-26
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural snapshots of human pre-60S ribosomal particles before and after nuclear export.
Nat Commun, 11, 2020
5YRP
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BU of 5yrp by Molmil
Crystal structure of the EAL domain of Mycobacterium smegmatis DcpA
Descriptor: MAGNESIUM ION, Sensory box/response regulator
Authors:Chen, H.J, li, N, Luo, Y, Jiang, Y.L, Zhou, C.Z, Chen, Y, Li, Q.
Deposit date:2017-11-09
Release date:2018-05-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:The GDP-switched GAF domain of DcpA modulates the concerted synthesis/hydrolysis of c-di-GMP inMycobacterium smegmatis.
Biochem. J., 475, 2018
8IVQ
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BU of 8ivq by Molmil
Cryo-EM structure of mouse BIRC6, Global map
Descriptor: Isoform 2 of Baculoviral IAP repeat-containing protein 6
Authors:Liu, S, Jiang, T, Bu, F, Zhao, J, Wang, G, Li, N, Gao, N, Qiu, X.
Deposit date:2023-03-28
Release date:2024-01-24
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular mechanisms underlying the BIRC6-mediated regulation of apoptosis and autophagy.
Nat Commun, 15, 2024
4EQ8
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BU of 4eq8 by Molmil
Crystal structure of PA1844 from Pseudomonas aeruginosa PAO1
Descriptor: GLYCEROL, Putative uncharacterized protein
Authors:Shang, G, Li, N, Zhang, J, Lu, D, Yu, Q, Zhao, Y, Liu, X, Xu, S, Gu, L.
Deposit date:2012-04-18
Release date:2012-09-12
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (1.392 Å)
Cite:Structural insight into how Pseudomonas aeruginosa peptidoglycanhydrolase Tse1 and its immunity protein Tsi1 function.
Biochem.J., 448, 2012
5HH9
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BU of 5hh9 by Molmil
Structure of PvdN from Pseudomonas aeruginosa
Descriptor: PYRIDOXAL-5'-PHOSPHATE, PvdN
Authors:Xia, H, Bai, G, Liu, S, Li, N, Xu, S, Chen, K, Yao, Q, Gu, L.
Deposit date:2016-01-10
Release date:2017-01-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural and Biochemical Characterization of a Novel L-Cystine Desulfurase involved in the biosynthesis of the major siderophore pyoverdine in Pseudomonas aeruginosa
To Be Published
4EQA
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BU of 4eqa by Molmil
Crystal structure of PA1844 in complex with PA1845 from Pseudomonas aeruginosa PAO1
Descriptor: Putative uncharacterized protein
Authors:Shang, G, Li, N, Zhang, J, Lu, D, Yu, Q, Zhao, Y, Liu, X, Xu, S, Gu, L.
Deposit date:2012-04-18
Release date:2012-09-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insight into how Pseudomonas aeruginosa peptidoglycanhydrolase Tse1 and its immunity protein Tsi1 function.
Biochem.J., 448, 2012
4F5Y
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BU of 4f5y by Molmil
Crystal structure of human STING CTD complex with C-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, Transmembrane protein 173
Authors:Gu, L, Shang, G, Zhu, D, Li, N, Zhang, J, Zhu, C, Lu, D, Liu, C, Yu, Q, Zhao, Y, Xu, S.
Deposit date:2012-05-13
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Crystal structures of STING protein reveal basis for recognition of cyclic di-GMP
Nat.Struct.Mol.Biol., 19, 2012
4KZD
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BU of 4kzd by Molmil
Crystal structure of an RNA aptamer in complex with fluorophore and Fab
Descriptor: 4-(3,5-difluoro-4-hydroxybenzyl)-1,2-dimethyl-1H-imidazol-5-ol, BL3-6 Fab antibody, heavy chain, ...
Authors:Huang, H, Suslov, N.B, Li, N, Koldobskaya, Y, Rice, P.A, Piccirilli, J.A.
Deposit date:2013-05-29
Release date:2014-06-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.186 Å)
Cite:A G-quadruplex-containing RNA activates fluorescence in a GFP-like fluorophore.
