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PDB: 165 件

6PT2
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Crystal structure of the active delta opioid receptor in complex with the peptide agonist KGCHM07
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHOLESTEROL, Delta opioid receptor, ...
著者Claff, T, Yu, J, Blais, V, Patel, N, Martin, C, Wu, L, Han, G.W, Holleran, B.J, Van der Poorten, O, Hanson, M.A, Sarret, P, Gendron, L, Cherezov, V, Katritch, V, Ballet, S, Liu, Z, Muller, C.E, Stevens, R.C.
登録日2019-07-14
公開日2019-12-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Elucidating the active delta-opioid receptor crystal structure with peptide and small-molecule agonists.
Sci Adv, 5, 2019
6PT3
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Crystal structure of the active delta opioid receptor in complex with the small molecule agonist DPI-287
分子名称: 4-[(R)-[(2S,5R)-4-benzyl-2,5-dimethylpiperazin-1-yl](3-hydroxyphenyl)methyl]-N,N-diethylbenzamide, Delta opioid receptor
著者Claff, T, Yu, J, Blais, V, Patel, N, Martin, C, Wu, L, Han, G.W, Holleran, B.J, Van der Poorten, O, Hanson, M.A, Sarret, P, Gendron, L, Cherezov, V, Katritch, V, Ballet, S, Liu, Z, Muller, C.E, Stevens, R.C.
登録日2019-07-14
公開日2019-12-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Elucidating the active delta-opioid receptor crystal structure with peptide and small-molecule agonists.
Sci Adv, 5, 2019
2OWL
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Crystal structure of E. coli RdgC
分子名称: CALCIUM ION, Recombination-associated protein rdgC
著者Briggs, G.S, McEwan, P.A, Yu, J, Moore, T, Emsley, J, Lloyd, R.G.
登録日2007-02-16
公開日2007-03-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Ring Structure of the Escherichia coli DNA-binding Protein RdgC Associated with Recombination and Replication Fork Repair.
J.Biol.Chem., 282, 2007
3D8X
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Crystal Structure of Saccharomyces cerevisiae NDPPH Dependent Thioredoxin Reductase 1
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Thioredoxin reductase 1
著者Zhang, Z.Y, Bao, R, Yu, J, Chen, Y.X, Zhou, C.-Z.
登録日2008-05-26
公開日2008-12-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of Saccharomyces cerevisiae cytoplasmic thioredoxin reductase Trr1 reveals the structural basis for species-specific recognition of thioredoxin
Biochim.Biophys.Acta, 1794, 2009
6M16
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Cryo-EM structures of SADS-CoV spike glycoproteins
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Wang, X, Yu, J, Qiao, S, Guo, R.
登録日2020-02-24
公開日2020-05-27
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Cryo-EM structures of HKU2 and SADS-CoV spike glycoproteins provide insights into coronavirus evolution.
Nat Commun, 11, 2020
6LZH
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Crystal structure of Alpha/beta hydrolase GrgF from Penicillium sp. sh18
分子名称: GrgF, SODIUM ION
著者Wang, H, Yu, J, Wang, W.G, Matsuda, Y, Yao, M.
登録日2020-02-19
公開日2020-06-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular Basis for the Biosynthesis of an Unusual Chain-Fused Polyketide, Gregatin A.
J.Am.Chem.Soc., 142, 2020
6M15
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Cryo-EM structures of HKU2 spike glycoproteins
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Wang, X, Yu, J, Qiao, S, Guo, R.
登録日2020-02-24
公開日2020-05-27
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (2.38 Å)
主引用文献Cryo-EM structures of HKU2 and SADS-CoV spike glycoproteins provide insights into coronavirus evolution.
Nat Commun, 11, 2020
3CMI
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Crystal structure of glutathione-dependent phospholipid peroxidase Hyr1 from the yeast Saccharomyces cerevisiae
分子名称: Peroxiredoxin HYR1
著者Zhang, W.J.Z, He, Y.X, Yu, J, Zhou, C.Z.
