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PDB: 276 results

7T91
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Crystal structure of Zinc finger motif 1 and 2 of GLI1 DNA binding region
Descriptor: Isoform 2 of Zinc finger protein GLI1, ZINC ION
Authors:Wu, M, Zhang, S, Augelli-Szanfran, C.E, Boohaker, R.J.
Deposit date:2021-12-17
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of Zinc finger motif 1 and 2 of GLI1 DNA binding region
To Be Published
7V3F
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DENV2_NGC_Fab_C10 28degree (1Fab:3E)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ...
Authors:Shu, B, Zhang, S, Victor, A.K, Ng, T.S, Lok, S.M.
Deposit date:2021-08-10
Release date:2021-12-29
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Human antibody C10 neutralizes by diminishing Zika but enhancing dengue virus dynamics.
Cell, 184, 2021
7V3G
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DENV2_NGC_Fab_C10 28degrees (2Fab:3E)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ...
Authors:Shu, B, Zhang, S, Victor, A.K, Ng, T.S, Lok, S.M.
Deposit date:2021-08-10
Release date:2021-12-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Human antibody C10 neutralizes by diminishing Zika but enhancing dengue virus dynamics.
Cell, 184, 2021
7V3H
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DENV2_NGC_Fab_C10 28degrees (3Fab:3E)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C10 IgG heavy chain variable region, ...
Authors:Shu, B, Zhang, S, Victor, A.K, Ng, T.S, Lok, S.M.
Deposit date:2021-08-10
Release date:2021-12-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Human antibody C10 neutralizes by diminishing Zika but enhancing dengue virus dynamics.
Cell, 184, 2021
7V3I
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DENV2_NGC_Fab_C10 4degrees (3Fab:3E)
Descriptor: Envelope protein E, Fab_C10_heavy_chain, Fab_C10_light_chain, ...
Authors:Shu, B, Zhang, S, Victor, A.K, Ng, T.S, Lok, S.M.
Deposit date:2021-08-10
Release date:2021-12-29
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Human antibody C10 neutralizes by diminishing Zika but enhancing dengue virus dynamics.
Cell, 184, 2021
7V3J
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DENV2:F(ab')2-local
Descriptor: Envelope protein E, Fab_C10_heavy_chain, Fab_C10_light_chain, ...
Authors:Shu, B, Zhang, S, Victor, A.K, Ng, T.S, Lok, S.M.
Deposit date:2021-08-10
Release date:2021-12-29
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Human antibody C10 neutralizes by diminishing Zika but enhancing dengue virus dynamics.
Cell, 184, 2021
7FCD
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BU of 7fcd by Molmil
Structure of the SARS-CoV-2 A372T spike glycoprotein (open)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Wang, X, Zhang, S.
Deposit date:2021-07-14
Release date:2022-01-26
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Loss of Spike N370 glycosylation as an important evolutionary event for the enhanced infectivity of SARS-CoV-2.
Cell Res., 32, 2022
7FCE
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Structure of the SARS-CoV-2 A372T spike glycoprotein (closed)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Wang, X, Zhang, S.
Deposit date:2021-07-14
Release date:2022-01-26
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Loss of Spike N370 glycosylation as an important evolutionary event for the enhanced infectivity of SARS-CoV-2.
Cell Res., 32, 2022
7X4B
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BU of 7x4b by Molmil
Crystal Structure of An Anti-CRISPR Protein
Descriptor: Anti-CRISPR protein (AcrIIC1), SULFATE ION
Authors:Hu, J, Zhang, S, Gao, J.Y, Liu, X, Liu, J.
Deposit date:2022-03-02
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:A redox switch regulates the assembly and anti-CRISPR activity of AcrIIC1.
Nat Commun, 13, 2022
7VUL
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BU of 7vul by Molmil
Structure of Klebsiella Phage P560 depolymerase
Descriptor: Non-contractile tail fiber protein, SULFATE ION
Authors:Li, M, Chen, R, Zhang, S, Zhang, W.
Deposit date:2021-11-02
Release date:2022-11-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structure of Klebsiella Phage P560 depolymerase
To Be Published
7VH2
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BU of 7vh2 by Molmil
Cryo-EM structure of Machupo virus dimeric polymerase L
Descriptor: RNA-directed RNA polymerase L
Authors:Zhang, X, Ma, J, Zhang, S.
Deposit date:2021-09-20
Release date:2021-09-29
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Structure of Machupo virus polymerase in complex with matrix protein Z.
Nat Commun, 12, 2021
7VGQ
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BU of 7vgq by Molmil
Cryo-EM structure of Machupo virus polymerase L in complex with matrix protein Z
Descriptor: Maltose/maltodextrin-binding periplasmic protein,RING finger protein Z, RNA-directed RNA polymerase L, ZINC ION
Authors:Zhang, X, Ma, J, Zhang, S.
Deposit date:2021-09-18
Release date:2021-09-29
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of Machupo virus polymerase in complex with matrix protein Z.
Nat Commun, 12, 2021
7VH1
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Cryo-EM structure of Machupo virus dimeric L-Z complex
Descriptor: Maltose/maltodextrin-binding periplasmic protein,RING finger protein Z, RNA-directed RNA polymerase L, ZINC ION
Authors:Zhang, X, Ma, J, Zhang, S.
Deposit date:2021-09-20
Release date:2021-09-29
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of Machupo virus polymerase in complex with matrix protein Z.
Nat Commun, 12, 2021
7VH3
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BU of 7vh3 by Molmil
Cryo-EM structure of Machupo virus polymerase L
Descriptor: RNA-directed RNA polymerase L
Authors:Ma, J, Zhang, S, Zhang, X.
Deposit date:2021-09-20
Release date:2021-09-29
Last modified:2022-03-02
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of Machupo virus polymerase in complex with matrix protein Z.
Nat Commun, 12, 2021
7X25
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BU of 7x25 by Molmil
MERS-CoV spike complex with S41 neutralizing antibody Fab Class4 (2u1d RBD with 3Fab)
Descriptor: Spike glycoprotein, antibody S41 heavy chain, antibody S41 light chain
Authors:Zeng, J, Zhang, S, Zhou, H, Wang, X.
Deposit date:2022-02-25
Release date:2023-01-18
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Cryoelectron microscopy structures of a human neutralizing antibody bound to MERS-CoV spike glycoprotein.
Front Microbiol, 13, 2022
7VPQ
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Structures of a deltacoronavirus spike protein bound to porcine and human receptors indicate the risk of virus adaptation to humans
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ji, W, Xu, Y, Zhang, S.
Deposit date:2021-10-17
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of a deltacoronavirus spike protein bound to porcine and human receptors.
Nat Commun, 13, 2022
7VPP
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Structures of a deltacoronavirus spike protein bound to porcine and human receptors indicate the risk of virus adaptation to humans
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ji, W, Xu, Y, Zhang, S.
Deposit date:2021-10-17
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structures of a deltacoronavirus spike protein bound to porcine and human receptors.
Nat Commun, 13, 2022
7V5K
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BU of 7v5k by Molmil
MERS S ectodomain trimer in complex with neutralizing antibody 0722 (state 1)
Descriptor: 0722 H, 0722 L, Spike glycoprotein
Authors:Wang, X, Zhao, J, Wang, Z, Zeng, J, Zhang, S, Wang, Y.
Deposit date:2021-08-17
Release date:2022-08-24
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:MERS S ectodomain trimer in complex with neutralizing antibody 0722 (state 1)
to be published
7V5J
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BU of 7v5j by Molmil
MERS S ectodomain trimer in complex with neutralizing antibody 0722(state 2)
Descriptor: 0722 H, 0722 L, Spike glycoprotein
Authors:Wang, X, Zhao, J, Wang, Z, Zeng, J, Zhang, S, Wang, Y.
Deposit date:2021-08-17
Release date:2022-09-21
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:MERS S ectodomain trimer in complex with neutralizing antibody 0722(state 2)
to be published
7V6N
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BU of 7v6n by Molmil
MERS S ectodomain trimer in complex with neutralizing antibody 111 state1
Descriptor: 111 H, 111 L, Spike glycoprotein
Authors:Wang, X, Zhao, J, Wang, Z, Zeng, J, Zhang, S, Wang, Y.
Deposit date:2021-08-20
Release date:2022-09-14
Method:ELECTRON MICROSCOPY (3.99 Å)
Cite:MERS S ectodomain trimer in complex with neutralizing antibody 111 state1
to be published
7V6O
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BU of 7v6o by Molmil
MERS S ectodomain trimer in complex with neutralizing antibody 111 (state 2)
Descriptor: 111 H, 111 L, Spike glycoprotein
Authors:Wang, X, Zhao, J, Wang, Z, Zeng, J, Zhang, S, Wang, Y.
Deposit date:2021-08-20
Release date:2022-09-28
Method:ELECTRON MICROSCOPY (4.56 Å)
Cite:MERS S ectodomain trimer in complex with neutralizing antibody 111 (state 2)
to be published
7XW6
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BU of 7xw6 by Molmil
TSHR-Gs-M22 antibody-ML109 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Duan, J, Xu, P, Luan, X, Ji, Y, Yuan, Q, He, X, Ye, J, Cheng, X, Jiang, H, Zhang, S, Jiang, Y, Xu, H.E.
Deposit date:2022-05-26
Release date:2022-08-17
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Hormone- and antibody-mediated activation of the thyrotropin receptor.
Nature, 609, 2022
7XW5
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TSHR-thyroid stimulating hormone-Gs-ML109 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, Glycoprotein hormones alpha chain, ...
Authors:Duan, J, Xu, P, Luan, X, Ji, Y, Yuan, Q, He, X, Ye, J, Cheng, X, Jiang, H, Zhang, S, Jiang, Y, Xu, H.E.
Deposit date:2022-05-26
Release date:2022-08-24
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Hormone- and antibody-mediated activation of the thyrotropin receptor.
Nature, 609, 2022
7XW7
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TSHR-K1-70 complex
Descriptor: K1-70 scFv, Thyrotropin receptor
Authors:Duan, J, Xu, P, Luan, X, Ji, Y, Yuan, Q, He, X, Ye, J, Cheng, X, Jiang, H, Zhang, S, Jiang, Y, Xu, H.E.
Deposit date:2022-05-26
Release date:2022-08-17
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Hormone- and antibody-mediated activation of the thyrotropin receptor.
Nature, 609, 2022
8SW4
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BG505 GT1.1 SOSIP in complex with NHP Fabs 21N13, 21M20 and RM20A3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 21M20 heavy chain variable region, ...
Authors:Ozorowski, G, Torres, J.L, Zhang, S, Ward, A.B.
Deposit date:2023-05-17
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Neutralizing antibodies induced in non-human primates by germline targeting Env trimer
To Be Published

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PDB entries from 2024-08-28

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