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PDB: 297 results

6VOC
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BU of 6voc by Molmil
icosahedral symmetry reconstruction of brome mosaic virus (RNA 3+4)
Descriptor: Capsid protein
Authors:Beren, C, Cui, Y.X, Chakravarty, A, Yang, X, Rao, A.L.N, Knobler, C.M, Zhou, Z.H, Gelbart, W.M.
Deposit date:2020-01-30
Release date:2020-05-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Genome organization and interaction with capsid protein in a multipartite RNA virus.
Proc.Natl.Acad.Sci.USA, 117, 2020
1NOQ
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BU of 1noq by Molmil
e-motif structure
Descriptor: 5'-D(*CP*CP*GP*CP*CP*G)-3'
Authors:Zheng, M, Huang, X, Smith, G.K, Yang, X, Gao, X.
Deposit date:2003-01-16
Release date:2003-02-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Genetically unstable CXG repeats are structurally dynamic and have a high propensity for folding. An NMR and UV spectroscopic study.
J.Mol.Biol., 264, 1996
9EZG
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BU of 9ezg by Molmil
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with 5-((4-((2-aminoethyl)(ethyl)amino)-3-(4H-1,2,4-triazol-4-yl)phenyl)amino)-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile
Descriptor: 1,2-ETHANEDIOL, 5-[[4-[2-azanylethyl(ethyl)amino]-3-(1,2,4-triazol-4-yl)phenyl]amino]-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidine-3-carbonitrile, Casein kinase II subunit alpha, ...
Authors:Kraemer, A, Ong, H.W, Yang, X, Brown, J.W, Chang, E, Willson, T, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2024-04-12
Release date:2024-07-31
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:More than an Amide Bioisostere: Discovery of 1,2,4-Triazole-containing Pyrazolo[1,5- a ]pyrimidine Host CSNK2 Inhibitors for Combatting beta-Coronavirus Replication.
J.Med.Chem., 67, 2024
8ZTR
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BU of 8ztr by Molmil
The dimer complex of DSR2 and tube-forming domain of phage tail tube protein
Descriptor: Bacillus phage SPR Tube protein, SIR2-like domain-containing protein
Authors:Zheng, J, Yang, X.
Deposit date:2024-06-07
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structural insights into autoinhibition and activation of defense-associated sirtuin protein.
Int.J.Biol.Macromol., 277, 2024
8YLT
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BU of 8ylt by Molmil
The structure of DSR2 and NAD+ complex
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SIR2-like domain-containing protein
Authors:Zheng, J, Yang, X.
Deposit date:2024-03-06
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural insights into autoinhibition and activation of defense-associated sirtuin protein.
Int.J.Biol.Macromol., 277, 2024
8YLN
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BU of 8yln by Molmil
The structure of DSR2-Tail tube complex
Descriptor: Bacillus phage SPR Tube protein, SIR2-like domain-containing protein
Authors:Zheng, J, Yang, X.
Deposit date:2024-03-06
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Structural insights into autoinhibition and activation of defense-associated sirtuin protein.
Int.J.Biol.Macromol., 277, 2024
8Z18
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BU of 8z18 by Molmil
The tetramer complex of DSR2 and tube-forming domain of phage tail tube protein
Descriptor: Bacillus phage SPR Tube protein, SIR2-like domain-containing protein
Authors:Zheng, J, Yang, X.
Deposit date:2024-04-10
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.94 Å)
Cite:Structural insights into autoinhibition and activation of defense-associated sirtuin protein.
Int.J.Biol.Macromol., 277, 2024
8YKF
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BU of 8ykf by Molmil
The DSR2-DSAD1 complex with DSAD1 on the opposite sides
Descriptor: DSAD1, SIR2-like domain-containing protein
Authors:Zheng, J, Yang, X.
Deposit date:2024-03-05
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural insights into autoinhibition and activation of defense-associated sirtuin protein.
Int.J.Biol.Macromol., 277, 2024
3SLU
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BU of 3slu by Molmil
Crystal structure of NMB0315
Descriptor: M23 peptidase domain protein, NICKEL (II) ION
Authors:Shen, Y, Wang, X, Yang, X, Xu, H.
