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PDB: 1643 件

1RBY
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Human GAR Tfase complex structure with 10-(trifluoroacetyl)-5,10-dideazaacyclic-5,6,7,8-tetrahydrofolic acid and substrate beta-GAR
分子名称: GLYCINAMIDE RIBONUCLEOTIDE, N-{4-[(1R)-4-[(2R,4R,5S)-2,4-DIAMINO-6-OXOHEXAHYDROPYRIMIDIN-5-YL]-1-(2,2,2-TRIFLUORO-1,1-DIHYDROXYETHYL)BUTYL]BENZOYL}-D-GLUTAMIC ACID, PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE
著者Zhang, Y, Desharnais, J, Boger, D.L, Wilson, I.A.
登録日2003-11-03
公開日2005-06-14
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Human GAR Tfase complex structure
To be Published
2KHT
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BU of 2kht by Molmil
NMR Structure of human alpha defensin HNP-1
分子名称: Neutrophil defensin 1
著者Zhang, Y, Li, S, Doherty, T.F, Lubkowski, J, Lu, W, Li, J, Barinka, C, Hong, M.
登録日2009-04-11
公開日2010-02-09
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献Resonance assignment and three-dimensional structure determination of a human alpha-defensin, HNP-1, by solid-state NMR.
J.Mol.Biol., 397, 2010
8IHT
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BU of 8iht by Molmil
Rpd3S bound to the nucleosome
分子名称: CALCIUM ION, Chromatin modification-related protein EAF3, DNA (164-MER), ...
著者Zhang, Y, Gang, C.
登録日2023-02-23
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献Structural basis for nucleosome binding and catalysis by the yeast Rpd3S/HDAC holoenzyme.
Cell Res., 33, 2023
8IHM
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BU of 8ihm by Molmil
Eaf3 CHD domain bound to the nucleosome
分子名称: Chromatin modification-related protein EAF3, DNA (164-MER), DNA (165-MER), ...
著者Zhang, Y, Gang, C.
登録日2023-02-23
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Structural basis for nucleosome binding and catalysis by the yeast Rpd3S/HDAC holoenzyme.
Cell Res., 33, 2023
8IHN
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BU of 8ihn by Molmil
Cryo-EM structure of the Rpd3S core complex
分子名称: CALCIUM ION, Chromatin modification-related protein EAF3, Histone H3, ...
著者Zhang, Y, Gang, C.
登録日2023-02-23
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Structural basis for nucleosome binding and catalysis by the yeast Rpd3S/HDAC holoenzyme.
Cell Res., 33, 2023
2KNQ
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BU of 2knq by Molmil
Solution structure of E.Coli GspH
分子名称: General secretion pathway protein H
著者Zhang, Y, Jin, C.
登録日2009-08-31
公開日2010-09-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of GspH
To be Published
6JJF
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BU of 6jjf by Molmil
Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*GP*GP*CP*TP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3'), POTASSIUM ION, ...
著者Zhang, Y.S, EI Omari, K, Duman, R, Wagner, A, Parkinson, G.N, Wei, D.G.
登録日2019-02-25
公開日2020-02-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Native de novo structural determinations of non-canonical nucleic acid motifs by X-ray crystallography at long wavelengths.
Nucleic Acids Res., 48, 2020
2LD5
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BU of 2ld5 by Molmil
Solution NMR-derived complex structure of Hoxa13 DNA binding domain bound to DNA
分子名称: DNA (5'-D(*CP*AP*AP*AP*TP*AP*AP*AP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*TP*TP*TP*AP*TP*TP*TP*G)-3'), Homeobox protein Hox-A13
著者Zhang, Y.
登録日2011-05-14
公開日2011-08-10
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for sequence specific DNA binding and protein dimerization of HOXA13.
Plos One, 6, 2011
2LLO
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BU of 2llo by Molmil
Solution NMR-derived structure of calmodulin N-lobe bound with ER alpha peptide
分子名称: CALCIUM ION, Calmodulin, Estrogen receptor
著者Zhang, Y.
登録日2011-11-15
公開日2012-02-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for Ca2+-induced activation and dimerization of estrogen receptor alpha by calmodulin.
J.Biol.Chem., 287, 2012
3LC8
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BU of 3lc8 by Molmil
Crystal structure of the cytoplasmic tail of (pro)renin receptor as a MBP fusion (Maltose-free form)
分子名称: GLYCEROL, MAGNESIUM ION, Maltose-binding periplasmic protein, ...
著者Zhang, Y, Garavito, R.M.
登録日2010-01-10
公開日2011-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis of the intracellular domain of (pro)renin receptor fused to maltose-binding protein.
Biochem.Biophys.Res.Commun., 407, 2011
2AA0
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BU of 2aa0 by Molmil
Crystal structure of T. gondii adenosine kinase complexed with 6-methylmercaptopurine riboside
分子名称: 2-HYDROXYMETHYL-5-(6-METHYLSULFANYL-PURIN-9-YL)-TETRAHYDRO-FURAN-3,4-DIOL, ACETATE ION, CHLORIDE ION, ...
著者Zhang, Y, el Kouni, M.H, Ealick, S.E.
登録日2005-07-13
公開日2006-07-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Substrate analogs induce an intermediate conformational change in Toxoplasma gondii adenosine kinase
Acta Crystallogr.,Sect.D, 63, 2007
2AB8
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BU of 2ab8 by Molmil
Crystal structure of T. gondii adenosine kinase complexed with 6-methylmercaptopurine riboside and AMP-PCP
分子名称: 2-HYDROXYMETHYL-5-(6-METHYLSULFANYL-PURIN-9-YL)-TETRAHYDRO-FURAN-3,4-DIOL, CHLORIDE ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Zhang, Y, el Kouni, M.H, Ealick, S.E.
登録日2005-07-14
公開日2006-07-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Substrate analogs induce an intermediate conformational change in Toxoplasma gondii adenosine kinase
Acta Crystallogr.,Sect.D, 63, 2007
1FKC
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BU of 1fkc by Molmil
HUMAN PRION PROTEIN (MUTANT E200K) FRAGMENT 90-231
分子名称: PRION PROTEIN
著者Zhang, Y, Swietnicki, W, Zagorski, M.G, Surewicz, W.K, Soennichsen, F.D.
登録日2000-08-09
公開日2000-09-21
最終更新日2018-03-14
実験手法SOLUTION NMR
主引用文献Solution structure of the E200K variant of human prion protein. Implications for the mechanism of pathogenesis in familial prion diseases.
J.Biol.Chem., 275, 2000
2ABS
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BU of 2abs by Molmil
Crystal structure of T. gondii adenosine kinase complexed with AMP-PCP
分子名称: CHLORIDE ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, SODIUM ION, ...
著者Zhang, Y, el Kouni, M.H, Ealick, S.E.
登録日2005-07-16
公開日2006-01-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structure of Toxoplasma gondii adenosine kinase in complex with an ATP analog at 1.1 angstroms resolution.
Acta Crystallogr.,Sect.D, 62, 2006
1FO7
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BU of 1fo7 by Molmil
HUMAN PRION PROTEIN MUTANT E200K FRAGMENT 90-231
分子名称: PRION PROTEIN
著者Zhang, Y, Swietnicki, W, Zagorski, M.G, Surewicz, W.K, Soennichsen, F.D.
登録日2000-08-25
公開日2000-09-21
最終更新日2018-03-14
実験手法SOLUTION NMR
主引用文献Solution structure of the E200K variant of human prion protein. Implications for the mechanism of pathogenesis in familial prion diseases.
J.Biol.Chem., 275, 2000
2PQN
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BU of 2pqn by Molmil
Crystal structure of yeast Fis1 complexed with a fragment of yeast Mdv1
分子名称: Mitochondria fission 1 protein, Mitochondrial division protein 1
著者Zhang, Y, Chan, D.C.
登録日2007-05-02
公開日2007-11-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for recruitment of mitochondrial fission complexes by Fis1.
Proc.Natl.Acad.Sci.USA, 104, 2007
2LLQ
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BU of 2llq by Molmil
Solution nmr-derived structure of calmodulin c-lobe bound with er alpha peptide
分子名称: CALCIUM ION, Calmodulin, Estrogen receptor
著者Zhang, Y.
登録日2011-11-15
公開日2012-02-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for Ca2+-induced activation and dimerization of estrogen receptor alpha by calmodulin.
J.Biol.Chem., 287, 2012
2LRJ
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BU of 2lrj by Molmil
NMR solution structure of staphyloxanthin biosynthesis protein
分子名称: Staphyloxanthin biosynthesis protein, putative
著者Zhang, Y, Winsor, J, Anderson, W, Radhakrishnan, I, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-04-03
公開日2012-04-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a putative S. aureus enzyme involved in the biosynthesis of staphyloxanthin
To be Published
2LBC
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BU of 2lbc by Molmil
solution structure of tandem UBA of USP13
分子名称: Ubiquitin carboxyl-terminal hydrolase 13
著者Zhang, Y, Zhou, C, Zhou, Z, Song, A, Hu, H.
登録日2011-03-29
公開日2012-03-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Domain Analysis Reveals That a Deubiquitinating Enzyme USP13 Performs Non-Activating Catalysis for Lys63-Linked Polyubiquitin.
Plos One, 6, 2011
3LBS
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BU of 3lbs by Molmil
Crystal structure of the cytoplasmic tail of (pro)renin receptor as a MBP fusion (Maltose-bound form)
分子名称: Maltose-binding periplasmic protein, Renin receptor, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Zhang, Y, Garavito, R.M.
登録日2010-01-08
公開日2011-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural analysis of the intracellular domain of (pro)renin receptor fused to maltose-binding protein.
Biochem.Biophys.Res.Commun., 407, 2011
6LTS
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BU of 6lts by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex comprising a truncated sigma finger
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zhang, Y, Ebright, R.H.
登録日2020-01-23
公開日2020-03-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.
Proc.Natl.Acad.Sci.USA, 117, 2020
3TG3
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BU of 3tg3 by Molmil
Crystal structure of the MAPK binding domain of MKP7
分子名称: 1,2-ETHANEDIOL, Dual specificity protein phosphatase 16
著者Zhang, Y.Y, Liu, X, Wu, J.W, Wang, Z.X.
登録日2011-08-17
公開日2012-03-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.675 Å)
主引用文献A Distinct Interaction Mode Revealed by the Crystal Structure of the Kinase p38alpha with the MAPK Binding Domain of the Phosphatase MKP5.
Sci.Signal., 4, 2011
3TG1
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Crystal structure of p38alpha in complex with a MAPK docking partner
分子名称: Dual specificity protein phosphatase 10, Mitogen-activated protein kinase 14
著者Zhang, Y.Y, Wu, J.W, Wang, Z.X.
登録日2011-08-17
公開日2012-03-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献A Distinct Interaction Mode Revealed by the Crystal Structure of the Kinase p38alpha with the MAPK Binding Domain of the Phosphatase MKP5.
Sci.Signal., 4, 2011
2PQR
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BU of 2pqr by Molmil
Crystal structure of yeast Fis1 complexed with a fragment of yeast Caf4
分子名称: GOLD ION, Mitochondria fission 1 protein, WD repeat protein YKR036C
著者Zhang, Y, Chan, D.C.
登録日2007-05-02
公開日2007-11-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural basis for recruitment of mitochondrial fission complexes by Fis1.
Proc.Natl.Acad.Sci.USA, 104, 2007
5V21
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BU of 5v21 by Molmil
Crystal structure of human SETD2 SET-domain in complex with H3K36M peptide and SAM
分子名称: Histone H3K36M peptide, Histone-lysine N-methyltransferase SETD2, S-ADENOSYLMETHIONINE, ...
著者Zhang, Y, Tong, L.
登録日2017-03-02
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.415 Å)
主引用文献Molecular basis for the role of oncogenic histone mutations in modulating H3K36 methylation.
Sci Rep, 7, 2017

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件を2024-06-19に公開中

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