Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 190 件

3UTM
DownloadVisualize
BU of 3utm by Molmil
Crystal structure of a mouse Tankyrase-Axin complex
分子名称: Axin-1, Tankyrase-1
著者Cheng, Z, Morrone, S, Xu, W.
登録日2011-11-26
公開日2012-01-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a Tankyrase-Axin complex and its implications for Axin turnover and Tankyrase substrate recruitment.
Proc.Natl.Acad.Sci.USA, 109, 2012
8HIB
DownloadVisualize
BU of 8hib by Molmil
The crystal structure of Pygo2-LDB1-SSBP2 triple complex
分子名称: LIM domain-binding protein 1, Pygopus homolog 2, Single-stranded DNA-binding protein 2
著者Wang, H.Y, Yan, X.X, Xu, W.Q.
登録日2022-11-19
公開日2023-11-22
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献The crystal structure of Pygo2-LDB1-SSBP2 triple complex
To Be Published
6BMG
DownloadVisualize
BU of 6bmg by Molmil
Structure of Recombinant Dwarf Sperm Whale Myoglobin (Oxy)
分子名称: ACETATE ION, CADMIUM ION, Myoglobin, ...
著者Samuel, P.P, Miller, M.D, Xu, W, Alvarado, S, Phillips Jr, G.N, Olson, J.S.
登録日2017-11-14
公開日2017-11-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structure of Recombinant Dwarf Sperm Whale Myoglobin (Oxy)
To Be Published
6BUI
DownloadVisualize
BU of 6bui by Molmil
Crystal structure of a membrane protein, crystal form III
分子名称: Integral membrane protein
著者Ma, D, Wang, Z, Xu, W.
登録日2017-12-10
公開日2018-10-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.27 Å)
主引用文献Crystal structure of a membrane-bound O-acyltransferase.
Nature, 562, 2018
4FC2
DownloadVisualize
BU of 4fc2 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain
分子名称: Poly(ADP-ribose) glycohydrolase, SULFATE ION
著者Wang, Z, Cheng, Z, Xu, W.
登録日2012-05-23
公開日2012-06-06
最終更新日2018-10-17
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
PLoS ONE, 9, 2014
4OO2
DownloadVisualize
BU of 4oo2 by Molmil
Streptomyces globisporus C-1027 FAD dependent (S)-3-chloro-β-tyrosine-S-SgcC2 C-5 hydroxylase SgcC apo form
分子名称: CALCIUM ION, Chlorophenol-4-monooxygenase, GLYCEROL
著者Cao, H, Xu, W, Bingman, C.A, Lohman, J.R, Yennamalli, R, Shen, B, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2014-01-29
公開日2014-02-12
最終更新日2023-03-22
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Crystal Structures of SgcE6 and SgcC, the Two-Component Monooxygenase That Catalyzes Hydroxylation of a Carrier Protein-Tethered Substrate during the Biosynthesis of the Enediyne Antitumor Antibiotic C-1027 in Streptomyces globisporus.
Biochemistry, 55, 2016
4NA4
DownloadVisualize
BU of 4na4 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain with ADP-HPD
分子名称: 5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE, IODIDE ION, Poly(ADP-ribose) glycohydrolase
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2014-09-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4N9Y
DownloadVisualize
BU of 4n9y by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E748Q
分子名称: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), Poly(ADP-ribose) glycohydrolase, SULFATE ION
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4NA0
DownloadVisualize
BU of 4na0 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain with ADPRibose
分子名称: IODIDE ION, Poly(ADP-ribose) glycohydrolase, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2014-09-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
7UX6
DownloadVisualize
BU of 7ux6 by Molmil
Crystal structure of MfnG, an L- and D-tyrosine O-methyltransferase from the marformycin biosynthesis pathway of Streptomyces drozdowiczii, with SAH bound at 1.35 A resolution (P212121 - form I)
分子名称: MfnG, S-ADENOSYL-L-HOMOCYSTEINE, UNKNOWN LIGAND
著者Miller, M.D, Wu, K.-L, Xu, W, Xiao, H, Philips Jr, G.N.