登録日2008-03-21
公開日2008-09-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystal structure of glutathione-dependent phospholipid peroxidase Hyr1 from the yeast Saccharomyces cerevisiae
Proteins, 73, 2008
3G60
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Structure of P-glycoprotein Reveals a Molecular Basis for Poly-Specific Drug Binding
分子名称: (4R,11R,18R)-4,11,18-tri(propan-2-yl)-6,13,20-triselena-3,10,17,22,23,24-hexaazatetracyclo[17.2.1.1~5,8~.1~12,15~]tetracosa-1(21),5(24),7,12(23),14,19(22)-hexaene-2,9,16-trione, Multidrug resistance protein 1a
著者Aller, S.G, Yu, J, Ward, A, Weng, Y, Chittaboina, S, Zhuo, R, Harrell, P.M, Trinh, Y.T, Zhang, Q, Urbatsch, I.L, Chang, G.
登録日2009-02-05
公開日2009-03-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.4 Å)
主引用文献Structure of P-glycoprotein reveals a molecular basis for poly-specific drug binding.
Science, 323, 2009
3G5U
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Structure of P-glycoprotein Reveals a Molecular Basis for Poly-Specific Drug Binding
分子名称: MERCURY (II) ION, Multidrug resistance protein 1a
著者Aller, S.G, Yu, J, Ward, A, Weng, Y, Chittaboina, S, Zhuo, R, Harrell, P.M, Trinh, Y.T, Zhang, Q, Urbatsch, I.L, Chang, G.
登録日2009-02-05
公開日2009-03-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structure of P-glycoprotein reveals a molecular basis for poly-specific drug binding.
Science, 323, 2009
3G61
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Structure of P-glycoprotein Reveals a Molecular Basis for Poly-Specific Drug Binding
分子名称: (4S,11S,18S)-4,11,18-tri(propan-2-yl)-6,13,20-triselena-3,10,17,22,23,24-hexaazatetracyclo[17.2.1.1~5,8~.1~12,15~]tetracosa-1(21),5(24),7,12(23),14,19(22)-hexaene-2,9,16-trione, Multidrug resistance protein 1a
著者Aller, S.G, Yu, J, Ward, A, Weng, Y, Chittaboina, S, Zhuo, R, Harrell, P.M, Trinh, Y.T, Zhang, Q, Urbatsch, I.L, Chang, G.
登録日2009-02-05
公開日2009-03-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.35 Å)
主引用文献Structure of P-glycoprotein reveals a molecular basis for poly-specific drug binding.
Science, 323, 2009
3WGM
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STAPHYLOCOCCUS AUREUS FTSZ T7 mutant substituted for GAN bound with GTP, DeltaT7GAN-GTP
分子名称: Cell division protein FtsZ, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
著者Han, X, Matsui, T, Yu, J, Tanaka, I, Yao, M.
登録日2013-08-06
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.091 Å)
主引用文献Structural change in FtsZ Induced by intermolecular interactions between bound GTP and the T7 loop
J.Biol.Chem., 289, 2014
3WBI
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Crystal structure analysis of eukaryotic translation initiation factor 5B structure I
分子名称: Eukaryotic translation initiation factor 5B
著者Zheng, A, Yamamoto, R, Ose, T, Yu, J, Tanaka, I, Yao, M.
登録日2013-05-20
公開日2014-11-19
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献X-ray structures of eIF5B and the eIF5B-eIF1A complex: the conformational flexibility of eIF5B is restricted on the ribosome by interaction with eIF1A
Acta Crystallogr.,Sect.D, 70, 2014
3W77
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Crystal Structure of azoreductase AzrA
分子名称: FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
著者Ogata, D, Yu, J, Ooi, T, Yao, M.
登録日2013-02-27
公開日2014-02-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structures of AzrA and of AzrC complexed with substrate or inhibitor: insight into substrate specificity and catalytic mechanism.
Acta Crystallogr.,Sect.D, 70, 2014
3WGK
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STAPHYLOCOCCUS AUREUS FTSZ T7 mutant substituted for GAG, DeltaT7GAG-GDP
分子名称: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Han, X, Matsui, T, Yu, J, Tanaka, I, Yao, M.
登録日2013-08-06
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.799 Å)
主引用文献Structural change in FtsZ Induced by intermolecular interactions between bound GTP and the T7 loop
J.Biol.Chem., 289, 2014
3W9Z
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Crystal structure of DusC
分子名称: FLAVIN MONONUCLEOTIDE, tRNA-dihydrouridine synthase C
著者Chen, M, Yu, J, Tanaka, Y, Tanaka, I, Yao, M.
