Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 723 results

8YRJ
DownloadVisualize
BU of 8yrj by Molmil
Mouse Fc epsilon RI
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, High affinity immunoglobulin epsilon receptor subunit alpha, High affinity immunoglobulin epsilon receptor subunit beta, ...
Authors:Zhang, Z, Yui, M, Ohto, U, Shimizu, T.
Deposit date:2024-03-21
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Mouse Fc epsilon RI
To Be Published
8K7T
DownloadVisualize
BU of 8k7t by Molmil
Mouse Fc epsilon RI in complex with mIgE Fc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, High affinity immunoglobulin epsilon receptor subunit alpha, High affinity immunoglobulin epsilon receptor subunit beta, ...
Authors:Zhang, Z, Yui, M, Ohto, U, Shimizu, T.
Deposit date:2023-07-27
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Mouse Fc epsilon RI in complex withMouse Fc epsilon RI in complex with mIgE Fc mIgE Fc
To Be Published
8DMR
DownloadVisualize
BU of 8dmr by Molmil
Legionella macrodomain effector MavL R370A in complex with ADP-ribose
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MavL, ...
Authors:Zhang, Z, Das, C.
Deposit date:2022-07-08
Release date:2023-07-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure of ADP-ribose-bound Legionella pneumophila macrodomain effector MavL R370A
To Be Published
5H4I
DownloadVisualize
BU of 5h4i by Molmil
Unlinked NS2B-NS3 Protease from Zika Virus in complex with a compound fragment
Descriptor: ACETATE ION, NS2B cofactor, NS3 protease, ...
Authors:Zhang, Z.Z, Li, Y.
Deposit date:2016-10-31
Release date:2016-12-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Crystal structure of unlinked NS2B-NS3 protease from Zika virus
Science, 354, 2016
5ZSE
DownloadVisualize
BU of 5zse by Molmil
Crystal structure of monkey TLR7 in complex with IMDQ and GGUCCC
Descriptor: 1-[[4-(aminomethyl)phenyl]methyl]-2-butyl-imidazo[4,5-c]quinolin-4-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2018-04-28
Release date:2019-01-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structural Analyses of Toll-like Receptor 7 Reveal Detailed RNA Sequence Specificity and Recognition Mechanism of Agonistic Ligands.
Cell Rep, 25, 2018
5ZSF
DownloadVisualize
BU of 5zsf by Molmil
Crystal structure of monkey TLR7 in complex with imiquimod
Descriptor: 1-(2-methylpropyl)imidazo[4,5-c]quinolin-4-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2018-04-28
Release date:2019-01-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Analyses of Toll-like Receptor 7 Reveal Detailed RNA Sequence Specificity and Recognition Mechanism of Agonistic Ligands.
Cell Rep, 25, 2018
5ZSI
DownloadVisualize
BU of 5zsi by Molmil
Crystal structure of monkey TLR7 in complex with CL097
Descriptor: 2-(ethoxymethyl)-1H-imidazo[4,5-c]quinolin-4-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2018-04-28
Release date:2019-01-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Analyses of Toll-like Receptor 7 Reveal Detailed RNA Sequence Specificity and Recognition Mechanism of Agonistic Ligands.
Cell Rep, 25, 2018
8GXN
DownloadVisualize
BU of 8gxn by Molmil
The crystal structure of CsFAOMT2 in complex with SAH
Descriptor: MAGNESIUM ION, S-ADENOSYL-L-HOMOCYSTEINE, caffeyl-CoA-O-methyltransferase
Authors:Zhang, Z.M, Zhou, Y.E, Huang, H.S.
Deposit date:2022-09-20
Release date:2023-09-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Characterization of two O-methyltransferases involved in the biosynthesis of O-methylated catechins in tea plant.
Nat Commun, 14, 2023
8GXO
DownloadVisualize
BU of 8gxo by Molmil
The crystal structure of CsFAOMT1 in complex with SAH
Descriptor: Caffeoyl-CoA O-methyltransferase, MAGNESIUM ION, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Zhang, Z.M, Zhou, Y.E, Huang, H.S.
Deposit date:2022-09-20
Release date:2023-09-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Characterization of two O-methyltransferases involved in the biosynthesis of O-methylated catechins in tea plant.
Nat Commun, 14, 2023
8QP8
DownloadVisualize
BU of 8qp8 by Molmil
Cryo-EM Structure of Pre-B Complex (core part)
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, INOSITOL HEXAKISPHOSPHATE, Pre-mRNA-processing factor 6, ...