登録日2022-05-05
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Expanding the eukaryotic genetic code with a biosynthesized 21st amino acid.
Protein Sci., 31, 2022
4N9Z
DownloadVisualize
BU of 4n9z by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E749Q
分子名称: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), Poly(ADP-ribose) glycohydrolase, SULFATE ION
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4NA5
DownloadVisualize
BU of 4na5 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E748N
分子名称: Poly(ADP-ribose) glycohydrolase, SULFATE ION
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
7VZF
DownloadVisualize
BU of 7vzf by Molmil
Cryo-EM structure of amyloid fibril formed by full-length human SOD1
分子名称: Superoxide dismutase [Cu-Zn]
著者Wang, L.Q, Ma, Y.Y, Yuan, H.Y, Zhao, K, Zhang, M.Y, Wang, Q, Huang, X, Xu, W.C, Chen, J, Li, D, Zhang, D.L, Zou, L.Y, Yin, P, Liu, C, Liang, Y.
登録日2021-11-16
公開日2022-06-29
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Cryo-EM structure of an amyloid fibril formed by full-length human SOD1 reveals its conformational conversion.
Nat Commun, 13, 2022
3Q7J
DownloadVisualize
BU of 3q7j by Molmil
Engineered Thermoplasma Acidophilum F3 factor mimics human aminopeptidase N (APN) as a target for anticancer drug development
分子名称: L-phenylalanyl-N6-[(benzyloxy)carbonyl]-N1-hydroxy-L-lysinamide, Tricorn protease-interacting factor F3, ZINC ION
著者Su, J, Wang, Q, Feng, J, Zhang, C, Zhu, D, We, T, Xu, W, Gu, L.
登録日2011-01-05
公開日2011-07-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Engineered Thermoplasma acidophilum factor F3 mimics human aminopeptidase N (APN) as a target for anticancer drug development
Bioorg.Med.Chem., 19, 2011
4NA6
DownloadVisualize
BU of 4na6 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E749N
分子名称: Poly(ADP-ribose) glycohydrolase, SULFATE ION
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4QPL
DownloadVisualize
BU of 4qpl by Molmil
Crystal structure of RNF146(RING-WWE)/UbcH5a/iso-ADPr complex
分子名称: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), E3 ubiquitin-protein ligase RNF146, Ubiquitin-conjugating enzyme E2 D1, ...
著者Wang, Z, DaRosa, P.A, Klevit, R.E, Xu, W.
登録日2014-06-23
公開日2014-10-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Allosteric activation of the RNF146 ubiquitin ligase by a poly(ADP-ribosyl)ation signal.
Nature, 517, 2015
6DRU
DownloadVisualize
BU of 6dru by Molmil
Xylosidase from Aspergillus niger
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Glycosyl hydrolases family 31 family protein, ...
著者Cao, H, Xu, W, Betancourt, M, Walton, J.D, Brumm, P, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2018-06-13
公開日2018-08-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of alpha-Xylosidase fromAspergillus nigerin Complex with a Hydrolyzed Xyloglucan Product and New Insights in Accurately Predicting Substrate Specificities of GH31 Family Glycosidases.
Acs Sustain Chem Eng, 8, 2020
6BUG
DownloadVisualize
BU of 6bug by Molmil
Crystal structure of a membrane protein, crystal form I
分子名称: D-alanyl carrier protein, D-alanyl transfer protein DltB
著者Ma, D, Wang, Z, Xu, W.
登録日2017-12-10
公開日2018-10-10
最終更新日2018-10-24
実験手法X-RAY DIFFRACTION (3.27 Å)
主引用文献Crystal structure of a membrane-bound O-acyltransferase.