登録日2013-04-19
公開日2013-07-31
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of dihydrouridine synthase C (DusC) from Escherichia coli
Acta Crystallogr.,Sect.F, 69, 2013
3WBJ
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Crystal structure analysis of eukaryotic translation initiation factor 5B structure II
分子名称: Eukaryotic translation initiation factor 5B
著者Zheng, A, Yamamoto, R, Ose, T, Yu, J, Tanaka, I, Yao, M.
登録日2013-05-20
公開日2014-11-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.495 Å)
主引用文献X-ray structures of eIF5B and the eIF5B-eIF1A complex: the conformational flexibility of eIF5B is restricted on the ribosome by interaction with eIF1A
Acta Crystallogr.,Sect.D, 70, 2014
3WGL
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STAPHYLOCOCCUS AUREUS FTSZ T7 mutant substituted for GAN bound with GDP, DeltaT7GAN-GDP
分子名称: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Han, X, Matsui, T, Yu, J, Tanaka, I, Yao, M.
登録日2013-08-06
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.066 Å)
主引用文献Structural change in FtsZ Induced by intermolecular interactions between bound GTP and the T7 loop
J.Biol.Chem., 289, 2014
3WBK
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crystal structure analysis of eukaryotic translation initiation factor 5B and 1A complex
分子名称: Eukaryotic translation initiation factor 1A, Eukaryotic translation initiation factor 5B
著者Zheng, A, Yamamoto, R, Ose, T, Yu, J, Tanaka, I, Yao, M.
登録日2013-05-20
公開日2014-11-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献X-ray structures of eIF5B and the eIF5B-eIF1A complex: the conformational flexibility of eIF5B is restricted on the ribosome by interaction with eIF1A
Acta Crystallogr.,Sect.D, 70, 2014
3W79
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Crystal Structure of azoreductase AzrC in complex with sulfone-modified azo dye Orange I
分子名称: 4-[(E)-(4-hydroxynaphthalen-1-yl)diazenyl]benzenesulfonic acid, FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
著者Ogata, D, Yu, J, Ooi, T, Yao, M.
登録日2013-02-27
公開日2014-02-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of AzrA and of AzrC complexed with substrate or inhibitor: insight into substrate specificity and catalytic mechanism.
Acta Crystallogr.,Sect.D, 70, 2014
3K7I
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Crystal structure of the E131K mutant of the Indian Hedgehog N-terminal signalling domain
分子名称: Indian hedgehog protein, SULFATE ION, ZINC ION
著者He, Y.-X, Kang, Y, Zhang, W.J, Yu, J, Ma, G, Zhou, C.-Z.
登録日2009-10-13
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.438 Å)
主引用文献Crystal structure of the E131K mutant of the Indian Hedgehog N-terminal signalling domain
To be Published
3K7H
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Crystal structure of the E95K mutant of the Indian Hedgehog N-terminal signalling domain
分子名称: Indian hedgehog protein, SULFATE ION, ZINC ION
著者He, Y.-X, Kang, Y, Zhang, W.J, Yu, J, Ma, G, Zhou, C.-Z.
登録日2009-10-13
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the E95K mutant of the Indian Hedgehog N-terminal signalling domain
To be Published
3K7G
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Crystal structure of the Indian Hedgehog N-terminal signalling domain
分子名称: GLYCEROL, Indian hedgehog protein, SULFATE ION, ...
著者He, Y.-X, Kang, Y, Zhang, W.J, Yu, J, Ma, G, Zhou, C.-Z.
登録日2009-10-13
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the Indian Hedgehog N-terminal signalling domain
To be Published
3K7J
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Crystal structure of the D100E mutant of the Indian Hedgehog N-terminal signalling domain
分子名称: CARBONATE ION, Indian hedgehog protein, SULFATE ION, ...
著者He, Y.-X, Kang, Y, Zhang, W.J, Yu, J, Ma, G, Zhou, C.-Z.
登録日2009-10-13
公開日2011-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the D100E mutant of the Indian Hedgehog N-terminal signalling domain
To be Published
2KSM
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Central B domain of Rv0899 from Mycobacterium tuberculosis
分子名称: MYCOBACTERIUM TUBERCULOSIS RV0899/MT0922/OmpATb
著者Teriete, P, Yao, Y, Kolodzik, A, Yu, J, Song, H, Niederweis, M, Marassi, F.M.
登録日2010-01-07
公開日2010-02-02
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Mycobacterium tuberculosis Rv0899 adopts a mixed alpha/beta-structure and does not form a transmembrane beta-barrel.
Biochemistry, 49, 2010

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