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PDB: 353 results

1TBF
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Catalytic Domain Of Human Phosphodiesterase 5A in Complex with Sildenafil
Descriptor: 5-{2-ETHOXY-5-[(4-METHYLPIPERAZIN-1-YL)SULFONYL]PHENYL}-1-METHYL-3-PROPYL-1H,6H,7H-PYRAZOLO[4,3-D]PYRIMIDIN-7-ONE, GLYCEROL, MAGNESIUM ION, ...
Authors:Zhang, K.Y.J, Card, G.L, Suzuki, Y, Artis, D.R, Fong, D, Gillette, S, Hsieh, D, Neiman, J, West, B.L, Zhang, C, Milburn, M.V, Kim, S.-H, Schlessinger, J, Bollag, G.
Deposit date:2004-05-20
Release date:2004-08-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A Glutamine Switch Mechanism for Nucleotide Selectivity by Phosphodiesterases
Mol.Cell, 15, 2004
6NYF
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BU of 6nyf by Molmil
Helicobacter pylori Vacuolating Cytotoxin A Oligomeric Assembly 1 (OA-1)
Descriptor: Vacuolating cytotoxin autotransporter
Authors:Zhang, K, Zhang, H, Li, S, Au, S, Chiu, W.
Deposit date:2019-02-11
Release date:2019-03-27
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures ofHelicobacter pylorivacuolating cytotoxin A oligomeric assemblies at near-atomic resolution.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
1TAZ
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BU of 1taz by Molmil
Catalytic Domain Of Human Phosphodiesterase 1B
Descriptor: Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B, MAGNESIUM ION, ZINC ION
Authors:Zhang, K.Y.J, Card, G.L, Suzuki, Y, Artis, D.R, Fong, D, Gillette, S, Hsieh, D, Neiman, J, West, B.L, Zhang, C, Milburn, M.V, Kim, S.-H, Schlessinger, J, Bollag, G.
Deposit date:2004-05-19
Release date:2004-08-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:A Glutamine Switch Mechanism for Nucleotide Selectivity by Phosphodiesterases
Mol.Cell, 15, 2004
1T9R
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BU of 1t9r by Molmil
Catalytic Domain Of Human Phosphodiesterase 5A
Descriptor: CITRIC ACID, PHOSPHATE ION, ZINC ION, ...
Authors:Zhang, K.Y.J, Card, G.L, Suzuki, Y, Artis, D.R, Fong, D, Gillette, S, Hsieh, D, Neiman, J, West, B.L, Zhang, C, Milburn, M.V, Kim, S.-H, Schlessinger, J, Bollag, G.
Deposit date:2004-05-18
Release date:2004-08-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Glutamine Switch Mechanism for Nucleotide Selectivity by Phosphodiesterases
Mol.Cell, 15, 2004
1TB5
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BU of 1tb5 by Molmil
Catalytic Domain Of Human Phosphodiesterase 4B In Complex With AMP
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ZINC ION, ...
Authors:Zhang, K.Y.J, Card, G.L, Suzuki, Y, Artis, D.R, Fong, D, Gillette, S, Hsieh, D, Neiman, J, West, B.L, Zhang, C, Milburn, M.V, Kim, S.-H, Schlessinger, J, Bollag, G.
Deposit date:2004-05-19
Release date:2004-08-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A Glutamine Switch Mechanism for Nucleotide Selectivity by Phosphodiesterases
Mol.Cell, 15, 2004
1T9S
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BU of 1t9s by Molmil
Catalytic Domain Of Human Phosphodiesterase 5A in Complex with GMP
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ZINC ION, ...
Authors:Zhang, K.Y.J, Card, G.L, Suzuki, Y, Artis, D.R, Fong, D, Gillette, S, Hsieh, D, Neiman, J, West, B.L, Zhang, C, Milburn, M.V, Kim, S.-H, Schlessinger, J, Bollag, G.
Deposit date:2004-05-18
Release date:2004-08-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Glutamine Switch Mechanism for Nucleotide Selectivity by Phosphodiesterases
Mol.Cell, 15, 2004
5EJO
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BU of 5ejo by Molmil
Crystal structure of the winged helix domain in Chromatin assembly factor 1 subunit p90
Descriptor: Chromatin assembly factor 1 subunit p90
Authors:Zhang, K, Gao, Y, Li, J, Burgess, R, Han, J, Liang, H, Zhang, Z, Liu, Y.
Deposit date:2015-11-02
Release date:2016-03-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A DNA binding winged helix domain in CAF-1 functions with PCNA to stabilize CAF-1 at replication forks
Nucleic Acids Res., 44, 2016
3J1F
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BU of 3j1f by Molmil
Cryo-EM structure of 9-fold symmetric rATcpn-beta in ATP-binding state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Chaperonin beta subunit, MAGNESIUM ION
Authors:Zhang, K, Wang, L, Liu, Y.X, Wang, X, Gao, B, Hu, Z.J, Ji, G, Chan, K.Y, Schulten, K, Dong, Z.Y, Sun, F.
Deposit date:2012-02-06
Release date:2013-08-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Flexible interwoven termini determine the thermal stability of thermosomes.
Protein Cell, 4, 2013
1RLC
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BU of 1rlc by Molmil
CRYSTAL STRUCTURE OF THE UNACTIVATED RIBULOSE 1, 5-BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE COMPLEXED WITH A TRANSITION STATE ANALOG, 2-CARBOXY-D-ARABINITOL 1,5-BISPHOSPHATE
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, RIBULOSE 1,5 BISPHOSPHATE CARBOXYLASE/OXYGENASE (LARGE CHAIN), RIBULOSE 1,5 BISPHOSPHATE CARBOXYLASE/OXYGENASE (SMALL CHAIN)
Authors:Zhang, K.Y.J, Cascio, D, Eisenberg, D.
Deposit date:1993-08-04
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the unactivated ribulose 1,5-bisphosphate carboxylase/oxygenase complexed with a transition state analog, 2-carboxy-D-arabinitol 1,5-bisphosphate.
Protein Sci., 3, 1994
8QQ3
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BU of 8qq3 by Molmil
Streptavidin with a Ni-cofactor
Descriptor: 4-[4-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]butylamino]-~{N}1,~{N}1'-di(quinolin-8-yl)cyclohexane-1,1-dicarboxamide, NICKEL (II) ION, Streptavidin
Authors:Zhang, K, Jakob, R.P, Ward, T.R.
Deposit date:2023-10-03
Release date:2024-02-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An artificial nickel chlorinase based on the biotin-streptavidin technology.
Chem.Commun.(Camb.), 60, 2024
3J1E
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BU of 3j1e by Molmil
Cryo-EM structure of 9-fold symmetric rATcpn-beta in apo state
Descriptor: Chaperonin beta subunit
Authors:Zhang, K, Wang, L, Liu, Y.X, Wang, X, Gao, B, Hu, Z.J, Ji, G, Chan, K.Y, Schulten, K, Dong, Z.Y, Sun, F.
Deposit date:2012-02-06
Release date:2013-08-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.3 Å)
Cite:Flexible interwoven termini determine the thermal stability of thermosomes.
Protein Cell, 4, 2013
6UES
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BU of 6ues by Molmil
Apo SAM-IV Riboswitch
Descriptor: RNA (119-MER)
Authors:Zhang, K, Li, S, Kappel, K, Pintilie, G, Su, Z, Mou, T, Schmid, M, Das, R, Chiu, W.
Deposit date:2019-09-23
Release date:2019-12-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of a 40 kDa SAM-IV riboswitch RNA at 3.7 angstrom resolution.
Nat Commun, 10, 2019
6UET
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BU of 6uet by Molmil
SAM-bound SAM-IV riboswitch
Descriptor: RNA (119-MER), S-ADENOSYLMETHIONINE
Authors:Zhang, K, Li, S, Kappel, K, Pintilie, G, Su, Z, Mou, T, Schmid, M, Das, R, Chiu, W.
Deposit date:2019-09-23
Release date:2019-12-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of a 40 kDa SAM-IV riboswitch RNA at 3.7 angstrom resolution.
Nat Commun, 10, 2019
6VQX
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BU of 6vqx by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF6
Descriptor: AcrF6, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
Authors:Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
Deposit date:2020-02-06
Release date:2020-03-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
3J1B
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BU of 3j1b by Molmil
Cryo-EM structure of 8-fold symmetric rATcpn-alpha in apo state
Descriptor: Chaperonin alpha subunit
Authors:Zhang, K, Wang, L, Liu, Y.X, Wang, X, Gao, B, Hu, Z.J, Ji, G, Chan, K.Y, Schulten, K, Dong, Z.Y, Sun, F.
Deposit date:2012-02-06
Release date:2013-08-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Flexible interwoven termini determine the thermal stability of thermosomes.
Protein Cell, 4, 2013
3J1C
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BU of 3j1c by Molmil
Cryo-EM structure of 9-fold symmetric rATcpn-alpha in apo state
Descriptor: Chaperonin alpha subunit
Authors:Zhang, K, Wang, L, Liu, Y.X, Wang, X, Gao, B, Hu, Z.J, Ji, G, Chan, K.Y, Schulten, K, Dong, Z.Y, Sun, F.
Deposit date:2012-02-06
Release date:2013-08-07
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.1 Å)
Cite:Flexible interwoven termini determine the thermal stability of thermosomes.
Protein Cell, 4, 2013
1RLD
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BU of 1rld by Molmil
SOLID-STATE PHASE TRANSITION IN THE CRYSTAL STRUCTURE OF RIBULOSE 1,5-BIPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE
Descriptor: RIBULOSE 1,5 BISPHOSPHATE CARBOXYLASE/OXYGENASE (LARGE CHAIN), RIBULOSE 1,5 BISPHOSPHATE CARBOXYLASE/OXYGENASE (SMALL CHAIN)
Authors:Zhang, K.Y.J, Eisenberg, D.
Deposit date:1993-12-10
Release date:1994-04-30
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Solid-state phase transition in the crystal structure of ribulose 1,5-bisphosphate carboxylase/oxygenase.
Acta Crystallogr.,Sect.D, 50, 1994
5ADX
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BU of 5adx by Molmil
CryoEM structure of dynactin complex at 4.0 angstrom resolution
Descriptor: ACTIN RELATED PROTEIN 1, ACTIN RELATED PROTEIN 11, ACTIN, ...
Authors:Zhang, K, Urnavicius, L, Diamant, A.G, Motz, C, Schlage, M.A, Yu, M, Patel, N.A, Robinson, C.V, Carter, A.P.
Deposit date:2015-08-24
Release date:2015-12-30
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The Structure of the Dynactin Complex and its Interaction with Dynein.
Science, 347, 2015
6VQV
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BU of 6vqv by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF9
Descriptor: AcrF9, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
Authors:Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
Deposit date:2020-02-06
Release date:2020-03-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VQW
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BU of 6vqw by Molmil
Type I-F CRISPR-Csy complex with its inhibitor AcrF8
Descriptor: AcrF8, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
Authors:Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
Deposit date:2020-02-06
Release date:2020-03-11
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 117, 2020
6N34
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BU of 6n34 by Molmil
Crystal structure of the BTB domain of Human NS1-BP
Descriptor: Influenza virus NS1A-binding protein
Authors:Zhang, K, Shang, G, Padavannil, A, Fontoura, B, Chook, Y.M.
Deposit date:2018-11-14
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural-functional interactions of NS1-BP protein with the splicing and mRNA export machineries for viral and host gene expression.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6N3H
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BU of 6n3h by Molmil
Crystal structure of Kelch domain of the human NS1 binding protein
Descriptor: Influenza virus NS1A-binding protein
Authors:Zhang, K, Shang, G, Padavannil, A, Fontoura, B.M.A, Chook, Y.M.
Deposit date:2018-11-15
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural-functional interactions of NS1-BP protein with the splicing and mRNA export machineries for viral and host gene expression.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7MZ6
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BU of 7mz6 by Molmil
Cryo-EM structure of minimal TRPV1 with 1 perturbed PI
Descriptor: (10R,13S)-16-amino-13-hydroxy-7,13-dioxo-8,12,14-trioxa-13lambda~5~-phosphahexadecan-10-yl hexadecanoate, (2S)-1-(butanoyloxy)-3-{[(R)-hydroxy{[(1r,2R,3S,4S,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoate, SODIUM ION, ...
Authors:Zhang, K, Julius, D, Cheng, Y.
Deposit date:2021-05-24
Release date:2021-09-22
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Cell, 184, 2021
7MZ5
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BU of 7mz5 by Molmil
Cryo-EM structure of RTX-bound full-length TRPV1 in C2 state
Descriptor: SODIUM ION, Transient receptor potential cation channel subfamily V member 1, resiniferatoxin
Authors:Zhang, K, Julius, D, Cheng, Y.
Deposit date:2021-05-24
Release date:2021-09-22
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Cell, 184, 2021
7MZD
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BU of 7mzd by Molmil
Cryo-EM structure of minimal TRPV1 with RTX bound in C2 state
Descriptor: SODIUM ION, Transient receptor potential cation channel subfamily V member 1, resiniferatoxin
Authors:Zhang, K, Julius, D, Cheng, Y.
Deposit date:2021-05-24
Release date:2021-09-22
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Cell, 184, 2021

221051

數據於2024-06-12公開中

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