Nature, 562, 2018
6BUH
DownloadVisualize
BU of 6buh by Molmil
Crystal structure of a membrane protein, crystal form II
分子名称: D-alanyl carrier protein, D-alanyl transfer protein DltB
著者Ma, D, Wang, Z, Xu, W.
登録日2017-12-10
公開日2018-10-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Crystal structure of a membrane-bound O-acyltransferase.
Nature, 562, 2018
4EFB
DownloadVisualize
BU of 4efb by Molmil
Crystal structure of DNA ligase
分子名称: 4-amino-2-(cyclopentyloxy)-6-{[(1R,2S)-2-hydroxycyclopentyl]oxy}pyrimidine-5-carboxamide, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DNA ligase, ...
著者Wei, Y, Wang, T, Charifson, P, Xu, W.
登録日2012-03-29
公開日2013-04-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of DNA ligase
To be Published
7UX8
DownloadVisualize
BU of 7ux8 by Molmil
Crystal structure of MfnG, an L- and D-tyrosine O-methyltransferase from the marformycin biosynthesis pathway of Streptomyces drozdowiczii, with SAH and L-Tyrosine bound at 1.4 A resolution (P212121 - form II)
分子名称: MfnG, S-ADENOSYL-L-HOMOCYSTEINE, TYROSINE, ...
著者Miller, M.D, Wu, K.-L, Xu, W, Xiao, H, Philips Jr, G.N.
登録日2022-05-05
公開日2022-09-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Expanding the eukaryotic genetic code with a biosynthesized 21st amino acid.
Protein Sci., 31, 2022
7UX7
DownloadVisualize
BU of 7ux7 by Molmil
Crystal structure of MfnG, an L- and D-tyrosine O-methyltransferase from the marformycin biosynthesis pathway of Streptomyces drozdowiczii, with SAH bound at 1.2 A resolution (P212121 - form II)
分子名称: MfnG, S-ADENOSYL-L-HOMOCYSTEINE, UNKNOWN LIGAND
著者Miller, M.D, Wu, K.-L, Xu, W, Xiao, H, Philips Jr, G.N.
登録日2022-05-05
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Expanding the eukaryotic genetic code with a biosynthesized 21st amino acid.
Protein Sci., 31, 2022
6KHX
DownloadVisualize
BU of 6khx by Molmil
Crystal structure of Prx from Akkermansia muciniphila
分子名称: CALCIUM ION, Peroxiredoxin
著者Li, M, Wang, J, Xu, W, Wang, Y, Zhang, M, Wang, M.
登録日2019-07-16
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Crystal structure of Akkermansia muciniphila peroxiredoxin reveals a novel regulatory mechanism of typical 2-Cys Prxs by a distinct loop.
Febs Lett., 594, 2020
4FLI
DownloadVisualize
BU of 4fli by Molmil
Human MetAP1 with bengamide analog Y16, in Mn form
分子名称: (E,2R,3R,4S,5R)-N-(2-azanyl-2-oxidanylidene-ethyl)-2-methoxy-8,8-dimethyl-3,4,5-tris(oxidanyl)non-6-enamide, MANGANESE (II) ION, Methionine aminopeptidase 1, ...
著者Ye, Q.Z, Xu, W.
登録日2012-06-14
公開日2012-09-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural analysis of bengamide derivatives as inhibitors of methionine aminopeptidases.
J.Med.Chem., 55, 2012
4FLJ
DownloadVisualize
BU of 4flj by Molmil
Human MetAP1 with bengamide analog Y08, in Mn form
分子名称: (E,2R,3R,4S,5R)-N-[[(3S)-1-cyclopropylcarbonylpiperidin-3-yl]methyl]-2-methoxy-8,8-dimethyl-3,4,5-tris(oxidanyl)non-6-enamide, MANGANESE (II) ION, Methionine aminopeptidase 1, ...
著者Ye, Q.Z, Xu, W.
登録日2012-06-14
公開日2012-09-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural analysis of bengamide derivatives as inhibitors of methionine aminopeptidases.
J.Med.Chem., 55, 2012

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon