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PDB: 85 件
7AYE
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BU of 7aye by Molmil
Crystal structure of the computationally designed chemically disruptable heterodimer LD6-MDM2
分子名称: Isoform 11 of E3 ubiquitin-protein ligase Mdm2, Thiol:disulfide interchange protein DsbD
著者Yang, C, Lau, K, Pojer, F, Correia, B.E.
登録日2020-11-12
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献A rational blueprint for the design of chemically-controlled protein switches.
Nat Commun, 12, 2021
1TFZ
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BU of 1tfz by Molmil
Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases
分子名称: (1-TERT-BUTYL-5-HYDROXY-1H-PYRAZOL-4-YL)[6-(METHYLSULFONYL)-4'-METHOXY-2-METHYL-1,1'-BIPHENYL-3-YL]METHANONE, 4-hydroxyphenylpyruvate dioxygenase, FE (III) ION
著者Yang, C, Pflugrath, J.W, Camper, D.L, Foster, M.L, Pernich, D.J, Walsh, T.A.
登録日2004-05-27
公開日2004-08-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and Mammalian 4-hydroxyphenylpyruvate dioxygenases
Biochemistry, 43, 2004
6YWC
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BU of 6ywc by Molmil
De novo designed protein 4E1H_95 in complex with 101F antibody
分子名称: Antibody 101F, Heavy Chain, light chain, ...
著者Yang, C, Sesterhenn, F, Pojer, F, Correia, B.E.
登録日2020-04-29
公開日2020-10-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Bottom-up de novo design of functional proteins with complex structural features.
Nat.Chem.Biol., 17, 2021
6YWD
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BU of 6ywd by Molmil
De novo designed protein 4H_01 in complex with Mota antibody
分子名称: Antibody Mota, Heavy Chain, Light Chain, ...
著者Yang, C, Sesterhenn, F, Pojer, F, Correia, B.E.
登録日2020-04-29
公開日2020-10-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Bottom-up de novo design of functional proteins with complex structural features.
Nat.Chem.Biol., 17, 2021
6XXV
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BU of 6xxv by Molmil
Crystal Structure of a computationally designed Immunogen S2_1.2 in complex with its elicited antibody C57
分子名称: Antibody C57, Heavy Chain, Light Chain, ...
著者Yang, C, Sesterhenn, F, Correia, B.E, Pojer, F.
登録日2020-01-28
公開日2020-04-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.20116425 Å)
主引用文献De novo protein design enables the precise induction of RSV-neutralizing antibodies.
Science, 368, 2020
3ULL
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BU of 3ull by Molmil
HUMAN MITOCHONDRIAL SINGLE-STRANDED DNA BINDING PROTEIN
分子名称: DNA BINDING PROTEIN
著者Yang, C, Curth, U, Urbanke, C, Kang, C.
登録日1996-12-11
公開日1997-10-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4 A resolution.
Nat.Struct.Biol., 4, 1997
5Z4Y
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BU of 5z4y by Molmil
Crystal structure of PaCysB NTD domain with space group P4
分子名称: Cys regulon transcriptional activator, GLYCEROL
著者Yang, C, Liang, H, Gan, J.
登録日2018-01-18
公開日2019-01-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Molecular insights into the master regulator CysB-mediated bacterial virulence in Pseudomonas aeruginosa.
Mol.Microbiol., 111, 2019
5Z4Z
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BU of 5z4z by Molmil
Crystal structure of PaCysB NTD domain with space group C2
分子名称: SULFATE ION, Transcriptional regulator CysB
著者Yang, C, Liang, H, Gan, J.
登録日2018-01-15
公開日2019-01-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.053 Å)
主引用文献Molecular insights into the master regulator CysB-mediated bacterial virulence in Pseudomonas aeruginosa.
Mol.Microbiol., 111, 2019
5Z50
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BU of 5z50 by Molmil
Crystal structure of PaCysB regulatory domain
分子名称: Cys regulon transcriptional activator, GLYCEROL, SULFATE ION
著者Yang, C, Liang, H, Gan, J.
登録日2018-01-15
公開日2019-01-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.206 Å)
主引用文献Molecular insights into the master regulator CysB-mediated bacterial virulence in Pseudomonas aeruginosa.
Mol.Microbiol., 111, 2019
4JP0
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BU of 4jp0 by Molmil
Crystal structure of Cry35Ab1
分子名称: 43.8 kDa insecticidal crystal protein
著者Yang, C, Pflugrath, J.W, Kelker, M.S, Evan, S.L, Narva, K.E.
登録日2013-03-19
公開日2014-04-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and biophysical characterization of Cry34Ab1 and Cry35Ab1
To be Published
4JOX
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BU of 4jox by Molmil
Crystal structure of cry34Ab1 protein at 2.15 A resolution
分子名称: 13.6 kDa insecticidal crystal protein
著者Yang, C, Pflugrath, J.W, Kelker, M.S, Evan, S.L, Narva, K.E.
登録日2013-03-19
公開日2014-04-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural and biophysical characterization of Cry34Ab1 and Cry35Ab1.
To be Published
1TG5
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BU of 1tg5 by Molmil
Crystal structures of plant 4-hydroxyphenylpyruvate dioxygenases complexed with DAS645
分子名称: 4-hydroxyphenylpyruvate dioxygenase, FE (II) ION, [1-TERT-BUTYL-3-(2,4-DICHLOROPHENYL)-5-HYDROXY-1H-PYRAZOL-4-YL][2-CHLORO-4-(METHYLSULFONYL)PHENYL]METHANONE
著者Yang, C, Pflugrath, J.W, Camper, D.L, Foster, M.L, Pernich, D.J, Walsh, T.A.
登録日2004-05-28
公開日2004-08-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and Mammalian 4-hydroxyphenylpyruvate dioxygenases
Biochemistry, 43, 2004
3J17
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BU of 3j17 by Molmil
Structure of a transcribing cypovirus by cryo-electron microscopy
分子名称: Structural protein VP3, Structural protein VP5, VP1
著者Yang, C, Ji, G, Liu, H, Zhang, K, Liu, G, Sun, F, Zhu, P, Cheng, L.
登録日2011-12-25
公開日2012-04-04
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Cryo-EM structure of a transcribing cypovirus.
Proc.Natl.Acad.Sci.USA, 109, 2012
5WYO
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BU of 5wyo by Molmil
Solution structure of E.coli HdeA
分子名称: Acid stress chaperone HdeA
著者Yang, C, Hu, Y, Jin, C.
登録日2017-01-14
公開日2017-11-22
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Characterizations of the Interactions between Escherichia coli Periplasmic Chaperone HdeA and Its Native Substrates during Acid Stress
Biochemistry, 56, 2017
1SQD
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BU of 1sqd by Molmil
Structural basis for inhibitor selectivity revealed by crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases
分子名称: 4-hydroxyphenylpyruvate dioxygenase, FE (III) ION
著者Yang, C, Pflugrath, J.W, Camper, D.L, Foster, M.L, Pernich, D.J, Walsh, T.A.
登録日2004-03-18
公開日2004-08-17
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and Mammalian 4-hydroxyphenylpyruvate dioxygenases
Biochemistry, 43, 2004
1SQI
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BU of 1sqi by Molmil
Structural basis for inhibitor selectivity revealed by crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases
分子名称: (1-TERT-BUTYL-5-HYDROXY-1H-PYRAZOL-4-YL)[6-(METHYLSULFONYL)-4'-METHOXY-2-METHYL-1,1'-BIPHENYL-3-YL]METHANONE, 4-hydroxyphenylpyruvic acid dioxygenase, FE (III) ION
著者Yang, C, Pflugrath, J.W, Camper, D.L, Foster, M.L, Pernich, D.J, Walsh, T.A.
登録日2004-03-18
公開日2004-08-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and Mammalian 4-hydroxyphenylpyruvate dioxygenases
Biochemistry, 43, 2004
7ML0
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BU of 7ml0 by Molmil
RNA polymerase II pre-initiation complex (PIC1)
分子名称: BJ4_G0050160.mRNA.1.CDS.1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ...
著者Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K.
登録日2021-04-27
公開日2022-02-02
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7ML1
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BU of 7ml1 by Molmil
RNA polymerase II pre-initiation complex (PIC2)
分子名称: BJ4_G0050160.mRNA.1.CDS.1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ...
著者Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K.
登録日2021-04-27
公開日2022-02-02
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7ML3
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BU of 7ml3 by Molmil
General transcription factor TFIIH (weak binding)
分子名称: BJ4_G0050160.mRNA.1.CDS.1, General transcription and DNA repair factor IIH, General transcription and DNA repair factor IIH helicase subunit XPB, ...
著者Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K.
登録日2021-04-27
公開日2022-02-02
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7ML4
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BU of 7ml4 by Molmil
RNA polymerase II initially transcribing complex (ITC)
分子名称: BJ4_G0050160.mRNA.1.CDS.1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ...
著者Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K.
登録日2021-04-27
公開日2022-02-02
最終更新日2022-03-09
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7ML2
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BU of 7ml2 by Molmil
RNA polymerase II pre-initiation complex (PIC3)
分子名称: BJ4_G0004860.mRNA.1.CDS.1, BJ4_G0050160.mRNA.1.CDS.1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K.
登録日2021-04-27
公開日2022-02-02
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7MEI
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BU of 7mei by Molmil
Composite structure of EC+EC
分子名称: DNA (74-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ...
著者Yang, C, Murakami, K.
登録日2021-04-06
公開日2022-03-02
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7MKA
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BU of 7mka by Molmil
Structure of EC+EC (leading EC-focused)
分子名称: DNA (40-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ...
著者Yang, C, Murakami, K.
登録日2021-04-22
公開日2022-04-27
最終更新日2023-05-17
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
7MK9
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BU of 7mk9 by Molmil
Complex structure of trailing EC of EC+EC (trailing EC-focused)
分子名称: DNA (40-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ...
著者Yang, C, Murakami, K.
登録日2021-04-22
公開日2022-04-27
最終更新日2023-05-17
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
5ZF2
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BU of 5zf2 by Molmil
Crystal structure of Trxlp from Edwardsiella tarda EIB202
分子名称: SULFATE ION, Thioredoxin (H-type,TRX-H)
著者Yang, C, Quan, S.
登録日2018-03-02
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献The Edwardsiella piscicida thioredoxin-like protein inhibits ASK1-MAPKs signaling cascades to promote pathogenesis during infection.
Plos Pathog., 15, 2019

 

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