Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 532 件

3TBL
DownloadVisualize
BU of 3tbl by Molmil
Structure of Mono-ubiquitinated PCNA: Implications for DNA Polymerase Switching and Okazaki Fragment Maturation
分子名称: Proliferating cell nuclear antigen, Ubiquitin
著者Zhang, Z, Lee, M, Lee, E, Zhang, S.
登録日2011-08-07
公開日2012-05-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.903 Å)
主引用文献Structure of monoubiquitinated PCNA: Implications for DNA polymerase switching and Okazaki fragment maturation.
Cell Cycle, 11, 2012
8DMP
DownloadVisualize
BU of 8dmp by Molmil
Crystal structure of Legionella pneumophila macrodomain effector MavL
分子名称: MavL
著者Zhang, Z, Das, C.
登録日2022-07-08
公開日2023-07-12
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Legionella metaeffector MavL reverses ubiquitin ADP-ribosylation via a conserved arginine-specific macrodomain.
Nat Commun, 15, 2024
8DMU
DownloadVisualize
BU of 8dmu by Molmil
Crystal structure of macrodomain CG3568 from Drosophila melanogaster in complex with ADP-ribose
分子名称: CG3568, CHLORIDE ION, NICKEL (II) ION, ...
著者Zhang, Z, Das, C.
登録日2022-07-08
公開日2023-07-12
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Legionella metaeffector MavL reverses ubiquitin ADP-ribosylation via a conserved arginine-specific macrodomain.
Nat Commun, 15, 2024
3G0G
DownloadVisualize
BU of 3g0g by Molmil
Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinone inhibitor 3
分子名称: 2-({2-[(3R)-3-aminopiperidin-1-yl]-5-bromo-6-oxopyrimidin-1(6H)-yl}methyl)benzonitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhang, Z, Wallace, M.B, Feng, J, Stafford, J.A, Kaldor, S.W, Shi, L, Skene, R.J, Aertgeerts, K, Lee, B, Jennings, A, Xu, R, Kassel, D, Webb, D.R, Gwaltney, S.L.
登録日2009-01-27
公開日2010-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Design and Synthesis of Pyrimidinone and Pyrimidinedione Inhibitors of Dipeptidyl Peptidase IV.
J.Med.Chem., 54, 2011
8DMS
DownloadVisualize
BU of 8dms by Molmil
Crystal structure of Legionella pneumophila macrodomain MavL in complex with ubiquitin vinyl methyl ester soaked with ADP-ribose
分子名称: CITRATE ANION, METHYL 4-AMINOBUTANOATE, MavL, ...
著者Zhang, Z, Das, C.
登録日2022-07-08
公開日2023-07-12
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Legionella metaeffector MavL reverses ubiquitin ADP-ribosylation via a conserved arginine-specific macrodomain.
Nat Commun, 15, 2024
8DMR
DownloadVisualize
BU of 8dmr by Molmil
Legionella macrodomain effector MavL R370A in complex with ADP-ribose
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MavL, ...
著者Zhang, Z, Das, C.
登録日2022-07-08
公開日2023-07-12
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Legionella metaeffector MavL reverses ubiquitin ADP-ribosylation via a conserved arginine-specific macrodomain.
Nat Commun, 15, 2024
8DMQ
DownloadVisualize
BU of 8dmq by Molmil
Crystal structure of Legionella pneumophila macrodomain MavL in complex with ubiquitin vinyl methyl ester
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, METHYL 4-AMINOBUTANOATE, ...
著者Zhang, Z, Das, C.
登録日2022-07-08
公開日2023-07-12
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2.195 Å)
主引用文献Legionella metaeffector MavL reverses ubiquitin ADP-ribosylation via a conserved arginine-specific macrodomain.
Nat Commun, 15, 2024
3G1W
DownloadVisualize
BU of 3g1w by Molmil
Crystal structure of sugar ABC transporter (sugar-binding protein) from Bacillus halodurans
分子名称: Sugar ABC transporter
著者Zhang, Z, Eswaramoorthy, S, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-01-30
公開日2009-02-17
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献The crystal structure of sugar ABC transporter (sugar-binding protein) from Bacillus halodurans.
To be Published
8DMT
DownloadVisualize
BU of 8dmt by Molmil
Crystal structure of macrodomain CG2909 from Drosophila melanogaster in complex with ADP-ribose
分子名称: RE54994p, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Zhang, Z, Das, C.
