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PDB: 290 件
5WPU
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Crystal structure HpiC1 Y101S
分子名称: 12-epi-hapalindole C/U synthase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION
著者Newmister, S.A, Li, S, Garcia-Borras, M, Sanders, J.N, Yang, S, Lowell, A.N, Yu, F, Smith, J.L, Williams, R.M, Houk, K.N, Sherman, D.H.
登録日2017-08-07
公開日2018-03-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Structural basis of the Cope rearrangement and cyclization in hapalindole biogenesis.
Nat. Chem. Biol., 14, 2018
5WPS
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Crystal structure HpiC1 Y101F
分子名称: 1,2-ETHANEDIOL, 12-epi-hapalindole C/U synthase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Newmister, S.A, Li, S, Garcia-Borras, M, Sanders, J.N, Yang, S, Lowell, A.N, Yu, F, Smith, J.L, Williams, R.M, Houk, K.N, Sherman, D.H.
登録日2017-08-07
公開日2018-04-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.389 Å)
主引用文献Structural basis of the Cope rearrangement and cyclization in hapalindole biogenesis.
Nat. Chem. Biol., 14, 2018
7YDX
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Crystal structure of human RIPK1 kinase domain in complex with compound RI-962
分子名称: 1-methyl-5-[2-(2-methylpropanoylamino)-[1,2,4]triazolo[1,5-a]pyridin-7-yl]-N-[(1S)-1-phenylethyl]indole-3-carboxamide, IODIDE ION, Receptor-interacting serine/threonine-protein kinase 1
著者Zhang, L, Wang, Y, Li, Y, Wu, C, Luo, X, Wang, T, Lei, J, Yang, S.
登録日2022-07-04
公開日2023-04-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.642 Å)
主引用文献Generative deep learning enables the discovery of a potent and selective RIPK1 inhibitor.
Nat Commun, 13, 2022
8JOP
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Crystal structure of the SARS-CoV-2 main protease in complex with 11a
分子名称: 3C-like proteinase nsp5, methyl (6~{R})-5-ethanoyl-7-oxidanylidene-6-[4-(trifluoromethyl)phenyl]-8,9,10,11-tetrahydro-6~{H}-benzo[b][1,4]benzodiazepine-2-carboxylate
著者Zeng, R, Liu, Y.Z, Wang, F.L, Yang, S.Y, Lei, J.
登録日2023-06-08
公開日2023-08-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Discovery of benzodiazepine derivatives as a new class of covalent inhibitors of SARS-CoV-2 main protease.
Bioorg.Med.Chem.Lett., 92, 2023
8GUD
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Cryo-EM structure of cancer-specific PI3Kalpha mutant E545K in complex with BYL-719
分子名称: (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Liu, X, Zhou, Q, Hart, J.R, Xu, Y, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
登録日2022-09-11
公開日2022-11-23
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Cryo-EM structures of cancer-specific helical and kinase domain mutations of PI3K alpha.
Proc.Natl.Acad.Sci.USA, 119, 2022
8GUB
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Cryo-EM structure of cancer-specific PI3Kalpha mutant H1047R in complex with BYL-719
分子名称: (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Liu, X, Zhou, Q, Hart, J.R, Xu, Y, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
登録日2022-09-11
公開日2022-11-23
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Cryo-EM structures of cancer-specific helical and kinase domain mutations of PI3K alpha.
Proc.Natl.Acad.Sci.USA, 119, 2022
8GUA
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Cryo-EM structure of cancer-specific PI3Kalpha mutant E542K in complex with BYL-719
分子名称: (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Liu, X, Zhou, Q, Hart, J.R, Xu, Y, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
登録日2022-09-11
公開日2022-12-07
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Cryo-EM structures of cancer-specific helical and kinase domain mutations of PI3K alpha.
Proc.Natl.Acad.Sci.USA, 119, 2022
9J4L
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Crystal structure of GH9l Inulin fructotransferases (IFTase)
分子名称: DFA-III-forming inulin fructotransferase
著者Chen, G, Wang, Z.X, Yang, Y.Q, Li, Y.G, Zhang, T, Ouyang, S.Y, Zhang, L, Chen, Y, Ruan, X.L, Miao, M.
登録日2024-08-09
公開日2024-09-04
最終更新日2024-09-18
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Elucidation of the mechanism underlying the sequential catalysis of inulin by fructotransferase.
Int.J.Biol.Macromol., 277, 2024
9J4I
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Crystal structure of GH9l Inulin fructotransferases (IFTase) in compex with fruetosyl nystose (GF4)
分子名称: DFA-III-forming inulin fructotransferase, beta-D-fructofuranose-(2-1)-beta-D-fructofuranose-(2-1)-[alpha-D-glucopyranose-(1-2)]beta-D-fructofuranose, beta-D-fructofuranose-(2-1)-beta-D-fructofuranose-(2-1)-beta-D-fructofuranose-(2-1)-[alpha-D-glucopyranose-(1-2)]beta-D-fructofuranose
著者Chen, G, Wang, Z.X, Yang, Y.Q, Li, Y.G, Zhang, T, Ouyang, S.Y, Zhang, L, Chen, Y, Ruan, X.L, Miao, M.
登録日2024-08-09
公開日2024-09-04
最終更新日2024-09-18
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Elucidation of the mechanism underlying the sequential catalysis of inulin by fructotransferase.
Int.J.Biol.Macromol., 277, 2024
9J4J
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Crystal structure of GH9l Inulin fructotransferases(IFTase)incomplex with nystose(F3)
分子名称: DFA-III-forming inulin fructotransferase, beta-D-fructofuranose, beta-D-fructofuranose-(1-1)-beta-D-fructofuranose, ...
著者Chen, G, Wang, Z.X, Yang, Y.Q, Li, Y.G, Zhang, T, Ouyang, S.Y, Zhang, L, Chen, Y, Ruan, X.L, Miao, M.
登録日2024-08-09
公開日2024-09-04
最終更新日2024-09-18
実験手法X-RAY DIFFRACTION (2.803 Å)
主引用文献Elucidation of the mechanism underlying the sequential catalysis of inulin by fructotransferase.
Int.J.Biol.Macromol., 277, 2024
9J4K
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Crystal structure of GH9l Inulinfructotransferases (IFTase) in complex with GF2
分子名称: DFA-III-forming inulin fructotransferase, beta-D-fructofuranose-(2-1)-beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Chen, G, Wang, Z.X, Yang, Y.Q, Li, Y.G, Zhang, T, Ouyang, S.Y, Zhang, L, Chen, Y, Ruan, X.L, Miao, M.
登録日2024-08-09
公開日2024-09-04
最終更新日2024-09-18
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Elucidation of the mechanism underlying the sequential catalysis of inulin by fructotransferase.
Int.J.Biol.Macromol., 277, 2024
7MOQ
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The structure of the Tetrahymena thermophila outer dynein arm on doublet microtubule
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Docking complex 1 protein, ...
著者Kubo, S, Yang, S.K, Ichikawa, M, Bui, K.H.
登録日2021-05-03
公開日2021-07-14
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Remodeling and activation mechanisms of outer arm dyneins revealed by cryo-EM.
Embo Rep., 22, 2021
4ZM6
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A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase
分子名称: ACETYL COENZYME *A, N-acetyl-beta-D glucosaminidase, SULFATE ION
著者Qin, Z, Xiao, Y, Yang, X, Jiang, Z, Yang, S, Mesters, J.R.
登録日2015-05-02
公開日2015-12-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain glycoside hydrolase family 3 beta-N-acetylglucosaminidase
Sci Rep, 5, 2015
4LYP
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Crystal Structure of Glycoside Hydrolase Family 5 Mannosidase from Rhizomucor miehei
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Exo-beta-1,4-mannosidase, GUANIDINE
著者Jiang, Z.Q, Zhou, P, Yang, S.Q, Liu, Y, Yan, Q.J.
登録日2013-07-31
公開日2014-08-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Structural insights into the substrate specificity and transglycosylation activity of a fungal glycoside hydrolase family 5 beta-mannosidase.
Acta Crystallogr.,Sect.D, 70, 2014
4WY5
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Structural analysis of two fungal esterases from Rhizomucor miehei explaining their substrate specificity
分子名称: Esterase, SULFATE ION
著者Qin, Z, Yang, S, Duan, X, Yan, Q, Jiang, Z.
登録日2014-11-15
公開日2015-07-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structural insights into the substrate specificity of two esterases from the thermophilic Rhizomucor miehei
J.Lipid Res., 56, 2015
4WY8
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Structural analysis of two fungal esterases from Rhizomucor miehei explaining their substrate specificity
分子名称: esterase
著者Qin, Z, Yang, S, Duan, X, Yan, Q, Jiang, Z.
登録日2014-11-16
公開日2015-07-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structural insights into the substrate specificity of two esterases from the thermophilic Rhizomucor miehei
J.Lipid Res., 56, 2015
7MCR
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Human Apex/Ref1 homodimer formed under oxidative condition
分子名称: DNA-(apurinic or apyrimidinic site) endonuclease, mitochondrial, MAGNESIUM ION
著者Nam, Y.W, Yang, S.
登録日2021-04-02
公開日2022-04-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Development of Novel Apurinic/Aprymidinic Endonuclease/Redox-factor 1 Inhibitors for the Treatment of Human Melanoma
To Be Published
7MEV
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Human Apex/Ref1 monomer with C138A mutation
分子名称: DNA-(apurinic or apyrimidinic site) endonuclease, mitochondrial, GLYCEROL, ...
著者Nam, Y.W, Yang, S.
登録日2021-04-07
公開日2022-04-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Development of Novel Apurinic/Aprymidinic Endonuclease/Redox-factor 1 Inhibitors for the Treatment of Human Melanoma
To Be Published
4WTR
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Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaribiose
分子名称: beta-1,3-glucanosyltransferase, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose
著者Qin, Z, Yan, Q, Lei, J, Yang, S, Jiang, Z.
登録日2014-10-30
公開日2015-08-12
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献The first crystal structure of a glycoside hydrolase family 17 beta-1,3-glucanosyltransferase displays a unique catalytic cleft.
Acta Crystallogr.,Sect.D, 71, 2015
6UZT
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Crystal Structure of RPTP alpha
分子名称: Receptor-type tyrosine-protein phosphatase alpha
著者Santelli, E, Wen, Y, Yang, S, Svensson, M.N.D, Stanford, S.M, Bottini, N.
登録日2019-11-15
公開日2020-03-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献RPTP alpha phosphatase activity is allosterically regulated by the membrane-distal catalytic domain.
J.Biol.Chem., 295, 2020
4WTP
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Crystal structure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei
分子名称: 1,2-ETHANEDIOL, beta-1,3-glucanosyltransferase
著者Qin, Z, Yan, Q, Lei, J, Yang, S, Jiang, Z.
登録日2014-10-30
公開日2015-08-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The first crystal structure of a glycoside hydrolase family 17 beta-1,3-glucanosyltransferase displays a unique catalytic cleft.
Acta Crystallogr.,Sect.D, 71, 2015
4WTS
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Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaritriose
分子名称: beta-1,3-glucanosyltransferase, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose
著者Qin, Z, Yan, Q, Lei, J, Yang, S, Jiang, Z.
登録日2014-10-30
公開日2015-08-12
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The first crystal structure of a glycoside hydrolase family 17 beta-1,3-glucanosyltransferase displays a unique catalytic cleft.
Acta Crystallogr.,Sect.D, 71, 2015
1IHF
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INTEGRATION HOST FACTOR/DNA COMPLEX
分子名称: CADMIUM ION, DNA (35-MER), DNA (5'-D(*GP*CP*TP*TP*AP*TP*CP*AP*AP*TP*TP*TP*GP*TP*TP*GP*C P*AP*CP*C)-3'), ...
著者Rice, P.A, Yang, S.-W, Mizuuchi, K, Nash, H.A.
登録日1996-08-21
公開日1997-02-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn.
Cell(Cambridge,Mass.), 87, 1996
8QFU
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Diels-Alderase AbyU mutant - Y76F
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, YD repeat-containing protein
著者Tiwari, K, Burton, N.M, Yang, S, Race, P.R.
登録日2023-09-05
公開日2024-09-18
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structure of Diels-Alderase AbyU mutant Y76F at 1.56 Angstroms resolution.
To Be Published
5H9Y
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Crystal structure of GH family 64 laminaripentaose-producing beta-1,3-glucanase from Paenibacillus barengoltzii complexed with laminarihexaose.
分子名称: L(+)-TARTARIC ACID, beta-1,3-glucanase, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose, ...
著者Zhen, Q, Yan, Q, Yang, S, Jiang, Z, You, X.
登録日2015-12-29
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.969 Å)
主引用文献The recognition mechanism of triple-helical beta-1,3-glucan by a beta-1,3-glucanase
Chem. Commun. (Camb.), 53, 2017

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