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PDB: 417 results

6J9M
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BU of 6j9m by Molmil
NmeBH+AcrIIC2
Descriptor: AcrIIC2, CRISPR-associated endonuclease Cas9
Authors:Zhu, Y.L, Gao, A, Serganov, A, Gao, P.
Deposit date:2019-01-23
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.394 Å)
Cite:Diverse Mechanisms of CRISPR-Cas9 Inhibition by Type IIC Anti-CRISPR Proteins.
Mol. Cell, 74, 2019
6J9K
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Apo-AcrIIC2
Descriptor: AcrIIC2, MAGNESIUM ION
Authors:Zhu, Y.L, Gao, A, Serganov, A, Gao, P.
Deposit date:2019-01-23
Release date:2019-03-06
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.234 Å)
Cite:Diverse Mechanisms of CRISPR-Cas9 Inhibition by Type IIC Anti-CRISPR Proteins.
Mol. Cell, 74, 2019
6J9L
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FnoBH+AcrIIC2
Descriptor: AcrIIC2, HNH endonuclease family protein
Authors:Zhu, Y.L, Gao, A, Serganov, A, Gao, P.
Deposit date:2019-01-23
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Diverse Mechanisms of CRISPR-Cas9 Inhibition by Type IIC Anti-CRISPR Proteins.
Mol. Cell, 74, 2019
6J9N
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BU of 6j9n by Molmil
NmeHNH+AcrIIC3
Descriptor: AcrIIC3, CRISPR-associated endonuclease Cas9
Authors:Zhu, Y.L, Gao, A, Serganov, A, Gao, P.
Deposit date:2019-01-23
Release date:2019-03-06
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (2.606 Å)
Cite:Diverse Mechanisms of CRISPR-Cas9 Inhibition by Type IIC Anti-CRISPR Proteins.
Mol. Cell, 74, 2019
4NJL
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BU of 4njl by Molmil
Crystal structure of middle east respiratory syndrome coronavirus S2 protein fusion core
Descriptor: S protein, TRIETHYLENE GLYCOL
Authors:Zhu, Y, Lu, L, Qin, L, Ye, S, Jiang, S, Zhang, R.
Deposit date:2013-11-10
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-based discovery of Middle East respiratory syndrome coronavirus fusion inhibitor.
Nat Commun, 5, 2014
8I7O
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BU of 8i7o by Molmil
In situ structure of axonemal doublet microtubules in mouse sperm with 16-nm repeat
Descriptor: Cilia and flagella-associated protein 77, Cilia- and flagella-associated protein 20, Cilia- and flagella-associated protein 276, ...
Authors:Zhu, Y, Yin, G.L, Tai, L.H, Sun, F.
Deposit date:2023-02-01
Release date:2023-10-11
Last modified:2023-12-06
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:In-cell structural insight into the stability of sperm microtubule doublet.
Cell Discov, 9, 2023
8I7R
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BU of 8i7r by Molmil
In situ structure of axonemal doublet microtubules in mouse sperm with 48-nm repeat
Descriptor: Cilia and flagella-associated protein 77, Cilia- and flagella-associated protein 107, Cilia- and flagella-associated protein 141, ...
Authors:Zhu, Y, Yin, G.L, Tai, L.H, Sun, F.
Deposit date:2023-02-02
Release date:2023-10-11
Last modified:2023-12-06
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:In-cell structural insight into the stability of sperm microtubule doublet.
Cell Discov, 9, 2023
3TG7
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BU of 3tg7 by Molmil
Crystal structure of Adenovirus serotype 5 hexon at 1.6A resolution
Descriptor: Hexon protein
Authors:Zhu, Y, Roszak, A.W, Isaacs, N.W, McVey, J.H, Nicklin, S.A, Baker, A.H.
Deposit date:2011-08-17
Release date:2011-11-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:crystal structure of Adenovirus serotype 5 hexon at 1.6A resolution
To be Published
2F5I
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X-ray structure of spermidine/spermine N1-acetyltransferase (SAT) from Homo sapiens
Descriptor: Diamine acetyltransferase 1
Authors:Zhu, Y.Q, Zhu, D.Y, Vonrhein, C, Wang, D.C.
Deposit date:2005-11-25
Release date:2005-12-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human spermidine/spermine N1-acetyltransferase (hSSAT): the first structure of a new sequence family of transferase homologous superfamily
Proteins, 63, 2006
6JGY
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BU of 6jgy by Molmil
Crystal structure of LASV-GP2 in a post fusion conformation
Descriptor: Pre-glycoprotein polyprotein GP complex
Authors:Zhu, Y, Zhang, X, Chen, B, Ye, S, Zhang, R.
Deposit date:2019-02-15
Release date:2019-09-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.389 Å)
Cite:Crystal Structure of Refolding Fusion Core of Lassa Virus GP2 and Design of Lassa Virus Fusion Inhibitors.
Front Microbiol, 10, 2019
5VFP
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Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
Authors:Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
Deposit date:2017-04-09
Release date:2018-07-18
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VFR
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BU of 5vfr by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
Authors:Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
Deposit date:2017-04-09
Release date:2018-07-18
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VFU
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BU of 5vfu by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
Authors:Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
Deposit date:2017-04-09
Release date:2018-07-18
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VFS
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BU of 5vfs by Molmil
Nucleotide-Driven Triple-State Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
Authors:Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
Deposit date:2017-04-09
Release date:2018-07-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VFT
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BU of 5vft by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
Authors:Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
Deposit date:2017-04-09
Release date:2018-07-18
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VFQ
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BU of 5vfq by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
Authors:Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
Deposit date:2017-04-09
Release date:2018-07-18
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
5VFO
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BU of 5vfo by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
Descriptor: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
Authors:Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
Deposit date:2017-04-08
Release date:2018-07-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
7FB3
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BU of 7fb3 by Molmil
SARS-CoV-2 spike protein in one-RBD weak state after CTSL-treatment
Descriptor: Spike glycoprotein
Authors:Zhu, Y, Tai, L.H, Sun, F.
Deposit date:2021-07-08
Release date:2022-07-13
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Novel sites for Cathepsin L cleavage in SARS-CoV-2 spike guide treatment strategies
To Be Published
7FB0
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BU of 7fb0 by Molmil
SARS-CoV-2 spike protein in closed state
Descriptor: Spike glycoprotein
Authors:Zhu, Y, Tai, L.H, Sun, F.
Deposit date:2021-07-08
Release date:2022-07-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Novel sites for Cathepsin L cleavage in SARS-CoV-2 spike guide treatment strategies
To Be Published
7FB1
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BU of 7fb1 by Molmil
SARS-CoV-2 spike protein in one-RBD open state
Descriptor: Spike glycoprotein
Authors:Zhu, Y, Tai, L.H, Sun, F.
Deposit date:2021-07-08
Release date:2022-07-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Novel sites for Cathepsin L cleavage in SARS-CoV-2 spike guide treatment strategies
To Be Published
7FB4
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BU of 7fb4 by Molmil
SARS-CoV-2 spike protein in two-RBD weak state after CTSL-treatment
Descriptor: Spike glycoprotein
Authors:Zhu, Y, Tai, L.H, Sun, F.
Deposit date:2021-07-08
Release date:2022-07-13
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Novel sites for Cathepsin L cleavage in SARS-CoV-2 spike guide treatment strategies
To Be Published
2WZS
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BU of 2wzs by Molmil
Structure of the Family GH92 Inverting Mannosidase BT3990 from Bacteroides thetaiotaomicron VPI-5482 in complex with Mannoimidazole
Descriptor: (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, CALCIUM ION, GLYCEROL, ...
Authors:Zhu, Y, Suits, M.D.L, Thompson, A, Chavan, S, Dinev, Z, Dumon, C, Smith, N, Moremen, K.W, Xiang, Y, Siriwardena, A, Williams, S.J, Gilbert, H.J, Davies, G.J.
Deposit date:2009-12-02
Release date:2009-12-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mechanistic Insights Into a Ca2+-Dependent Family of A-Mannosidases in a Human Gut Symbiont.
Nat.Chem.Biol., 6, 2010
7WGZ
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BU of 7wgz by Molmil
SARS-CoV-2 spike glycoprotein trimer in open state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Zhu, Y, Tai, L, Yin, G, Sun, F.
Deposit date:2021-12-29
Release date:2023-01-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Novel cleavage sites identified in SARS-CoV-2 spike protein reveal mechanism for cathepsin L-facilitated viral infection and treatment strategies
Cell Discov, 8, 2022
2G3T
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BU of 2g3t by Molmil
Crystal structure of human spermidine/spermine N1-acetyltransferase (hSSAT)
Descriptor: Diamine acetyltransferase 1
Authors:Zhu, Y.Q, Yang, N, Wang, D.C.
Deposit date:2006-02-21
Release date:2006-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of human spermidine/spermine N1-acetyltransferase (hSSAT): the first structure of a new sequence family of transferase homologous superfamily
Proteins, 63, 2006
7WVY
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BU of 7wvy by Molmil
Cryo-EM structure of the human formyl peptide receptor 2 in complex with Abeta42 and Gi2
Descriptor: Amyloid-beta A4 protein, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhu, Y, Lin, X, Zong, X, Han, S, Zhao, Q, Wu, B.
Deposit date:2022-02-11
Release date:2022-04-13
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of FPR2 in recognition of A beta 42 and neuroprotection by humanin.
Nat Commun, 13, 2022

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