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PDB: 376 results

1RKT
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BU of 1rkt by Molmil
Crystal structure of yfiR, a putative transcriptional regulator from Bacillus subtilis
Descriptor: UNKNOWN ATOM OR ION, protein yfiR
Authors:Anderson, W.F, Rajan, S.S, Yang, X, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-11-23
Release date:2004-04-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of YfiR, an unusual TetR/CamR-type putative transcriptional regulator from Bacillus subtilis.
Proteins, 65, 2006
6PZT
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BU of 6pzt by Molmil
cryo-EM structure of human NKCC1
Descriptor: Solute carrier family 12 member 2
Authors:Cao, E, Wang, Q, Yang, X.
Deposit date:2019-08-01
Release date:2020-03-25
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structure of the human cation-chloride cotransporter NKCC1 determined by single-particle electron cryo-microscopy.
Nat Commun, 11, 2020
3TUO
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BU of 3tuo by Molmil
Crystal structure of N-terminal domain of DNA-binding protein satb1
Descriptor: DNA-binding protein SATB1
Authors:Wang, Z, Yang, X, Long, J, Shen, Y.
Deposit date:2011-09-17
Release date:2012-02-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:The structural basis for the oligomerization of the N-terminal domain of SATB1
Nucleic Acids Res., 40, 2012
1TO9
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BU of 1to9 by Molmil
Crystal structure of THI-4 protein from Bacillus subtilis
Descriptor: 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE, THI-4 protein
Authors:Rajan, S.S, Shuvalova, L, Yang, X, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-06-14
Release date:2004-08-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of THI-4 protein from Bacillus subtilis
To be Published
3UIT
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BU of 3uit by Molmil
Overall structure of Patj/Pals1/Mals complex
Descriptor: ACETATE ION, InaD-like protein, MAGUK p55 subfamily member 5, ...
Authors:Zhang, J, Yang, X, Long, J, Shen, Y.
Deposit date:2011-11-06
Release date:2012-02-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of an L27 domain heterotrimer from cell polarity complex Patj/Pals1/Mals2 reveals mutually independent L27 domain assembly mode
J.Biol.Chem., 287, 2012
1U8X
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BU of 1u8x by Molmil
CRYSTAL STRUCTURE OF GLVA FROM BACILLUS SUBTILIS, A METAL-REQUIRING, NAD-DEPENDENT 6-PHOSPHO-ALPHA-GLUCOSIDASE
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, MANGANESE (II) ION, Maltose-6'-phosphate glucosidase, ...
Authors:Rajan, S.S, Yang, X, Collart, F, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-08-09
Release date:2004-08-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Novel Catalytic Mechanism of Glycoside Hydrolysis Based on the Structure of an NAD(+)/Mn(2+)-Dependent Phospho-alpha-Glucosidase from Bacillus subtilis.
STRUCTURE, 12, 2004
3BV6
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BU of 3bv6 by Molmil
Crystal structure of uncharacterized metallo protein from Vibrio cholerae with beta-lactamase like fold
Descriptor: FE (III) ION, Metal-dependent hydrolase
Authors:Minasov, G, Shuvalova, L, Brunzelle, J.S, Yang, X, Collart, F.R, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-01-04
Release date:2008-01-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of uncharacterized metallo protein from Vibrio cholerae with beta-lactamase like fold.
To be Published
7XGL
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BU of 7xgl by Molmil
Quinolinate Phosphoribosyl Transferase (QAPRTase) from Streptomyces pyridomyceticus NRRL B-2517 in Apo form
Descriptor: CHLORIDE ION, GLYCEROL, Quinolinate Phosphoribosyl Transferase, ...
Authors:Zhou, Z, Yang, X, Huang, T, Wang, X, Liang, R, Zheng, J, Dai, S, Lin, S, Deng, Z.
Deposit date:2022-04-05
Release date:2023-03-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Bifunctional NadC Homologue PyrZ Catalyzes Nicotinic Acid Formation in Pyridomycin Biosynthesis.
Acs Chem.Biol., 18, 2023
7XGM
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BU of 7xgm by Molmil
Quinolinate Phosphoribosyl Transferase (QAPRTase) from Streptomyces pyridomyceticus NRRL B-2517 in complex with Quinolinic Acid (QA)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, QUINOLINIC ACID, ...
Authors:Zhou, Z, Yang, X, Huang, T, Wang, X, Liang, R, Zheng, J, Dai, S, Lin, S, Deng, Z.
Deposit date:2022-04-05
Release date:2023-03-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Bifunctional NadC Homologue PyrZ Catalyzes Nicotinic Acid Formation in Pyridomycin Biosynthesis.
Acs Chem.Biol., 18, 2023
7XGN
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BU of 7xgn by Molmil
Quinolinate Phosphoribosyl Transferase (QAPRTase) from Streptomyces pyridomyceticus NRRL B-2517 in complex with Nicotinic Acid (NA)
Descriptor: CHLORIDE ION, NICOTINIC ACID, Quinolinate Phosphoribosyl Transferase, ...
Authors:Zhou, Z, Yang, X, Huang, T, Wang, X, Liang, R, Zheng, J, Dai, S, Lin, S, Deng, Z.
Deposit date:2022-04-05
Release date:2023-03-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Bifunctional NadC Homologue PyrZ Catalyzes Nicotinic Acid Formation in Pyridomycin Biosynthesis.
Acs Chem.Biol., 18, 2023
1NBS
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BU of 1nbs by Molmil
Crystal structure of the specificity domain of Ribonuclease P RNA
Descriptor: LEAD (II) ION, MAGNESIUM ION, RIBONUCLEASE P RNA
Authors:Krasilnikov, A.S, Yang, X, Pan, T, Mondragon, A.
Deposit date:2002-12-03
Release date:2003-02-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal structure of the specificity domain of Ribonuclease P
Nature, 421, 2003
3FGQ
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BU of 3fgq by Molmil
Crystal structure of native human neuroserpin
Descriptor: GLYCEROL, Neuroserpin
Authors:Takehara, S, Yang, X, Mikami, B, Onda, M.
Deposit date:2008-12-08
Release date:2009-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:The 2.1-A crystal structure of native neuroserpin reveals unique structural elements that contribute to conformational instability
J.Mol.Biol., 388, 2009
8YLN
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BU of 8yln by Molmil
The structure of DSR2-Tail tube complex
Descriptor: Bacillus phage SPR Tube protein, SIR2-like domain-containing protein
Authors:Zheng, J, Yang, X.
Deposit date:2024-03-06
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Structural insights into autoinhibition and activation of defense-associated sirtuin protein.
Int.J.Biol.Macromol., 277, 2024
8ZTR
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BU of 8ztr by Molmil
The dimer complex of DSR2 and tube-forming domain of phage tail tube protein
Descriptor: Bacillus phage SPR Tube protein, SIR2-like domain-containing protein
Authors:Zheng, J, Yang, X.
Deposit date:2024-06-07
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structural insights into autoinhibition and activation of defense-associated sirtuin protein.
Int.J.Biol.Macromol., 277, 2024
8Z18
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BU of 8z18 by Molmil
The tetramer complex of DSR2 and tube-forming domain of phage tail tube protein
Descriptor: Bacillus phage SPR Tube protein, SIR2-like domain-containing protein
Authors:Zheng, J, Yang, X.
Deposit date:2024-04-10
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.94 Å)
Cite:Structural insights into autoinhibition and activation of defense-associated sirtuin protein.
Int.J.Biol.Macromol., 277, 2024
8YLT
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BU of 8ylt by Molmil
The structure of DSR2 and NAD+ complex
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SIR2-like domain-containing protein
Authors:Zheng, J, Yang, X.
Deposit date:2024-03-06
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural insights into autoinhibition and activation of defense-associated sirtuin protein.
Int.J.Biol.Macromol., 277, 2024
8YKF
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BU of 8ykf by Molmil
The DSR2-DSAD1 complex with DSAD1 on the opposite sides
Descriptor: DSAD1, SIR2-like domain-containing protein
Authors:Zheng, J, Yang, X.
Deposit date:2024-03-05
Release date:2024-08-14
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural insights into autoinhibition and activation of defense-associated sirtuin protein.
Int.J.Biol.Macromol., 277, 2024
6D1W
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BU of 6d1w by Molmil
human PKD2 F604P mutant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Polycystin-2
Authors:Zheng, W, Yang, X, Bulkley, D, Chen, X.Z, Cao, E.
Deposit date:2018-04-12
Release date:2018-06-27
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Hydrophobic pore gates regulate ion permeation in polycystic kidney disease 2 and 2L1 channels.
Nat Commun, 9, 2018
4R3Q
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BU of 4r3q by Molmil
Crystal structure of SYCE3
Descriptor: Synaptonemal complex central element protein 3
Authors:Lu, J, Feng, J, Zhou, W, Yang, X, Shen, Y.
Deposit date:2014-08-17
Release date:2014-11-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Structural insight into the central element assembly of the synaptonemal complex
Sci Rep, 4, 2014
2QME
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BU of 2qme by Molmil
Crystal structure of human RAC3 in complex with CRIB domain of human p21-activated kinase 1 (PAK1)
Descriptor: CRIB domain of the Serine/threonine-protein kinase PAK 1, GLYCEROL, MAGNESIUM ION, ...
Authors:Ugochukwu, E, Yang, X, Elkins, J.M, Burgess-Brown, N, Bunkoczi, G, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A, von Delft, F, Knapp, S, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2007-07-16
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of the human RAC3 in complex with the CRIB domain of human p21-activated kinase 1 (PAK1).
To be Published
2QG1
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BU of 2qg1 by Molmil
Crystal structure of the 11th PDZ domain of MPDZ (MUPP1)
Descriptor: 1,2-ETHANEDIOL, Multiple PDZ domain protein
Authors:Papagrigoriou, E, Salah, E, Phillips, C, Savitsky, P, Boisguerin, P, Oschkinat, H, Gileadi, C, Yang, X, Elkins, J.M, Ugochukwu, E, Bunkoczi, G, Uppenberg, J, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A, von Delft, F, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2007-06-28
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the 11th PDZ domain of MPDZ (MUPP1).
To be Published
8IZS
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BU of 8izs by Molmil
Structure of a triple-helix region of human collagen type XVII
Descriptor: Collagen alpha-1(XVII) chain
Authors:Zhu, Y, Yang, X, Sun, F.
Deposit date:2023-04-07
Release date:2024-10-16
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structure of a triple-helix region of human collagen type XVII
To Be Published
8K6L
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BU of 8k6l by Molmil
Cryo-EM structure of human OATP1B1 in complex with DCF
Descriptor: 2',7'-bis(chloranyl)-3',6'-bis(oxidanyl)spiro[2-benzofuran-3,9'-xanthene]-1-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shan, Z, Yang, X, Zhang, Y.
Deposit date:2023-07-25
Release date:2023-09-13
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Cryo-EM structures of human organic anion transporting polypeptide OATP1B1.
Cell Res., 33, 2023
6VOC
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BU of 6voc by Molmil
icosahedral symmetry reconstruction of brome mosaic virus (RNA 3+4)
Descriptor: Capsid protein
Authors:Beren, C, Cui, Y.X, Chakravarty, A, Yang, X, Rao, A.L.N, Knobler, C.M, Zhou, Z.H, Gelbart, W.M.
Deposit date:2020-01-30
Release date:2020-05-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Genome organization and interaction with capsid protein in a multipartite RNA virus.
Proc.Natl.Acad.Sci.USA, 117, 2020
3Q5M
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BU of 3q5m by Molmil
Crystal structure of Escherichia coli BamD
Descriptor: IODIDE ION, UPF0169 lipoprotein yfiO
Authors:Dong, C, Hou, H, Yang, X, Dong, Y, Shen, Y.
Deposit date:2010-12-28
Release date:2011-12-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.604 Å)
Cite:Structure of Escherichia coli BamD and its functional implications in outer membrane protein assembly
Acta Crystallogr.,Sect.D, 68, 2012

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