登録日2022-07-08
公開日2023-08-02
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Legionella metaeffector MavL reverses ubiquitin ADP-ribosylation via a conserved arginine-specific macrodomain.
Nat Commun, 15, 2024
3D8V
DownloadVisualize
BU of 3d8v by Molmil
Crystal structure of GlmU from Mycobacterium tuberculosis in complex with uridine-diphosphate-N-acetylglucosamine
分子名称: Bifunctional protein glmU, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Zhang, Z, Squire, C.J, Baker, E.N.
登録日2008-05-25
公開日2009-03-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structure and function of GlmU from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 65, 2009
3G0D
DownloadVisualize
BU of 3g0d by Molmil
Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinedione inhibitor 2
分子名称: 2-({8-[(3R)-3-AMINOPIPERIDIN-1-YL]-1,3-DIMETHYL-2,6-DIOXO-1,2,3,6-TETRAHYDRO-7H-PURIN-7-YL}METHYL)BENZONITRILE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhang, Z, Wallace, M.B, Feng, J, Stafford, J.A, Kaldor, S.W, Shi, L, Skene, R.J, Aertgeerts, K, Lee, B, Jennings, A, Xu, R, Kassel, D, Webb, D.R, Gwaltney, S.L.
登録日2009-01-27
公開日2010-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Design and Synthesis of Pyrimidinone and Pyrimidinedione Inhibitors of Dipeptidyl Peptidase IV.
J.Med.Chem., 54, 2011
3GBT
DownloadVisualize
BU of 3gbt by Molmil
Crystal structure of gluconate kinase from Lactobacillus acidophilus
分子名称: Gluconate kinase
著者Zhang, Z, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-02-20
公開日2009-03-10
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure of gluconate kinase from Lactobacillus acidophilus
To be Published
3G0C
DownloadVisualize
BU of 3g0c by Molmil
Crystal structure of dipeptidyl peptidase IV in complex with a pyrimidinedione inhibitor 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7-(2-chlorobenzyl)-1,3-dimethyl-8-piperazin-1-yl-3,7-dihydro-1H-purine-2,6-dione, ...
著者Zhang, Z, Wallace, M.B, Feng, J, Stafford, J.A, Kaldor, S.W, Shi, L, Skene, R.J, Aertgeerts, K, Lee, B, Jennings, A, Xu, R, Kassel, D, Webb, D.R, Gwaltney, S.L.
登録日2009-01-27
公開日2010-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Design and Synthesis of Pyrimidinone and Pyrimidinedione Inhibitors of Dipeptidyl Peptidase IV.
J.Med.Chem., 54, 2011
3EAF
DownloadVisualize
BU of 3eaf by Molmil
Crystal structure of ABC transporter, substrate binding protein Aeropyrum pernix
分子名称: ABC transporter, substrate binding protein, GLYCEROL, ...
著者Zhang, Z, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-08-25
公開日2008-09-09
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of ABC transporter, substrate binding protein Aeropyrum pernix
To be Published
3G0B
DownloadVisualize
BU of 3g0b by Molmil
Crystal structure of dipeptidyl peptidase IV in complex with TAK-322
分子名称: 2-({6-[(3R)-3-aminopiperidin-1-yl]-3-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl}methyl)benzonitrile, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhang, Z, Wallace, M.B, Feng, J, Stafford, J.A, Kaldor, S.W, Shi, L, Skene, R.J, Aertgeerts, K, Lee, B, Jennings, A, Xu, R, Kassel, D, Webb, D.R, Gwaltney, S.L.
登録日2009-01-27
公開日2010-02-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Design and Synthesis of Pyrimidinone and Pyrimidinedione Inhibitors of Dipeptidyl Peptidase IV.
J.Med.Chem., 54, 2011
3GG4
DownloadVisualize
BU of 3gg4 by Molmil
The crystal structure of glycerol kinase from Yersinia pseudotuberculosis
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, glycerol kinase
著者Zhang, Z, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-02-27
公開日2009-03-31
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of glycerol kinase from Yersinia pseudotuberculosis
To be Published
3GV1
DownloadVisualize
BU of 3gv1 by Molmil
Crystal structure of disulfide interchange protein from Neisseria gonorrhoeae
分子名称: BENZOIC ACID, Disulfide interchange protein
著者Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-03-30
公開日2009-04-14
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of disulfide interchange protein from Neisseria gonorrhoeae
To be Published
2QKX
DownloadVisualize
BU of 2qkx by Molmil
N-acetyl glucosamine 1-phosphate uridyltransferase from Mycobacterium tuberculosis complex with N-acetyl glucosamine 1-phosphate
分子名称: 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, Bifunctional protein glmU
著者Zhang, Z, Squire, C.J, Baker, E.N, TB Structural Genomics Consortium (TBSGC)
登録日2007-07-11
公開日2008-07-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure and function of GlmU from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 65, 2009
3RL7
DownloadVisualize
BU of 3rl7 by Molmil
Crystal structure of hDLG1-PDZ1 complexed with APC
分子名称: 11-mer peptide from Adenomatous polyposis coli protein, Disks large homolog 1
著者Zhang, Z, Li, H, Wu, G.
登録日2011-04-19
公開日2011-12-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular basis for the recognition of adenomatous polyposis coli by the Discs Large 1 protein.
Plos One, 6, 2011
6K9H
DownloadVisualize
BU of 6k9h by Molmil
Human LXR-beta in complex with an agonist
分子名称: Oxysterols receptor LXR-beta, ~{tert}-butyl (2'~{S},3~{S})-2-oxidanylidene-2'-phenyl-spiro[1~{H}-indole-3,3'-pyrrolidine]-1'-carboxylate
著者Zhang, Z, Zhou, H.
登録日2019-06-15
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Discovery of new LXR beta agonists as glioblastoma inhibitors.
Eur.J.Med.Chem., 194, 2020
6K10
DownloadVisualize
BU of 6k10 by Molmil
Non substrate bound state of Staphylococcus Aureus AldH
分子名称: 1,2-ETHANEDIOL, Aldehyde dehydrogenase
著者Zhang, Z, Tao, X.
登録日2019-05-08
公開日2020-05-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.78962183 Å)
主引用文献Structural Insight into the Substrate Gating Mechanism by Staphylococcus aureus Aldehyde Dehydrogenase
CCS Chemistry, 2, 2020
6K9G
DownloadVisualize
BU of 6k9g by Molmil
Human LXR-beta in complex with an agonist
分子名称: Oxysterols receptor LXR-beta, ~{tert}-butyl (2'~{R},3~{R})-2'-[3-[4-(hydroxymethyl)-3-methylsulfonyl-phenyl]phenyl]-2-oxidanylidene-spiro[1~{H}-indole-3,3'-pyrrolidine]-1'-carboxylate
著者Zhang, Z, Zhou, H.
登録日2019-06-15
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Discovery of new LXR beta agonists as glioblastoma inhibitors.
Eur.J.Med.Chem., 194, 2020
6K0Z
DownloadVisualize
BU of 6k0z by Molmil
Substrate bound state of Staphylococcus Aureus AldH
分子名称: 1,2-ETHANEDIOL, Aldehyde dehydrogenase, GLYCEROL
著者Zhang, Z, Tao, X.
登録日2019-05-08
公開日2020-05-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.4967258 Å)
主引用文献Structural Insight into the Substrate Gating Mechanism by Staphylococcus aureus Aldehyde Dehydrogenase
CCS Chemistry, 2, 2020
2KKA
DownloadVisualize
BU of 2kka by Molmil
Human telomere DNA two-tetrad quadruplex structure in K+ solution
分子名称: 5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*IP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3'
著者Zhang, Z, Dai, J, Yang, D.
登録日2009-06-16
公開日2009-12-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of a two-G-tetrad intramolecular G-quadruplex formed by a variant human telomeric sequence in K+ solution: insights into the interconversion of human telomeric G-quadruplex structures.
Nucleic Acids Res., 38, 2010
3RL8
DownloadVisualize
BU of 3rl8 by Molmil
Crystal structure of hDLG1-PDZ2 complexed with APC
分子名称: 11-mer peptide from Adenomatous polyposis coli protein, Disks large homolog 1
著者Zhang, Z, Li, H, Wu, G.
登録日2011-04-19
公開日2011-12-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Molecular basis for the recognition of adenomatous polyposis coli by the Discs Large 1 protein.
Plos One, 6, 2011

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon