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PDB: 599 件
3MEX
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BU of 3mex by Molmil
Crystal structure of MexR in oxidized state
分子名称: Multidrug resistance operon repressor
著者Chen, H, Yi, C, Zhang, J, Zhang, W, Yang, C.-G, He, C.
登録日2010-04-01
公開日2010-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insight into the oxidation-sensing mechanism of the antibiotic resistance of regulator MexR
Embo Rep., 11, 2010
5EIG
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BU of 5eig by Molmil
Engineered human cystathionine gamma lyase (E59T, E339V) to deplet cysteine
分子名称: CYSTEINE, Cystathionine gamma-lyase, SULFATE ION
著者Yan, W, Zhang, J.
登録日2015-10-29
公開日2016-11-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Systemic Depletion of Serum L-Cyst(e)ine with an Engineered Human Enzyme Mediates Potent Induction of ROS and Cancer Ablation
To Be Published
2LI6
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BU of 2li6 by Molmil
1H, 13C, and 15N Chemical Shift Assignments for yeast protein
分子名称: SWI/SNF chromatin-remodeling complex subunit SWI1
著者Wang, T, Zhang, J, Tu, X.
登録日2011-08-24
公開日2012-04-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of SWI1 ARID domain from Saccharomyces cerevisiae and its non-specific binding to DNA
Proteins, 2012
2L6K
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BU of 2l6k by Molmil
Solution Structure of a Nonphosphorylated Peptide Recognizing Domain
分子名称: Tensin-like C1 domain-containing phosphatase
著者Dai, K, Liao, S, Zhang, J, Zhang, X, Tu, X.
登録日2010-11-22
公開日2011-10-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of Tensin2 SH2 domain and its phosphotyrosine-independent interaction with DLC-1
Plos One, 6, 2011
7MRL
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BU of 7mrl by Molmil
Structure of HIV-1 matrix domain bound to human tRNALys3
分子名称: HIV-1 matrix domain, MAGNESIUM ION, tRNA Lys3
著者Bou-Nader, C, Zhang, J.
登録日2021-05-07
公開日2021-08-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献HIV-1 matrix-tRNA complex structure reveals basis for host control of Gag localization.
Cell Host Microbe, 29, 2021
7EO7
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BU of 7eo7 by Molmil
Crystal structure of HCoV-NL63 3C-like protease in complex with an inhibitor Shikonin
分子名称: 2-[(1R)-4-methyl-1-oxidanyl-pent-3-enyl]-5,8-bis(oxidanyl)naphthalene-1,4-dione, 3C-like proteinase
著者Gao, H.X, Zhang, Y.T, Zhou, X.L, Zhong, F.L, Li, J, Zhang, J.
登録日2021-04-21
公開日2021-10-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.24916625 Å)
主引用文献Structure-Based Discovery and Structural Basis of a Novel Broad-Spectrum Natural Product against the Main Protease of Coronavirus.
J.Virol., 96, 2022
7A9D
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BU of 7a9d by Molmil
Crystal structure of H12 Haemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
著者Xiong, X, Walker, P, Zhang, J, Gamblin, S, Skehel, J.J.
登録日2020-09-01
公開日2020-12-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Hemagglutinin Structure and Activities.
Cold Spring Harb Perspect Med, 11, 2021
6ZRK
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BU of 6zrk by Molmil
Crystal structure of H8 haemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
著者Xiong, X, Walker, P, Zhang, J, Gamblin, S, Skehel, J.J.
登録日2020-07-13
公開日2020-12-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Hemagglutinin Structure and Activities.
Cold Spring Harb Perspect Med, 11, 2021
6NM5
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BU of 6nm5 by Molmil
F-pilus/MS2 Maturation protein complex
分子名称: (2R)-2,3-dihydroxypropyl ethyl hydrogen (S)-phosphate, Maturation protein, Type IV conjugative transfer system pilin TraA
著者Meng, R, Chang, J, Zhang, J.
登録日2019-01-10
公開日2019-07-24
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Structural basis for the adsorption of a single-stranded RNA bacteriophage.
Nat Commun, 10, 2019
7EO8
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BU of 7eo8 by Molmil
Crystal structure of SARS coronavirus main protease in complex with an inhibitor Shikonin
分子名称: 2-[(1R)-4-methyl-1-oxidanyl-pent-3-enyl]-5,8-bis(oxidanyl)naphthalene-1,4-dione, 3C-like proteinase
著者Zhang, Y.T, Gao, H.X, Zhou, H, Zhong, F.L, Hu, X.H, Zhou, X.L, Lin, C, Wang, Q.S, Li, J, Zhang, J.
登録日2021-04-21
公開日2021-10-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2808516 Å)
主引用文献Structure-Based Discovery and Structural Basis of a Novel Broad-Spectrum Natural Product against the Main Protease of Coronavirus.
J.Virol., 96, 2022
8UCR
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BU of 8ucr by Molmil
PhiCb5 maturation protein with Caulobacter crescentus bNY30a pili
分子名称: Flp family type IVb pilin, Maturation protein
著者Wang, Y, Zhang, J.
登録日2023-09-27
公開日2024-05-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (6.45 Å)
主引用文献Structural mechanisms of Tad pilus assembly and its interaction with an RNA virus.
Sci Adv, 10, 2024
8UEJ
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BU of 8uej by Molmil
ssRNA phage PhiCb5 virion
分子名称: CALCIUM ION, Coat protein, Maturation protein
著者Wang, Y, Zhang, J.
登録日2023-10-01
公開日2024-05-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural mechanisms of Tad pilus assembly and its interaction with an RNA virus.
Sci Adv, 10, 2024
8U2B
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BU of 8u2b by Molmil
Cryo-EM structure of C.crescentus bNY30a pilus complex
分子名称: Flp family type IVb pilin
著者Wang, Y, Zhang, J.
登録日2023-09-05
公開日2024-05-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (0.86 Å)
主引用文献Structural mechanisms of Tad pilus assembly and its interaction with an RNA virus.
Sci Adv, 10, 2024
7DQZ
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BU of 7dqz by Molmil
Crystal structure of SARS 3C-like protease in apo form
分子名称: 3C-like proteinase
著者Zhang, Y.T, Gao, H.X, Zhou, H, Zhong, F.L, Hu, X.H, Zhou, X.L, Lin, C, Wang, Q.S, Li, J, Zhang, J.
登録日2020-12-24
公開日2021-09-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structure-Based Discovery and Structural Basis of a Novel Broad-Spectrum Natural Product against the Main Protease of Coronavirus.
J.Virol., 96, 2022
2JXW
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BU of 2jxw by Molmil
Solution Structure of the Tandem WW Domains of FBP21
分子名称: WW domain-binding protein 4
著者Huang, X, Zhang, J, Wu, J, Shi, Y.
登録日2007-11-30
公開日2008-12-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and function of the two tandem WW domains of the pre-mRNA splicing factor FBP21 (formin-binding protein 21)
J.Biol.Chem., 284, 2009
2M80
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BU of 2m80 by Molmil
Solution structure of yeast dithiol glutaredoxin Grx8
分子名称: Glutaredoxin-8
著者Tang, Y, Zhang, J, Yu, J, Wu, J, Zhou, C.Z, Shi, Y.
登録日2013-05-02
公開日2014-05-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure-guided activity enhancement and catalytic mechanism of yeast grx8
Biochemistry, 53, 2014
8GJN
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BU of 8gjn by Molmil
17B10 fab in complex with up-RBD of SARS-CoV-2 Spike G614 trimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of 17B10 Fab, Light chain of 17B10 Fab, ...
著者Kwon, H.J, Zhang, J, Kosikova, M, Tang, W.C, Rodriguez, U.O, Peng, H.Q, Meseda, C.A, Pedro, C.L, Schmeisser, F, Lu, J.M, Zhou, B, Davis, C.T, Wentworth, D.E, Chen, W.H, Shriver, M.C, Pasetti, M.F, Weir, J.P, Chen, B, Xie, H.
登録日2023-03-16
公開日2023-04-05
最終更新日2023-04-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Distinct in vitro and in vivo neutralization profiles of monoclonal antibodies elicited by the receptor binding domain of the ancestral SARS-CoV-2.
J Med Virol, 95, 2023
8GJM
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BU of 8gjm by Molmil
17b10 fab in complex with full-length SARS-CoV-2 Spike G614 trimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kwon, H.J, Zhang, J, Kosikova, M, Tang, W.C, Rodriguez, U.O, Peng, H.Q, Meseda, C.A, Pedro, C.L, Schmeisser, F, Lu, J.M, Zhou, B, Davis, C.T, Wentworth, D.E, Chen, W.H, Shriver, M.C, Pasetti, M.F, Weir, J.P, Chen, B, Xie, H.
登録日2023-03-16
公開日2023-04-05
最終更新日2023-04-19
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Distinct in vitro and in vivo neutralization profiles of monoclonal antibodies elicited by the receptor binding domain of the ancestral SARS-CoV-2.
J Med Virol, 95, 2023
8DSG
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BU of 8dsg by Molmil
P411-PFA carbene transferase
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cytochrome P450-BM3 variant P411-PFA, ...
著者Maggiolo, A.O, Porter, N.J, Zhang, J, Arnold, F.H.
登録日2022-07-22
公開日2023-03-08
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Chemodivergent C(sp 3 )-H and C(sp 2 )-H Cyanomethylation Using Engineered Carbene Transferases.
Nat Catal, 6, 2023
6JJP
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BU of 6jjp by Molmil
Crystal structure of Fab of a PD-1 monoclonal antibody MW11-h317 in complex with PD-1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of MW11-h317, Programmed cell death protein 1, ...
著者Wang, M, Wang, J, Wang, R, Jiao, S, Wang, S, Zhang, J, Zhang, M.
登録日2019-02-26
公開日2019-10-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Identification of a monoclonal antibody that targets PD-1 in a manner requiring PD-1 Asn58 glycosylation.
Commun Biol, 2, 2019
2GIB
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BU of 2gib by Molmil
Crystal structure of the SARS coronavirus nucleocapsid protein dimerization domain
分子名称: Nucleocapsid protein, SULFATE ION
著者Yu, I.M, Oldham, M.L, Zhang, J, Chen, J.
登録日2006-03-28
公開日2006-04-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of the severe acute respiratory syndrome (SARS) coronavirus nucleocapsid protein dimerization domain reveals evolutionary linkage between corona- and arteriviridae.
J.Biol.Chem., 281, 2006
3NFC
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BU of 3nfc by Molmil
Crystal structure of E.coli MazF Toxin
分子名称: PemK-like protein 1
著者Wang, X, Wang, K, Su, X, Zhang, J.
登録日2010-06-10
公開日2011-06-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Biochemical and Structural Analysis of E. coli MazF Toxin
To be Published
2PPH
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BU of 2pph by Molmil
solution structure of human MEKK3 PB1 domain
分子名称: Mitogen-activated protein kinase kinase kinase 3
著者Hu, Q, Zhang, J, Wu, J, Shi, Y.
登録日2007-04-30
公開日2007-05-22
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Insight into the Binding Properties of MEKK3 PB1 to MEK5 PB1 from Its Solution Structure.
Biochemistry, 46, 2007
5ITT
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BU of 5itt by Molmil
Crystal Structure of Human NEIL1 bound to duplex DNA containing THF
分子名称: DNA (26-MER), Endonuclease 8-like 1, GLYCEROL
著者Zhu, C, Lu, L, Zhang, J, Yue, Z, Song, J, Zong, S, Liu, M, Stovicek, O, Gao, Y, Yi, C.
登録日2016-03-17
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Tautomerization-dependent recognition and excision of oxidation damage in base-excision DNA repair
Proc.Natl.Acad.Sci.USA, 113, 2016
5ITU
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BU of 5itu by Molmil
Crystal Structure of Human NEIL1(242K) bound to duplex DNA containing THF
分子名称: DNA (5'-D(*CP*GP*TP*CP*CP*AP*CP*GP*TP*CP*TP*AP*C)-3'), DNA (5'-D(*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*G)-3'), Endonuclease 8-like 1
著者Zhu, C, Lu, L, Zhang, J, Yue, Z, Song, J, Zong, S, Liu, M, Stovicek, O, Gao, Y, Yi, C.
登録日2016-03-17
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Tautomerization-dependent recognition and excision of oxidation damage in base-excision DNA repair
Proc.Natl.Acad.Sci.USA, 113, 2016

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