Deposit date:2011-06-26
Release date:2012-02-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal structure of outer membrane protein NMB0315 from Neisseria meningitidis.
Plos One, 6, 2011
4Q2J
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BU of 4q2j by Molmil
A novel structure-based mechanism for DNA-binding of SATB1
Descriptor: DNA-binding protein SATB1
Authors:Wang, Z, Long, J, Yang, X, Shen, Y.
Deposit date:2014-04-08
Release date:2015-03-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Crystal structure of the ubiquitin-like domain-CUT repeat-like tandem of special AT-rich sequence binding protein 1 (SATB1) reveals a coordinating DNA-binding mechanism.
J.Biol.Chem., 289, 2014
4ZM6
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BU of 4zm6 by Molmil
A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase
Descriptor: ACETYL COENZYME *A, N-acetyl-beta-D glucosaminidase, SULFATE ION
Authors:Qin, Z, Xiao, Y, Yang, X, Jiang, Z, Yang, S, Mesters, J.R.
Deposit date:2015-05-02
Release date:2015-12-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain glycoside hydrolase family 3 beta-N-acetylglucosaminidase
Sci Rep, 5, 2015
5EAZ
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BU of 5eaz by Molmil
crystal form I of YfiB belonging to space groups P21
Descriptor: SULFATE ION, YfiB
Authors:Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
Deposit date:2015-10-17
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
5EB3
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BU of 5eb3 by Molmil
VB6-bound protein
Descriptor: 4,5-bis(hydroxymethyl)-2-methyl-pyridin-3-ol, SULFATE ION, YfiR
Authors:Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
Deposit date:2015-10-17
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
5EB0
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BU of 5eb0 by Molmil
crystal form II of YfiB belonging to P41
Descriptor: SULFATE ION, YfiB
Authors:Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
Deposit date:2015-10-17
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
5EB2
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BU of 5eb2 by Molmil
Trp-bound YfiR
Descriptor: SULFATE ION, TRYPTOPHAN, YfiR
Authors:Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
Deposit date:2015-10-17
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.709 Å)
Cite:Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
5EB1
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BU of 5eb1 by Molmil
the YfiB-YfiR complex
Descriptor: SULFATE ION, YfiB, YfiR
Authors:Xu, M, Yang, X, Yang, X.-A, Zhou, L, Liu, T.-Z, Fan, Z, Jiang, T.
Deposit date:2015-10-17
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the regulatory mechanism of the Pseudomonas aeruginosa YfiBNR system
Protein Cell, 7, 2016
5Z0R
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BU of 5z0r by Molmil
Structural insight into the Zika virus capsid encapsulating the viral genome
Descriptor: Extracellular solute-binding protein family 1,viral genome protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Li, T, Zhao, Q, Yang, X, Chen, C, Yang, K, Wu, C, Zhang, T, Duan, Y, Xue, X, Mi, K, Ji, X, Wang, Z, Yang, H.
Deposit date:2017-12-20
Release date:2018-04-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural insight into the Zika virus capsid encapsulating the viral genome.
Cell Res., 28, 2018
4ROU
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BU of 4rou by Molmil
Auto-inhibition Mechanism of Human Mitochondrial RNase P Protein Complex
Descriptor: CHLORIDE ION, Mitochondrial ribonuclease P protein 3, ZINC ION
Authors:Li, F, Liu, X, Yang, X, Shen, Y.
Deposit date:2014-10-29
Release date:2015-11-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.713 Å)
Cite:Auto-inhibition Mechanism of Human Mitochondrial RNase P Protein Complex
TO BE PUBLISHED
4RYL
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BU of 4ryl by Molmil
Human Protein Arginine Methyltransferase 3 in complex with 1-isoquinolin-6-yl-3-[2-oxo-2-(pyrrolidin-1-yl)ethyl]urea
Descriptor: 1-isoquinolin-6-yl-3-[2-oxo-2-(pyrrolidin-1-yl)ethyl]urea, PRMT3 protein, UNKNOWN ATOM OR ION
Authors:Dong, A, Dobrovetsky, E, Kaniskan, H.U, Szewczyk, M, Yu, Z, Eram, M.S, Yang, X, Schmidt, K, Luo, X, Dai, M, He, F, Zang, I, Lin, Y, Kennedy, S, Li, F, Tempel, W, Smil, D, Min, S.J, Landon, M, Lin-Jones, J, Huang, X.P, Roth, B.L, Schapira, M, Atadja, P, Barsyte-Lovejoy, D, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Brown, P.J, Zhao, K, Jin, J, Vedadi, M, Structural Genomics Consortium (SGC)
Deposit date:2014-12-15
Release date:2015-02-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Potent, Selective and Cell-Active Allosteric Inhibitor of Protein Arginine Methyltransferase 3 (PRMT3).
Angew.Chem.Int.Ed.Engl., 54, 2015
1NBS
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BU of 1nbs by Molmil
Crystal structure of the specificity domain of Ribonuclease P RNA
Descriptor: LEAD (II) ION, MAGNESIUM ION, RIBONUCLEASE P RNA
Authors:Krasilnikov, A.S, Yang, X, Pan, T, Mondragon, A.
Deposit date:2002-12-03
Release date:2003-02-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal structure of the specificity domain of Ribonuclease P
Nature, 421, 2003
5Z0V
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BU of 5z0v by Molmil
Structural insight into the Zika virus capsid encapsulating the viral genome
Descriptor: Extracellular solute-binding protein family 1,viral genome protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Li, T, Zhao, Q, Yang, X, Chen, C, Yang, K, Wu, C, Zhang, T, Duan, Y, Xue, X, Mi, K, Ji, X, Wang, Z, Yang, H.
Deposit date:2017-12-21
Release date:2018-04-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.913 Å)
Cite:Structural insight into the Zika virus capsid encapsulating the viral genome.
Cell Res., 28, 2018
2OV2
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BU of 2ov2 by Molmil
The crystal structure of the human RAC3 in complex with the CRIB domain of human p21-activated kinase 4 (PAK4)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Ugochukwu, E, Yang, X, Elkins, J.M, Burgess-Brown, N, Bunkoczi, G, Debreczeni, J.E.D, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A, von Delft, F, Knapp, S, Doyle, D.A, Structural Genomics Consortium (SGC)
Deposit date:2007-02-12
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of the human RAC3 in complex with the CRIB domain of human p21-activated kinase 4 (PAK4)
To be Published
2QME
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BU of 2qme by Molmil
Crystal structure of human RAC3 in complex with CRIB domain of human p21-activated kinase 1 (PAK1)
Descriptor: CRIB domain of the Serine/threonine-protein kinase PAK 1, GLYCEROL, MAGNESIUM ION, ...
Authors:Ugochukwu, E, Yang, X, Elkins, J.M, Burgess-Brown, N, Bunkoczi, G, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A, von Delft, F, Knapp, S, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2007-07-16
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of the human RAC3 in complex with the CRIB domain of human p21-activated kinase 1 (PAK1).
To be Published
2QG1
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BU of 2qg1 by Molmil
Crystal structure of the 11th PDZ domain of MPDZ (MUPP1)
Descriptor: 1,2-ETHANEDIOL, Multiple PDZ domain protein
Authors:Papagrigoriou, E, Salah, E, Phillips, C, Savitsky, P, Boisguerin, P, Oschkinat, H, Gileadi, C, Yang, X, Elkins, J.M, Ugochukwu, E, Bunkoczi, G, Uppenberg, J, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A, von Delft, F, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2007-06-28
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the 11th PDZ domain of MPDZ (MUPP1).
To be Published
2ODB
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BU of 2odb by Molmil
The crystal structure of human cdc42 in complex with the CRIB domain of human p21-activated kinase 6 (PAK6)
Descriptor: CHLORIDE ION, Human Cell Division Cycle 42 (CDC42), MAGNESIUM ION, ...
Authors:Ugochukwu, E, Yang, X, Elkins, J, Soundararajan, M, Pike, A.C.W, Eswaran, J, Burgess, N, Debreczeni, J.E, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, Gileadi, O, von Delft, F, Knapp, S, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2006-12-22
Release date:2007-01-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of human cdc42 in complex with the CRIB domain of human p21-activated kinase 6 (PAK6)
To be Published

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