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PDB: 2430 results

2QYH
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Crystal structure of the hypothetical protein (gk1056) from geobacillus kaustophilus HTA426
Descriptor: GLYCEROL, Hypothetical conserved protein, GK1056
Authors:Jeyakanthan, J, Kanaujia, S.P, Sekar, K, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-08-15
Release date:2008-08-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the hypothetical protein (gk1056) from geobacillus kaustophilus HTA426
To be Published
1UEB
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Crystal structure of translation elongation factor P from Thermus thermophilus HB8
Descriptor: elongation factor P
Authors:Hanawa-Suetsugu, K, Sekine, S, Sakai, H, Hori-Takemoto, C, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-09
Release date:2004-05-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of elongation factor P from Thermus thermophilus HB8
Proc.Natl.Acad.Sci.USA, 101, 2004
2IC7
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Crystal Structure of Maltose Transacetylase from Geobacillus kaustophilus
Descriptor: Maltose transacetylase
Authors:Liu, Z.J, Li, Y, Chen, L, Zhu, J, Rose, J.P, Ebihara, A, Yokoyama, S, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative (RSGI), RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-12
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal Structure of Maltose Transacetylase From Geobacillus kaustophilus at 1.78 Angstrom Resolution
To be Published
2ICU
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Crystal Structure of Hypothetical Protein YedK From Escherichia coli
Descriptor: Hypothetical protein yedK
Authors:Chen, L, Liu, Z.J, Li, Y, Zhao, M, Rose, J, Ebihara, A, Yokoyama, S, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG), RIKEN Structural Genomics/Proteomics Initiative, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-13
Release date:2006-11-07
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Hypothetical Protein YedK From Escherichia coli
To be Published
2IY6
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1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE FROM THERMUS WITH BOUND CITRATE
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE, ...
Authors:Inagaki, E, Sakamoto, K, Nishio, M, Yokoyama, S.
Deposit date:2006-07-13
Release date:2006-07-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Thermus Thermophilus Delta(1)- Pyrroline-5-Carboxylate Dehydrogenase.
J.Mol.Biol., 362, 2006
1UEK
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Crystal structure of 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase
Descriptor: 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase
Authors:Wada, T, Kuramitsu, S, Yokoyama, S, Tame, J.R.H, Park, S.Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-17
Release date:2003-06-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, an Enzyme in the Non-mevalonate Pathway of Isoprenoid Synthesis.
J.Biol.Chem., 278, 2003
2J40
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1-pyrroline-5-carboxylate dehydrogenase from Thermus thermophilus with bound inhibitor L-proline and NAD.
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE, ...
Authors:Inagaki, E, Sakamoto, K, Nishio, M, Yokoyama, S.
Deposit date:2006-08-24
Release date:2007-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Ternary Complex of Delta1-Pyrroline-5-Carboxylate Dehydrogenase with Substrate Mimic and Co-Factoer
To be Published
2J5N
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1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE FROM THERMUS THERMOPHIRUS WITH BOUND INHIBITOR GLYCINE AND NAD.
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE, ...
Authors:Inagaki, E, Sakamoto, K, Nishio, M, Yokoyama, S.
Deposit date:2006-09-19
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal Structure of Ternary Complex of Delta1-Pyrroline-5-Carboxylate Dehydrogenase with Substrate Mimic and Co-Factoer
To be Published
2FC8
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Solution structure of the RRM_1 domain of NCL protein
Descriptor: NCL protein
Authors:Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-12
Release date:2006-06-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RRM_1 domain of NCL protein
To be published
2H9U
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Crystal structure of the archaea specific DNA binding protein
Descriptor: 1,2-ETHANEDIOL, DNA/RNA-binding protein Alba 2
Authors:Kumarevel, T.S, Sakamoto, K, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-06-12
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the archaea specific DNA binding protein from Aeropyrum pernix K1
To be Published
2GQI
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Solution structure of the SH3 domain of human Ras GTPase-activating protein 1
Descriptor: Ras GTPase-activating protein 1
Authors:Kurosaki, C, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-21
Release date:2006-10-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the SH3 domain of human Ras GTPase-activating protein 1
To be Published
2GQH
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Solution structure of the 15th Ig-like domain of human KIAA1556 protein
Descriptor: KIAA1556 protein
Authors:Kurosaki, C, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-21
Release date:2006-10-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 15th Ig-like domain of human KIAA1556 protein
To be Published
2JNS
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Solution structure of the Bromodomain-containing protein 4 ET domain
Descriptor: Bromodomain-containing protein 4
Authors:Lin, Y.J, Padmanabhan, B, Yokoyama, S, Guntert, P, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-01
Release date:2008-02-05
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution structure of the Bromodomain-containing protein 4 ET domain
To be Published
2GZW
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Crystal structure of the E.coli CRP-cAMP complex
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator
Authors:Kumarevel, T.S, Tanaka, T, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-12
Release date:2007-05-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of activated CRP protein from E coli
To be Published
2H0A
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Crystal structure of probable Transcription regulator from Thermus thermophilus
Descriptor: Transcriptional regulator
Authors:Kumarevel, T.S, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-14
Release date:2007-05-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of TTHA0807, a CcpA regulator, from Thermus thermophilus HB8.
Proteins, 2009
2GQJ
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Solution structure of the two zf-C2H2 like domains(493-575) of human zinc finger protein KIAA1196
Descriptor: ZINC ION, Zinc finger protein KIAA1196
Authors:Kurosaki, C, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-21
Release date:2006-10-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the two zf-C2H2 like domains(493-575) of human zinc finger protein KIAA1196
To be Published
2H09
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Crystal structure of diphtheria toxin repressor like protein from E. coli
Descriptor: Transcriptional regulator mntR
Authors:Kumarevel, T.S, Tanaka, T, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-05-14
Release date:2007-05-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the manganese transport regulatory protein from Escherichia coli.
Proteins, 2009
1V66
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Solution structure of human p53 binding domain of PIAS-1
Descriptor: Protein inhibitor of activated STAT protein 1
Authors:Okubo, S, Hara, F, Tsuchida, Y, Shimotakahara, S, Suzuki, S, Hatanaka, H, Yokoyama, S, Tanaka, H, Yasuda, H, Shindo, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-27
Release date:2004-12-07
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of the N-terminal domain of SUMO ligase PIAS1 and its interaction with tumor suppressor p53 and A/T-rich DNA oligomers
J.Biol.Chem., 279, 2004
1IQ0
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THERMUS THERMOPHILUS ARGINYL-TRNA SYNTHETASE
Descriptor: ARGINYL-TRNA SYNTHETASE
Authors:Shimada, A, Nureki, O, Goto, M, Takahashi, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-05-24
Release date:2001-11-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and mutational studies of the recognition of the arginine tRNA-specific major identity element, A20, by arginyl-tRNA synthetase.
Proc.Natl.Acad.Sci.USA, 98, 2001
2HOW
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Dipeptidase (PH0974) from Pyrococcus horikoshii OT3
Descriptor: 356aa long hypothetical dipeptidase
Authors:Jeyakanthan, J, Yokoyama, S, Shiro, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-17
Release date:2007-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dipeptidase (PH0974) from Pyrococcus Horikoshii Ot3
To be Published
2HOQ
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Crystal structure of the probable haloacid dehalogenase (PH1655) from pyrococcus horikoshii OT3
Descriptor: Putative HAD-hydrolase PH1655
Authors:Jeyakanthan, J, Shinkai, A, Yokoyama, S, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-16
Release date:2007-07-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Probable Haloacid Dehalogenase Protein (Ph1655) from Pyrococcus Horikoshii OT3
To be Published
2KBO
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Structure, interaction, and real-time monitoring of the enzymatic reaction of wild type APOBEC3G
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Furukawa, A, Nagata, T, Matsugami, A, Habu, Y, Sugiyama, R, Hayashi, F, Kobayashi, N, Yokoyama, S, Takaku, H, Katahira, M.
Deposit date:2008-12-04
Release date:2009-02-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure, interaction and real-time monitoring of the enzymatic reaction of wild-type APOBEC3G
Embo J., 28, 2009
2GGF
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Solution structure of the MA3 domain of human Programmed cell death 4
Descriptor: Programmed cell death 4, isoform 1
Authors:Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-24
Release date:2007-04-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the MA3 domain of human Programmed cell death 4
To be Published
2FYH
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Solution structure of the 2'-5' RNA ligase-like protein from Pyrococcus furiosus
Descriptor: putative integral membrane transport protein
Authors:Okada, K, Matsuda, T, Sakamoto, T, Muto, Y, Yokoyama, S, Kanai, A, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-08
Release date:2007-02-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Characterization of a heat-stable enzyme possessing GTP-dependent RNA ligase activity from a hyperthermophilic archaeon, Pyrococcus furiosus
Rna, 15, 2009
1HZD
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CRYSTAL STRUCTURE OF HUMAN AUH PROTEIN, AN RNA-BINDING HOMOLOGUE OF ENOYL-COA HYDRATASE
Descriptor: AU-BINDING PROTEIN/ENOYL-COA HYDRATASE
Authors:Kurimoto, K, Fukai, S, Nureki, O, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-01-24
Release date:2001-12-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of human AUH protein, a single-stranded RNA binding homolog of enoyl-CoA hydratase.
Structure, 9, 2001

224004

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