Authors:Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Zhong, J, Ludwig, S, Urlaub, H, Kastner, B, Stark, H, Luehrmann, R.
Deposit date:2023-09-30
Release date:2024-05-22
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into the cross-exon to cross-intron spliceosome switch.
Nature, 630, 2024
8QPE
DownloadVisualize
BU of 8qpe by Molmil
Cryo-EM Structure of Pre-B-like Complex (core part)
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, INOSITOL HEXAKISPHOSPHATE, Microfibrillar-associated protein 1, ...
Authors:Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Zhong, J, Ludwig, S, Urlaub, H, Kastner, B, Stark, H, Luehrmann, R.
Deposit date:2023-10-01
Release date:2024-05-22
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the cross-exon to cross-intron spliceosome switch.
Nature, 630, 2024
8QP9
DownloadVisualize
BU of 8qp9 by Molmil
Cryo-EM Structure of Pre-B+AMPPNP Complex (core part)
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, INOSITOL HEXAKISPHOSPHATE, Pre-mRNA-processing factor 6, ...
Authors:Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Zhong, J, Ludwig, S, Urlaub, H, Kastner, B, Stark, H, Luehrmann, R.
Deposit date:2023-09-30
Release date:2024-05-22
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural insights into the cross-exon to cross-intron spliceosome switch.
Nature, 630, 2024
3H1I
DownloadVisualize
BU of 3h1i by Molmil
Stigmatellin and antimycin bound cytochrome bc1 complex from chicken
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-METHYL-BUTYRIC ACID 3-(3-FORMYLAMINO-2-HYDROXY-BENZOYLAMINO)-8-HEPTYL-2,6-DIMETHYL-4,9-DIOXO-[1,5]DIOXONAN-7-YL ESTER, CARDIOLIPIN, ...
Authors:Zhang, Z, Huang, L, Shulmeister, V.M, Chi, Y.I, Kim, K.K, Hung, L.W, Crofts, A.R, Berry, E.A, Kim, S.H.
Deposit date:2009-04-12
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.53 Å)
Cite:Electron Transfer by Domain Movement in Cytochrome Bc1
Nature, 392, 1998
3H1H
DownloadVisualize
BU of 3h1h by Molmil
Cytochrome bc1 complex from chicken
Descriptor: 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, CYTOCHROME C1, ...
Authors:Zhang, Z, Huang, L, Shulmeister, V.M, Chi, Y.I, Kim, K.K, Hung, L.W, Crofts, A.R, Berry, E.A, Kim, S.H.
Deposit date:2009-04-12
Release date:2009-04-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Electron Transfer by Domain Movement in Cytochrome Bc1
Nature, 392, 1998
3BM8
DownloadVisualize
BU of 3bm8 by Molmil
crystal structure of YopH mutant D356A complexed with irreversible inhibitor PVSN
Descriptor: Tyrosine-protein phosphatase yopH, phenyl ethenesulfonate
Authors:Zhang, Z.Y, Liu, S.J.
Deposit date:2007-12-12
Release date:2008-06-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Aryl vinyl sulfonates and sulfones as active site-directed and mechanism-based probes for protein tyrosine phosphatases.
J.Am.Chem.Soc., 130, 2008
1DRY
DownloadVisualize
BU of 1dry by Molmil
CRYSTAL STRUCTURE OF CLAVAMINATE SYNTHASE IN COMPLEX WITH FE(II), 2-OXOGLUTARATE AND N-ALPHA-L-ACETYL ARGININE
Descriptor: 2-OXOGLUTARIC ACID, CLAVAMINATE SYNTHASE 1, FE (II) ION, ...
Authors:Zhang, Z.H, Ren, J, Stammers, D.K, Baldwin, J.E, Harlos, K, Schofield, C.J.
Deposit date:2000-01-06
Release date:2000-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural origins of the selectivity of the trifunctional oxygenase clavaminic acid synthase.
Nat.Struct.Biol., 7, 2000
1DS1
DownloadVisualize
BU of 1ds1 by Molmil
CRYSTAL STRUCTURE OF CLAVAMINATE SYNTHASE IN COMPLEX WITH FE(II) AND 2-OXOGLUTARATE
Descriptor: 2-OXOGLUTARIC ACID, CLAVAMINATE SYNTHASE 1, FE (II) ION, ...
Authors:Zhang, Z.H, Ren, J, Stammers, D.K, Baldwin, J.E, Harlos, K, Schofield, C.J.
Deposit date:2000-01-06
Release date:2000-07-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Structural origins of the selectivity of the trifunctional oxygenase clavaminic acid synthase.
Nat.Struct.Biol., 7, 2000
1DRT
DownloadVisualize
BU of 1drt by Molmil
CRYSTAL STRUCTURE OF CLAVAMINATE SYNTHASE IN COMPLEX WITH FE(II), 2-OXOGLUTARATE AND PROCLAVAMINIC ACID
Descriptor: 2-OXOGLUTARIC ACID, 5-AMINO-3-HYDROXY-2-(2-OXO-AZETIDIN-1-YL)-PENTANOIC ACID, CLAVAMINATE SYNTHASE 1, ...
Authors:Zhang, Z.H, Ren, J, Stammers, D.K, Baldwin, J.E, Harlos, K, Schofield, C.J.
Deposit date:2000-01-06
Release date:2000-07-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural origins of the selectivity of the trifunctional oxygenase clavaminic acid synthase.
Nat.Struct.Biol., 7, 2000
1DS0
DownloadVisualize
BU of 1ds0 by Molmil
CRYSTAL STRUCTURE OF CLAVAMINATE SYNTHASE
Descriptor: ACETATE ION, CLAVAMINATE SYNTHASE 1, SULFATE ION
Authors:Zhang, Z.H, Ren, J, Stammers, D.K, Baldwin, J.E, Harlos, K, Schofield, C.J.
Deposit date:2000-01-06
Release date:2000-07-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural origins of the selectivity of the trifunctional oxygenase clavaminic acid synthase.
Nat.Struct.Biol., 7, 2000
5Y28
DownloadVisualize
BU of 5y28 by Molmil
Crystal structure of H. pylori HtrA with PDZ2 deletion
Descriptor: 1,2-ETHANEDIOL, Periplasmic serine endoprotease DegP-like, UNK-UNK-UNK-UNK
Authors:Zhang, Z, Huang, Q, Tao, X.
Deposit date:2017-07-24
Release date:2018-08-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.08606815 Å)
Cite:The unique trimeric assembly of the virulence factor HtrA fromHelicobacter pylorioccurs via N-terminal domain swapping.
J.Biol.Chem., 294, 2019
8GUP
DownloadVisualize
BU of 8gup by Molmil
Crystal structure of EsaG from Staphylococcus aureus
Descriptor: CITRIC ACID, Type VII secretion system protein EsaG
Authors:Zhang, Z.M, Wang, Y.J.
Deposit date:2022-09-13
Release date:2022-11-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.298725 Å)
Cite:A toxin-deformation dependent inhibition mechanism in the T7SS toxin-antitoxin system of Gram-positive bacteria.
Nat Commun, 13, 2022
5Y2D
DownloadVisualize
BU of 5y2d by Molmil
Crystal structure of H. pylori HtrA
Descriptor: Periplasmic serine endoprotease DegP-like, UNK-UNK-K-UNK-UNK-UNK-UNK-UNK-UNK-UNK, UNK-UNK-UNK, ...
Authors:Zhang, Z, Huang, Q, Tao, X.
Deposit date:2017-07-25
Release date:2018-08-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.70009851 Å)
Cite:The unique trimeric assembly of the virulence factor HtrA fromHelicobacter pylorioccurs via N-terminal domain swapping.
J.Biol.Chem., 294, 2019
8DMP
DownloadVisualize
BU of 8dmp by Molmil
Crystal structure of Legionella pneumophila macrodomain effector MavL
Descriptor: MavL
Authors:Zhang, Z, Das, C.
Deposit date:2022-07-08
Release date:2023-07-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structure of Legionella pneumophila macrodomain effector MavL
To Be Published
8DMT
DownloadVisualize
BU of 8dmt by Molmil
Crystal structure of macrodomain CG2909 from Drosophila melanogaster in complex with ADP-ribose
Descriptor: RE54994p, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Zhang, Z, Das, C.
Deposit date:2022-07-08
Release date:2023-08-02
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of ADP-ribose-bound Drosophila macrodomain CG2909
To Be Published
5YX2
DownloadVisualize
BU of 5yx2 by Molmil
Crystal structure of DNMT3A-DNMT3L in complex with DNA containing two CpG sites
Descriptor: DNA (25-MER), DNA (cytosine-5)-methyltransferase 3-like, DNA (cytosine-5)-methyltransferase 3A, ...
Authors:Zhang, Z.M, Song, J.
Deposit date:2017-12-01
Release date:2018-01-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.653 Å)
Cite:Structural basis for DNMT3A-mediated de novo DNA methylation.
Nature, 554, 2018

222624

건을2024-07-17부터공개중

PDB statisticsPDBj update infoContact PDBjnumon