4S3H
 
 | | Crystal structure of S. pombe Mdb1 FHA domain | | Descriptor: | Mdb1, SULFATE ION | | Authors: | Luo, S, Ye, K. | | Deposit date: | 2015-01-26 | | Release date: | 2015-07-22 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (2.701 Å) | | Cite: | Dimerization Mediated by a Divergent Forkhead-associated Domain Is Essential for the DNA Damage and Spindle Functions of Fission Yeast Mdb1.
J.Biol.Chem., 290, 2015
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4DIX
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4DJG
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4DOZ
 | | Crystal structure of Pyrococcus furiosus Cmr2 (Cas10) | | Descriptor: | Putative uncharacterized protein, ZINC ION | | Authors: | Zhu, X, Ye, K. | | Deposit date: | 2012-02-12 | | Release date: | 2012-03-21 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Crystal structure of Cmr2 suggests a nucleotide cyclase-related enzyme in type III CRISPR-Cas systems
Febs Lett., 586, 2012
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4J0X
 | | Structure of Rrp9 | | Descriptor: | Ribosomal RNA-processing protein 9 | | Authors: | Zhang, L, Lin, J, Ye, K. | | Deposit date: | 2013-01-31 | | Release date: | 2013-06-05 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.502 Å) | | Cite: | Structural and functional analysis of the U3 snoRNA binding protein Rrp9.
Rna, 19, 2013
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4NSX
 | | Crystal Structure of the Utp21 tandem WD Domain | | Descriptor: | CITRATE ANION, U3 small nucleolar RNA-associated protein 21 | | Authors: | Zhang, C, Ye, K. | | Deposit date: | 2013-11-29 | | Release date: | 2014-02-19 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Structure of Utp21 Tandem WD Domain Provides Insight into the Organization of the UTPB Complex Involved in Ribosome Synthesis
Plos One, 9, 2014
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4J0W
 | | Structure of U3-55K | | Descriptor: | U3 small nucleolar RNA-interacting protein 2 | | Authors: | Zhang, L, Lin, J, Ye, K. | | Deposit date: | 2013-01-31 | | Release date: | 2013-06-05 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (1.7 Å) | | Cite: | Structural and functional analysis of the U3 snoRNA binding protein Rrp9.
Rna, 19, 2013
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4M5D
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4QMF
 | | Structure of the Krr1 and Faf1 complex from Saccharomyces cerevisiae | | Descriptor: | KRR1 small subunit processome component, Protein FAF1 | | Authors: | Zheng, S, Ye, K. | | Deposit date: | 2014-06-16 | | Release date: | 2014-07-09 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (2.804 Å) | | Cite: | Interaction between ribosome assembly factors Krr1 and Faf1 is essential for formation of small ribosomal subunit in yeast
J.Biol.Chem., 289, 2014
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4MJ7
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6LQV
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6LQT
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6LQQ
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2F3W
 | | solution structure of 1-110 fragment of staphylococcal nuclease in 2M TMAO | | Descriptor: | Thermonuclease | | Authors: | Liu, D, Xie, T, Feng, Y, Shan, L, Ye, K, Wang, J. | | Deposit date: | 2005-11-22 | | Release date: | 2006-12-05 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Folding stability and cooperativity of the three forms of 1-110 residues fragment of staphylococcal nuclease
Biophys.J., 92, 2007
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6LQU
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9BCE
 | | Shewanella oneidensis LysR family regulator SO0839 regulatory domain | | Descriptor: | Transcriptional regulator LysR family | | Authors: | Han, S.R, Liang, H.H, Lin, Z.H, Fan, Y.L, Ye, K, Gao, H.G, Tao, Y.J, Jin, M. | | Deposit date: | 2024-04-08 | | Release date: | 2024-11-20 | | Method: | X-RAY DIFFRACTION (1.4 Å) | | Cite: | A bacterial transcription activator dedicated to the expression of the enzyme catalyzing the first committed step in fatty acid biosynthesis
Nucleic Acids Res., 2024
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6LZ1
 | | Structure of S.pombe alpha-mannosidase Ams1 | | Descriptor: | Ams1, ZINC ION | | Authors: | Zhang, J, Ye, K. | | Deposit date: | 2020-02-17 | | Release date: | 2020-09-09 | | Last modified: | 2024-03-27 | | Method: | ELECTRON MICROSCOPY (3.2 Å) | | Cite: | Cryo-EM structure of fission yeast tetrameric alpha-mannosidase Ams1.
Febs Open Bio, 10, 2020
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2F3V
 | | Solution structure of 1-110 fragment of staphylococcal nuclease with V66W mutation | | Descriptor: | Thermonuclease | | Authors: | Liu, D, Xie, T, Feng, Y, Shan, L, Ye, K, Wang, J. | | Deposit date: | 2005-11-22 | | Release date: | 2006-12-05 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Folding stability and cooperativity of the three forms of 1-110 residues fragment of staphylococcal nuclease
Biophys.J., 92, 2007
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6LQP
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9JA6
 | | Cryo-EM structure of Tdk1 tetramer complex | | Descriptor: | Meiotically up-regulated gene 135 protein,Immunoglobulin G-binding protein G | | Authors: | Zhang, J, Ye, K. | | Deposit date: | 2024-08-24 | | Release date: | 2024-11-13 | | Method: | ELECTRON MICROSCOPY (4.4 Å) | | Cite: | Structural duality enables a single protein to act as a toxin-antidote pair for meiotic drive.
Proc.Natl.Acad.Sci.USA, 121, 2024
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9JA5
 | | Cryo-EM structure of Tdk1-Bdf1 complex | | Descriptor: | Meiotically up-regulated gene 135 protein,SWR1 complex bromodomain subunit bdf1,Immunoglobulin G-binding protein G | | Authors: | Zhang, J, Ye, K. | | Deposit date: | 2024-08-24 | | Release date: | 2024-11-13 | | Method: | ELECTRON MICROSCOPY (2.7 Å) | | Cite: | A meiotic driver hijacks an epigenetic reader to disrupt mitosis in noncarrier offspring.
Proc.Natl.Acad.Sci.USA, 121, 2024
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5YDU
 | | Crystal structure of Utp30 | | Descriptor: | PHOSPHATE ION, Ribosome biogenesis protein UTP30 | | Authors: | Hu, J, Zhu, X, Ye, K. | | Deposit date: | 2017-09-14 | | Release date: | 2017-11-01 | | Last modified: | 2024-03-27 | | Method: | X-RAY DIFFRACTION (2.646 Å) | | Cite: | Structure and RNA recognition of ribosome assembly factor Utp30.
RNA, 23, 2017
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5GIP
 | | Crystal structure of box C/D RNP with 13 nt guide regions and 11 nt substrates | | Descriptor: | 50S ribosomal protein L7Ae, C/D RNA, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit, ... | | Authors: | Yang, Z, Lin, J, Ye, K. | | Deposit date: | 2016-06-24 | | Release date: | 2016-09-14 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (3.129 Å) | | Cite: | Box C/D guide RNAs recognize a maximum of 10 nt of substrates
Proc.Natl.Acad.Sci.USA, 113, 2016
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5GIO
 | | Crystal structure of box C/D RNP with 12 nt guide regions and 13 nt substrates | | Descriptor: | 50S ribosomal protein L7Ae, C/D RNA, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit, ... | | Authors: | Yang, Z, Lin, J, Ye, K. | | Deposit date: | 2016-06-24 | | Release date: | 2016-09-14 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (3.604 Å) | | Cite: | Box C/D guide RNAs recognize a maximum of 10 nt of substrates
Proc.Natl.Acad.Sci.USA, 113, 2016
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2LUA
 | | Solution structure of CXC domain of MSL2 | | Descriptor: | Protein male-specific lethal-2, ZINC ION | | Authors: | Feng, Y, Ye, K, Zheng, S, Wang, J. | | Deposit date: | 2012-06-09 | | Release date: | 2012-10-17 | | Last modified: | 2024-05-01 | | Method: | SOLUTION NMR | | Cite: | Solution Structure of MSL2 CXC Domain Reveals an Unusual Zn(3)Cys(9) Cluster and Similarity to Pre-SET Domains of Histone Lysine Methyltransferases.
Plos One, 7, 2012
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