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PDB: 501 件
2CVY
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BU of 2cvy by Molmil
Structures of Yeast Ribonucleotide Reductase I
分子名称: 9-per peptide from Ribonucleoside-diphosphate reductase small chain 1, MAGNESIUM ION, Ribonucleoside-diphosphate reductase large chain 1, ...
著者Xu, H, Faber, C, Uchiki, T, Fairman, J.W, Racca, J, Dealwis, C.
登録日2005-06-14
公開日2006-03-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of eukaryotic ribonucleotide reductase I provide insights into dNTP regulation
Proc.Natl.Acad.Sci.Usa, 103, 2006
2ZLF
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BU of 2zlf by Molmil
The Structural Basis for Peptidomimetic Inhibition of Eukaryotic Ribonucleotide Reductase
分子名称: FTLDADF, Ribonucleoside-diphosphate reductase large chain 1
著者Xu, H, Fairman, J.W, Wijerathna, S.R, LaMacchia, J, Kreischer, N.R, Helmbrecht, E, Cooperman, B.S, Dealwis, C.
登録日2008-04-09
公開日2008-08-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献The Structural Basis for Peptidomimetic Inhibition of Eukaryotic Ribonucleotide Reductase: A Conformationally Flexible Pharmacophore
J.Med.Chem., 51, 2008
2CVW
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Structures of Yeast Ribonucleotide Reductase I
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ribonucleoside-diphosphate reductase large chain 1, ...
著者Xu, H, Faber, C, Uchiki, T, Fairman, J.W, Racca, J, Dealwis, C.
登録日2005-06-14
公開日2006-03-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of eukaryotic ribonucleotide reductase I provide insights into dNTP regulation
Proc.Natl.Acad.Sci.Usa, 103, 2006
2CVU
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BU of 2cvu by Molmil
Structures of Yeast Ribonucleotide Reductase I
分子名称: CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Xu, H, Faber, C, Uchiki, T, Fairman, J.W, Racca, J, Dealwis, C.
登録日2005-06-14
公開日2006-03-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of eukaryotic ribonucleotide reductase I provide insights into dNTP regulation
Proc.Natl.Acad.Sci.Usa, 103, 2006
2ZLG
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BU of 2zlg by Molmil
The Structual Basis for Peptidomimetic Inhibition of Eukaryotic Ribonucleotide Reductase
分子名称: (5R,9S,12S,15S,18S,21S)-21-benzyl-12,18-bis(carboxymethyl)-15-cyclohexyl-1-(9H-fluoren-9-yl)-4-methyl-9-(2-methylpropyl)-3,6,10,13,16,19-hexaoxo-5-phenyl-2-oxa-4,8,11,14,17,20-hexaazadocosan-22-oic acid, GLYCEROL, Ribonucleoside-diphosphate reductase large chain 1
著者Xu, H, Fairman, J.W, Wijerathna, S.R, LaMacchia, J, Kreischer, N.R, Helmbrecht, E, Cooperman, B.S, Dealwis, C.
登録日2008-04-09
公開日2008-08-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献The Structural Basis for Peptidomimetic Inhibition of Eukaryotic Ribonucleotide Reductase: A Conformationally Flexible Pharmacophore
J.Med.Chem., 51, 2008
2CVS
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BU of 2cvs by Molmil
Structures of Yeast Ribonucleotide Reductase I
分子名称: Ribonucleoside-diphosphate reductase large chain 1
著者Xu, H, Faber, C, Uchiki, T, Fairman, J.W, Racca, J, Dealwis, C.
登録日2005-06-14
公開日2006-03-07
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of eukaryotic ribonucleotide reductase I provide insights into dNTP regulation
Proc.Natl.Acad.Sci.Usa, 103, 2006
8X8L
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BU of 8x8l by Molmil
Cryo-EM structure of the cortistatin 17-bound Somatostatin receptor 5-Gi protein complex
分子名称: Cortistatin, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Xu, H.E, You, C, Zhao, L, Li, J.
登録日2023-11-27
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Cryo-EM structure of the cortistatin 17-bound Somatostatin receptor 5-Gi protein complex
To Be Published
1NLF
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BU of 1nlf by Molmil
Crystal Structure of DNA Helicase RepA in complex with sulfate at 1.95 A resolution
分子名称: Regulatory protein repA, SULFATE ION
著者Xu, H, Strater, N, Schroeder, W, Bottcher, C, Ludwig, K, Saenger, W.
登録日2003-01-07
公開日2003-04-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of DNA helicase RepA in complex with sulfate at 1.95 A resolution implicates structural changes to an "open" form.
Acta Crystallogr.,Sect.D, 59, 2003
8X8N
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BU of 8x8n by Molmil
Cryo-EM structure of the octreotide-bound Somatostatin receptor 5-Gi protein complex
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha, ...
著者Xu, H.E, You, C, Zhao, L, Li, J.
登録日2023-11-27
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Cryo-EM structure of the octreotide-bound Somatostatin receptor 5-Gi protein complex
To Be Published
3GWX
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BU of 3gwx by Molmil
MOLECULAR RECOGNITION OF FATTY ACIDS BY PEROXISOME PROLIFERATOR-ACTIVATED RECEPTORS
分子名称: 5,8,11,14,17-EICOSAPENTAENOIC ACID, PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR (PPAR-DELTA))
著者Xu, H.E, Lambert, M.H, Montana, V.G, Parks, D.J, Blanchard, S.G, Brown, P.J, Sternbach, D.D, Lehmann, J.M, Wisely, G.B, Willson, T.M, Kliewer, S.A, Milburn, M.V.
登録日1999-04-26
公開日2000-04-26
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular recognition of fatty acids by peroxisome proliferator-activated receptors.
Mol.Cell, 3, 1999
1XHO
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BU of 1xho by Molmil
Chorismate mutase from Clostridium thermocellum Cth-682
分子名称: Chorismate mutase, UNKNOWN ATOM OR ION
著者Xu, H, Chen, L, Lee, D, Habel, J.E, Nguyen, J, Chang, S.-H, Kataeva, I, Chang, J, Zhao, M, Yang, H, Horanyi, P, Florence, Q, Tempel, W, Zhou, W, Lin, D, Zhang, H, Praissman, J, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Ljungdahl, L, Liu, Z.-J, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-09-20
公開日2004-11-23
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Away from the edge II: in-house Se-SAS phasing with chromium radiation.
Acta Crystallogr.,Sect.D, 61, 2005
3F5O
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BU of 3f5o by Molmil
Crystal Structure of hTHEM2(undecan-2-one-CoA) complex
分子名称: CHLORIDE ION, COENZYME A, HEXAETHYLENE GLYCOL, ...
著者Xu, H, Gong, W.
登録日2008-11-04
公開日2009-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The mechanisms of human hotdog-fold thioesterase 2 (hTHEM2) substrate recognition and catalysis illuminated by a structure and function based analysis
Biochemistry, 48, 2009
3J6C
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BU of 3j6c by Molmil
Cryo-EM structure of MAVS CARD filament
分子名称: Mitochondrial antiviral-signaling protein
著者Xu, H, He, X, Zheng, H, Huang, L.J, Hou, F, Yu, Z, de la Cruz, M.J, Borkowski, B, Zhang, X, Chen, Z.J, Jiang, Q.-X.
登録日2014-02-04
公開日2014-03-05
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9.6 Å)
主引用文献Structural basis for the prion-like MAVS filaments in antiviral innate immunity.
Elife, 3, 2014
2GWX
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BU of 2gwx by Molmil
MOLECULAR RECOGNITION OF FATTY ACIDS BY PEROXISOME PROLIFERATOR-ACTIVATED RECEPTORS
分子名称: PROTEIN (PPAR-DELTA)
著者Xu, H.E, Lambert, M.H, Montana, V.G, Park, D.J, Blanchard, S, Brown, P, Sternbach, D, Lehmann, J, Bruce, G.W, Willson, T.M, Kliewer, S.A, Milburn, M.V.
登録日1999-03-11
公開日2000-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular recognition of fatty acids by peroxisome proliferator-activated receptors.
Mol.Cell, 3, 1999
8HP4
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BU of 8hp4 by Molmil
CtPDC complex
分子名称: MAGNESIUM ION, Pyruvate decarboxylase, THIAMINE DIPHOSPHATE
著者Xu, H.H, Song, W.
登録日2022-12-11
公開日2024-01-17
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Protein engineering of pyruvate decarboxylase to remove the rate-limiting bottleneck in the cascade pathway of tyrosol synthesis
To Be Published
8HP2
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BU of 8hp2 by Molmil
CtPDC
分子名称: Pyruvate decarboxylase
著者Xu, H.H, Song, W.
登録日2022-12-11
公開日2024-01-17
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Protein engineering of pyruvate decarboxylase to remove the rate-limiting bottleneck in the cascade pathway of tyrosol synthesis
To Be Published
1ZGG
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BU of 1zgg by Molmil
Solution structure of a low molecular weight protein tyrosine phosphatase from Bacillus subtilis
分子名称: Putative low molecular weight protein-tyrosine-phosphatase ywlE
著者Xu, H, Xia, B, Jin, C.
登録日2005-04-21
公開日2006-03-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of a low-molecular-weight protein tyrosine phosphatase from Bacillus subtilis
J.Bacteriol., 188, 2006
1ZYZ
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BU of 1zyz by Molmil
Structures of Yeast Ribonucloetide Reductase I
分子名称: GLYCINE, Ribonucleoside-diphosphate reductase large chain 1
著者Xu, H, Faber, C, Uchiki, T, Fairman, J.W, Racca, J, Dealwis, C.
登録日2005-06-13
公開日2006-03-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of eukaryotic ribonucleotide reductase I provide insights into dNTP regulation
Proc.Natl.Acad.Sci.Usa, 103, 2006
1ZZD
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BU of 1zzd by Molmil
Structures of Yeast Ribonucleotide Reductase I
分子名称: Ribonucleoside-diphosphate reductase large chain 1, Ribonucleoside-diphosphate reductase small chain 2
著者Xu, H, Faber, C, Uchiki, T, Fairman, J.W, Racca, J, Dealwis, C.
登録日2005-06-13
公開日2006-03-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of eukaryotic ribonucleotide reductase I provide insights into dNTP regulation
Proc.Natl.Acad.Sci.Usa, 103, 2006
6LG4
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BU of 6lg4 by Molmil
crystal structure of the first bromodomain of human BRD4 in complex with compound BDF-1024
分子名称: 7-chloranyl-5-nitro-quinolin-8-ol, Bromodomain-containing protein 4
著者Xu, H, Zuo, Y, Zhang, H.
登録日2019-12-04
公開日2020-12-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Lead-Opt: An efficient tool for structural optimization of lead compounds
To Be Published
6LG8
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BU of 6lg8 by Molmil
crystal structure of the first bromodomain of human BRD4 in complex with compound BDF-2138
分子名称: 2-azanyl-5-fluoranyl-4-imidazol-1-yl-quinolin-8-ol, Bromodomain-containing protein 4
著者Xu, H, Zuo, Y, Zhang, H.
登録日2019-12-04
公開日2020-12-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Lead-Opt: An efficient tool for structural optimization of lead compounds
To Be Published
2GZY
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BU of 2gzy by Molmil
solution structures of the reduced form of thioredoxin from Bacillus subtilis
分子名称: Thioredoxin
著者Xu, H, Zhang, X, Chen, J, Jin, C.
登録日2006-05-12
公開日2007-02-13
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Conformational fluctuations coupled to the thiol-disulfide transfer between thioredoxin and arsenate reductase in Bacillus subtilis.
J.Biol.Chem., 282, 2007
2GZZ
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BU of 2gzz by Molmil
solution structures of the oxidized form of thioredoxin from Bacillus subtilis
分子名称: thioredoxin
著者Xu, H, Zhang, X, Chen, J, Jin, C.
登録日2006-05-12
公開日2007-02-13
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Conformational fluctuations coupled to the thiol-disulfide transfer between thioredoxin and arsenate reductase in Bacillus subtilis.
J.Biol.Chem., 282, 2007
6LG9
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BU of 6lg9 by Molmil
crystal structure of the first bromodomain of human BRD4 in complex with compound BDF-2143
分子名称: 2-azanyl-7-bromanyl-4-imidazol-1-yl-quinolin-8-ol, Bromodomain-containing protein 4
著者Xu, H, Zuo, Y.
登録日2019-12-04
公開日2020-12-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Lead-Opt: An efficient tool for structural optimization of lead compounds
To Be Published
7DCN
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BU of 7dcn by Molmil
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
分子名称: Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferase, SULFATE ION, ZINC ION
著者Xu, H, Wang, B, Su, X.D.
登録日2020-10-26
公開日2021-11-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.695 Å)
主引用文献Co-evolution-based prediction of metal-binding sites in proteomes by machine learning.
Nat.Chem.Biol., 19, 2023

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件を2024-10-30に公開中

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