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PDB: 304 件

5CDE
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R372A mutant of Xaa-Pro dipeptidase from Xanthomonas campestris
分子名称: Proline dipeptidase, SULFATE ION, ZINC ION
著者Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.
登録日2015-07-03
公開日2016-09-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献R372A mutant of Xaa-Pro dipeptidase from Xanthomonas campestris at 1.85 Angstrom resolution
To Be Published
5CDL
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Proline dipeptidase from Deinococcus radiodurans (selenomethionine derivative)
分子名称: MANGANESE (II) ION, PHOSPHATE ION, Proline dipeptidase
著者Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.
登録日2015-07-04
公開日2016-08-10
最終更新日2018-07-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Proline dipeptidase from Deinococcus radiodurans (selenomethionine derivative)
To Be Published
5CDV
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Proline dipeptidase from Deinococcus radiodurans R1
分子名称: MANGANESE (II) ION, PHOSPHATE ION, Proline dipeptidase, ...
著者Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.
登録日2015-07-05
公開日2016-08-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Proline dipeptidase from Deinococcus radiodurans R1 at 1.45 Angstrom resolution
To Be Published
5CNX
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BU of 5cnx by Molmil
Crystal structure of Xaa-Pro aminopeptidase from Escherichia coli K12
分子名称: Aminopeptidase YpdF, CACODYLATE ION, GLYCEROL, ...
著者Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.D.
登録日2015-07-18
公開日2016-07-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures and activities of widely conserved small prokaryotic aminopeptidases-P clarify classification of M24B peptidases
Proteins, 2018
4DHW
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BU of 4dhw by Molmil
Crystal structure of Peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with Adipic acid at 2.4 Angstrom resolution
分子名称: Peptidyl-tRNA hydrolase, hexanedioic acid
著者Kumar, A, Singh, A, Singh, N, Sinha, M, Sharma, S, Arora, A, Singh, T.P.
登録日2012-01-30
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Crystal structure of Peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with Adipic acid at 2.4 Angstrom resolution
To be Published
4ERX
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Crystal structure of the complex of peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with diethylene glycol at 2.5 Angstrom resolution
分子名称: DI(HYDROXYETHYL)ETHER, Peptidyl-tRNA hydrolase
著者Kumar, A, Singh, A, Singh, N, Sinha, M, Sharma, S, Arora, A, Singh, T.P.
登録日2012-04-21
公開日2012-05-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the complex of peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with diethylene glycol at 2.5 Angstrom resolution
To be Published
2RKW
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BU of 2rkw by Molmil
Intermediate position of ATP on its trail to the binding pocket inside the subunit B mutant R416W of the energy converter A1Ao ATP synthase
分子名称: V-type ATP synthase beta chain
著者Kumar, A, Manimekalai, M.S.S, Balakrishna, A.M, Hunke, C, Gruber, G.
登録日2007-10-18
公開日2008-09-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Spectroscopic and crystallographic studies of the mutant R416W give insight into the nucleotide binding traits of subunit B of the A1Ao ATP synthase
Proteins, 75, 2009
5CIK
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BU of 5cik by Molmil
Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris in citrate condition
分子名称: CITRIC ACID, GLYCEROL, Proline dipeptidase
著者Kumar, A, Are, V, Ghosh, B, Agrawal, U, Jamdar, S, Makde, R.D.
登録日2015-07-13
公開日2016-07-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris in citrate condition
To Be Published
2MS5
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Structural dynamics of double-helical RNA having CAG motif
分子名称: RNA_(5'-R(P*CP*CP*GP*CP*AP*GP*CP*GP*G)-3')
著者Kumar, A, Tawani, A.
登録日2014-07-23
公開日2015-01-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Insights Reveal the Dynamics of the Repeating r(CAG) Transcript Found in Huntington's Disease (HD) and Spinocerebellar Ataxias (SCAs)
Plos One, 10, 2015
2NCQ
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Structural insights of r(CGG) motif found in Fragile X Syndrome and Fragile-X associated tremor/ataxia syndrome (FXTAS) at 45 degree C
分子名称: RNA_(5'-R(P*CP*CP*GP*CP*GP*GP*CP*GP*G)-3')
著者Kumar, A, Mishra, S.K.
登録日2016-04-12
公開日2017-04-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural insights reveal the dynamics of the repeating r(CGG) motif found in Fragile X Syndrome and Fragile-X associated tremor/ataxia syndrome (FXTAS)
To be Published
2NCR
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Structural insight for dynamics of r(CGG) motif RNA found in Fragile X syndrome/ Fragile X tremor ataxia at 25 degree C
分子名称: RNA_(5'-R(P*CP*CP*GP*CP*GP*GP*CP*GP*G)-3')
著者Kumar, A, Mishra, S.K.
登録日2016-04-12
公開日2017-04-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural insights reveal the dynamics of the repeating r(CGG) motif found in Fragile X Syndrome and Fragile-X associated tremor/ataxia syndrome (FXTAS)
To be Published
2MS6
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BU of 2ms6 by Molmil
Human Telomeric G-quadruplex DNA sequence (TTAGGGT)4 complexed with Flavonoid Quercetin
分子名称: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, DNA_(5'-D(*TP*TP*AP*GP*GP*GP*T)-3')
著者Kumar, A, Tawani, A.
登録日2014-07-24
公開日2015-01-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Insight into the interaction of Flavonoids with Human Telomeric Sequence
Sci Rep, 5, 2015
2M5R
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BU of 2m5r by Molmil
Solution structure of holo-acyl carrier protein of Leishmania major
分子名称: 4'-PHOSPHOPANTETHEINE, Acyl carrier protein
著者Kumar, A, Surolia, A, Sundd, M.
登録日2013-03-07
公開日2014-09-17
実験手法SOLUTION NMR
主引用文献NMR structures of the apo- and holo- forms of the acyl carrier protein of Leishmania major
To be Published
2N6C
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BU of 2n6c by Molmil
Solution structure for quercetin complexed with c-myc G-quadruplex DNA
分子名称: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, DNA (5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*GP*G)-3')
著者Kumar, A, Tawani, A.
登録日2015-08-18
公開日2016-09-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure for quercetin complexed with c-myc G-quadruplex DNA
To be Published
8QN0
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BU of 8qn0 by Molmil
Soluble epoxide hydrolase in complex with RK3
分子名称: (3~{a}~{R},6~{a}~{S})-~{N}-[(2,4-dichlorophenyl)methyl]-5-(4-methylphenyl)sulfonyl-1,3,3~{a},4,6,6~{a}-hexahydropyrrolo[3,4-c]pyrrole-2-carboxamide, 1,2-ETHANEDIOL, Bifunctional epoxide hydrolase 2
著者Kumar, A, Zhu, F, Ehrler, J.M.H, Li, F, Empel, C, Xu, Y, Atodiresei, I, Koenigs, R.M, Proschak, E, Knapp, S, Structural Genomics Consortium (SGC)
登録日2023-09-25
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Photosensitization enables Pauson-Khand-type reactions with nitrenes.
Science, 383, 2024
8QMZ
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Soluble epoxide hydrolase in complex with RK4
分子名称: (3~{a}~{R},6~{a}~{S})-~{N}-[(2,4-dichlorophenyl)methyl]-2-(4-methylphenyl)sulfonyl-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrole-5-carboxamide, 1,2-ETHANEDIOL, Bifunctional epoxide hydrolase 2
著者Kumar, A, Zhu, F, Ehrler, J.M.H, Li, F, Empel, C, Xu, Y, Atodiresei, I, Koenigs, R.M, Proschak, E, Knapp, S, Structural Genomics Consortium (SGC)
登録日2023-09-25
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Photosensitization enables Pauson-Khand-type reactions with nitrenes.
Science, 383, 2024
5Y06
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BU of 5y06 by Molmil
Structural characterization of msmeg_4306 from Mycobacterium smegmatis
分子名称: GLYCEROL, ZINC ION, msmeg_4306
著者Kumar, A, Karthikeyan, S.
登録日2017-07-14
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.606 Å)
主引用文献Crystal structure of the MSMEG_4306 gene product from Mycobacterium smegmatis
Acta Crystallogr F Struct Biol Commun, 74, 2018
6JMI
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BU of 6jmi by Molmil
Crystal structure of M.tuberculosis Rv0081
分子名称: SULFATE ION, Uncharacterized HTH-type transcriptional regulator Rv0081
著者Kumar, A, Phulera, S, Mande, C.S.
登録日2019-03-11
公開日2019-04-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.896 Å)
主引用文献Structural basis of hypoxic gene regulation by the Rv0081 transcription factor of Mycobacterium tuberculosis.
Febs Lett., 593, 2019
8QZD
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BU of 8qzd by Molmil
Soluble epoxide hydrolase in complex with Epoxykinin
分子名称: 1,2-ETHANEDIOL, 2-[5-bromanyl-3-[2,2,2-tris(fluoranyl)ethanoyl]indol-1-yl]-N-cycloheptyl-ethanamide, BROMIDE ION, ...
著者Kumar, A, Ehrler, J.M.H, Ziegler, S, Doetsch, L, Proschak, E, Knapp, S, Structural Genomics Consortium (SGC)
登録日2023-10-27
公開日2024-02-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Discovery of the sEH Inhibitor Epoxykynin as a Potent Kynurenine Pathway Modulator.
J.Med.Chem., 67, 2024
1YWV
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BU of 1ywv by Molmil
Crystal Structures of Proto-Oncogene Kinase Pim1: a Target of Aberrant Somatic Hypermutations in Diffuse Large Cell Lymphoma
分子名称: IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase Pim-1
著者Kumar, A, Mandiyan, V, Suzuki, Y, Zhang, C, Rice, J, Tsai, J, Artis, D.R, Ibrahim, P, Bremer, R.
登録日2005-02-18
公開日2005-04-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of proto-oncogene kinase Pim1: a target of aberrant somatic hypermutations in diffuse large cell lymphoma.
J.Mol.Biol., 348, 2005
1YXU
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BU of 1yxu by Molmil
Crystal Structure of Kinase Pim1 in Complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase Pim-1
著者Kumar, A, Mandiyan, V, Suzuki, Y, Zhang, C, Rice, J, Tsai, J, Artis, D.R, Ibrahim, P, Bremer, R.
登録日2005-02-22
公開日2005-04-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Crystal Structures of Proto-oncogene Kinase Pim1: A Target of Aberrant Somatic Hypermutations in Diffuse Large Cell Lymphoma.
J.Mol.Biol., 348, 2005
5Y05
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Structural characterization of msmeg_4306 from Mycobacterium smegmatis
分子名称: ZINC ION, msmeg_4306
著者Kumar, A, Karthikeyan, S.
登録日2017-07-14
公開日2018-05-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.799 Å)
主引用文献Crystal structure of the MSMEG_4306 gene product from Mycobacterium smegmatis
Acta Crystallogr F Struct Biol Commun, 74, 2018
1YXV
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Crystal Structure of Kinase Pim1 in complex with 3,4-Dihydroxy-1-methylquinolin-2(1H)-one
分子名称: 3,4-DIHYDROXY-1-METHYLQUINOLIN-2(1H)-ONE, IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase Pim-1
著者Kumar, A, Mandiyan, V, Suzuki, Y, Zhang, C, Rice, J, Tsai, J, Artis, D.R, Ibrahim, P, Bremer, R.
登録日2005-02-22
公開日2005-04-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of Proto-oncogene Kinase Pim1: A Target of Aberrant Somatic Hypermutations in Diffuse Large Cell Lymphoma.
J.Mol.Biol., 348, 2005
1YXS
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Crystal Structure of Kinase Pim1 with P123M mutation
分子名称: IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase Pim-1
著者Kumar, A, Mandiyan, V, Suzuki, Y, Zhang, C, Rice, J, Tsai, J, Artis, D.R, Ibrahim, P, Bremer, R.
登録日2005-02-22
公開日2005-04-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of proto-oncogene kinase Pim1: a target of aberrant somatic hypermutations in diffuse large cell lymphoma.
J.Mol.Biol., 348, 2005
1YXT
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Crystal Structure of Kinase Pim1 in complex with AMPPNP
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Proto-oncogene serine/threonine-protein kinase Pim-1
著者Kumar, A, Mandiyan, V, Suzuki, Y, Zhang, C, Rice, J, Tsai, J, Artis, D.R, Ibrahim, P, Bremer, R.
登録日2005-02-22
公開日2005-04-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of proto-oncogene kinase Pim1: a target of aberrant somatic hypermutations in diffuse large cell lymphoma.
J.Mol.Biol., 348, 2005

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