Nat.Chem.Biol., 10, 2014
4F5W
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BU of 4f5w by Molmil
Crystal structure of ligand free human STING CTD
Descriptor: CALCIUM ION, Transmembrane protein 173
Authors:Gu, L, Shang, G, Zhu, D, Li, N, Zhang, J, Zhu, C, Lu, D, Liu, C, Yu, Q, Zhao, Y, Xu, S.
Deposit date:2012-05-13
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Crystal structures of STING protein reveal basis for recognition of cyclic di-GMP
Nat.Struct.Mol.Biol., 19, 2012
4KZE
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BU of 4kze by Molmil
Crystal structure of an RNA aptamer in complex with Fab
Descriptor: BL3-6 Fab antibody, heavy chain, light chain, ...
Authors:Huang, H, Suslov, N.B, Li, N, Koldobskaya, Y, Rice, P.A, Piccirilli, J.A.
Deposit date:2013-05-29
Release date:2014-06-18
Last modified:2014-07-30
Method:X-RAY DIFFRACTION (2.404 Å)
Cite:A G-quadruplex-containing RNA activates fluorescence in a GFP-like fluorophore.
Nat.Chem.Biol., 10, 2014
3J3T
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BU of 3j3t by Molmil
Structural dynamics of the MecA-ClpC complex revealed by cryo-EM
Descriptor: Adapter protein MecA 1, Negative regulator of genetic competence ClpC/MecB
Authors:Liu, J, Mei, Z, Li, N, Qi, Y, Xu, Y, Shi, Y, Wang, F, Lei, J, Gao, N.
Deposit date:2013-04-18
Release date:2013-05-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Structural dynamics of the MecA-ClpC complex: a type II AAA+ protein unfolding machine.
J.Biol.Chem., 288, 2013
3J3R
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BU of 3j3r by Molmil
Structural dynamics of the MecA-ClpC complex revealed by cryo-EM
Descriptor: Adapter protein MecA 1, Negative regulator of genetic competence ClpC/MecB
Authors:Liu, J, Mei, Z, Li, N, Qi, Y, Xu, Y, Shi, Y, Wang, F, Lei, J, Gao, N.
Deposit date:2013-04-18
Release date:2013-05-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (9.4 Å)
Cite:Structural dynamics of the MecA-ClpC complex: a type II AAA+ protein unfolding machine
J.Biol.Chem., 288, 2013
3J3U
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BU of 3j3u by Molmil
Structural dynamics of the MecA-ClpC complex revealed by cryo-EM
Descriptor: Adapter protein MecA 1, Negative regulator of genetic competence ClpC/MecB
Authors:Liu, J, Mei, Z, Li, N, Qi, Y, Xu, Y, Shi, Y, Wang, F, Lei, J, Gao, N.
Deposit date:2013-04-18
Release date:2013-05-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Structural dynamics of the MecA-ClpC complex: a type II AAA+ protein unfolding machine.
J.Biol.Chem., 288, 2013
3J3S
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BU of 3j3s by Molmil
Structural dynamics of the MecA-ClpC complex revealed by cryo-EM
Descriptor: Adapter protein MecA 1, Negative regulator of genetic competence ClpC/MecB
Authors:Liu, J, Mei, Z, Li, N, Qi, Y, Xu, Y, Shi, Y, Wang, F, Lei, J, Gao, N.
Deposit date:2013-04-18
Release date:2013-05-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Structural dynamics of the MecA-ClpC complex: a type II AAA+ protein unfolding machine.
J.Biol.Chem., 288, 2013
4ITC
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BU of 4itc by Molmil
Crystal Structure Analysis of the K1 Cleaved Adhesin domain of Lys-gingipain (Kgp) from Porphyromonas gingivalis W83
Descriptor: CALCIUM ION, GLYCEROL, GUANIDINE, ...
Authors:Ganuelas, L.A, Li, N, Hunter, N, Collyer, C.A.
Deposit date:2013-01-18
Release date:2013-09-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The lysine gingipain adhesin domains from Porphyromonas gingivalis interact with erythrocytes and albumin: Structures correlate to function.
Eur J Microbiol Immunol (Bp), 3, 2013
4LAF
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BU of 4laf by Molmil
Crystal structure of PnpB complex with FMN
Descriptor: FLAVIN MONONUCLEOTIDE, NAD(P)H dehydrogenase (quinone)
Authors:Su, J, Zhang, C, Li, N, Gu, L.
Deposit date:2013-06-19
Release date:2014-06-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.761 Å)
Cite:Crystal structure of PnpB complex with FMN
To be Published
4LA4
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BU of 4la4 by Molmil
Crystal structure of native PnpB
Descriptor: NAD(P)H dehydrogenase (quinone)
Authors:Su, J, Zhang, C, Li, N, Gu, L.
Deposit date:2013-06-19
Release date:2014-06-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of native PnpB
To be Published
7Y1B
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BU of 7y1b by Molmil
3.2 angstrom cryo-EM structure of extracellular region of mouse Basigin-2 in complex with the Fab fragment of antibody 6E7F1
Descriptor: Heavy chain of 6E7F1, Isoform 2 of Basigin, Light chain of 6E7F1
Authors:Zhang, H, Yang, X, Xue, Y, Huang, Y, Mo, X, Zhang, H, Li, N, Gao, N, Li, X, Wang, S, Gao, Y, Liao, J.
Deposit date:2022-06-08
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Allosteric modulation of monocarboxylate transporters 1 and 4 by targeting their chaperon Basigin
To Be Published
7Y1Q
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BU of 7y1q by Molmil
5.0 angstrom cryo-EM structure of transmembrane regions of mouse Basigin/MCT1 in complex with antibody 6E7F1
Descriptor: Isoform 2 of Basigin, Monocarboxylate transporter 1
Authors:Zhang, H, Yang, X, Xue, Y, Huang, Y, Mo, X, Zhang, H, Li, N, Gao, N, Li, X, Wang, S, Gao, Y, Liao, J.
Deposit date:2022-06-08
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (5.03 Å)
Cite:Allosteric modulation of monocarboxylate transporters 1 and 4 by targeting their chaperon Basigin-2
To Be Published
5XF8
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BU of 5xf8 by Molmil
Cryo-EM structure of the Cdt1-MCM2-7 complex in AMPPNP state
Descriptor: Cell division cycle protein CDT1, DNA replication licensing factor MCM2, DNA replication licensing factor MCM3, ...
Authors:Zhai, Y, Cheng, E, Wu, H, Li, N, Yung, P.Y, Gao, N, Tye, B.K.
Deposit date:2017-04-09
Release date:2017-05-03
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Open-ringed structure of the Cdt1-Mcm2-7 complex as a precursor of the MCM double hexamer
Nat. Struct. Mol. Biol., 24, 2017
7EJG
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BU of 7ejg by Molmil
Crystal structure of PBP domain of RMCA
Descriptor: CHLORIDE ION, EAL domain-containing protein, GLYCEROL, ...
Authors:Gu, L, Li, N.
Deposit date:2021-04-02
Release date:2022-04-06
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal structure of PBP domain of RMCA
To Be Published
7F00
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BU of 7f00 by Molmil
Crystal structure of SPD_0310
Descriptor: SULFATE ION, UPF0371 protein SPRM200_0309
Authors:Cao, K, Zhang, T, Li, N, Yang, X, Ding, J, He, Q, Sun, X.
Deposit date:2021-06-03
Release date:2022-04-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Identification and Tetramer Structure of Hemin-Binding Protein SPD_0310 Linked to Iron Homeostasis and Virulence of Streptococcus pneumoniae.
Msystems, 7, 2022
5ZQZ
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BU of 5zqz by Molmil
Structure of human mitochondrial trifunctional protein, tetramer
Descriptor: Trifunctional enzyme subunit alpha, mitochondrial, Trifunctional enzyme subunit beta
Authors:Liang, K, Li, N, Dai, J, Wang, X, Liu, P, Chen, X, Wang, C, Gao, N, Xiao, J.
Deposit date:2018-04-20
Release date:2018-06-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structure of human mitochondrial trifunctional protein
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5ZRV
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BU of 5zrv by Molmil
Structure of human mitochondrial trifunctional protein, octamer
Descriptor: Trifunctional enzyme subunit alpha, mitochondrial, Trifunctional enzyme subunit beta
Authors:Liang, K, Li, N, Dai, J, Wang, X, Liu, P, Chen, X, Wang, C, Gao, N, Xiao, J.
Deposit date:2018-04-25
Release date:2018-06-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Cryo-EM structure of human mitochondrial trifunctional protein
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

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PDB entries from 2024-05-15

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