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9JA6

Cryo-EM structure of Tdk1 tetramer complex

Summary for 9JA6
Entry DOI10.2210/pdb9ja6/pdb
EMDB information61291
DescriptorMeiotically up-regulated gene 135 protein,Immunoglobulin G-binding protein G (1 entity in total)
Functional Keywordssignaling protein, meiotic cell cycle, cell cycle
Biological sourceSchizosaccharomyces pombe 972h- (Fission yeast)
More
Total number of polymer chains4
Total formula weight153746.72
Authors
Zhang, J.,Ye, K. (deposition date: 2024-08-24, release date: 2024-11-13)
Primary citationHua, Y.,Zhang, J.,Yang, M.Y.,Ren, J.Y.,Suo, F.,Liang, L.,Dong, M.Q.,Ye, K.,Du, L.L.
Structural duality enables a single protein to act as a toxin-antidote pair for meiotic drive.
Proc.Natl.Acad.Sci.USA, 121:e2408618121-e2408618121, 2024
Cited by
PubMed Abstract: In sexual reproduction, selfish genetic elements known as killer meiotic drivers (KMDs) bias inheritance by eliminating gametes that do not carry them. The selective killing behavior of most KMDs can be explained by a toxin-antidote model, where a toxin harms all gametes while an antidote provides resistance to the toxin in carriers. This study investigates whether and how the KMD element in the fission yeast deploys this strategy. Intriguingly, relies on a single protein product, Tdk1, for both killing and resistance. We show that Tdk1 exists in a nontoxic tetrameric form during vegetative growth and meiosis but transforms into a distinct toxic form in spores. This toxic form acquires the ability to interact with the histone reader Bdf1 and assembles into supramolecular foci that disrupt mitosis in noncarriers after spore germination. In contrast, Tdk1 synthesized during germination of carrier spores is nontoxic and acts as an antidote, dismantling the preformed toxic Tdk1 assemblies. Replacement of the N-terminal region of Tdk1 with a tetramer-forming peptide reveals its dual roles in imposing an autoinhibited tetrameric conformation and facilitating the assembly of supramolecular foci when autoinhibition is released. Moreover, we successfully reconstituted a functional KMD element by combining a construct that exclusively expresses Tdk1 during meiosis ("toxin-only") with another construct that expresses Tdk1 specifically during germination ("antidote-only"). This work uncovers a remarkable example of a single protein employing structural duality to form a toxin-antidote pair, expanding our understanding of the mechanisms underlying toxin-antidote systems.
PubMed: 39485800
DOI: 10.1073/pnas.2408618121
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (4.4 Å)
Structure validation

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