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PDB: 81 results

8IYF
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BU of 8iyf by Molmil
Structure of VldE-H182A in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Validamine 7-phosphate valienyltransferase
Authors:Wong, C.P, Mori, T, Mahmud, T, Abe, I.
Deposit date:2023-04-04
Release date:2024-04-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of VldE-H182A in complex with GDP
To Be Published
8IYE
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BU of 8iye by Molmil
Structure of VldE-D158N in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Validamine 7-phosphate valienyltransferase
Authors:Wong, C.P, Mori, T, Mahmud, T, Abe, I.
Deposit date:2023-04-04
Release date:2024-04-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of VldE-D158N in complex with GDP
To Be Published
7Y5A
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BU of 7y5a by Molmil
Cryo-EM structure of the Mycolicibacterium smegmatis F1-ATPase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
Authors:Wong, C.F, Saw, W.-G, Grueber, G.
Deposit date:2022-06-16
Release date:2022-11-23
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural Elements Involved in ATP Hydrolysis Inhibition and ATP Synthesis of Tuberculosis and Nontuberculous Mycobacterial F-ATP Synthase Decipher New Targets for Inhibitors.
Antimicrob.Agents Chemother., 66, 2022
5N3W
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BU of 5n3w by Molmil
Crystal structure of LTA4H bound to a selective inhibitor against LTB4 generation
Descriptor: 3-[2-(2-hydroxyphenyl)ethyl]-5-methoxy-phenol, ACETATE ION, IMIDAZOLE, ...
Authors:Wong, C.T, Low, C.M, Snelgrove, R.J, Hare, S.A.
Deposit date:2017-02-09
Release date:2017-03-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The development of novel LTA4H modulators to selectively target LTB4 generation.
Sci Rep, 7, 2017
5EC6
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BU of 5ec6 by Molmil
The apo crystal structure of haemoglobin receptor HpuA from Kingella denitrificans
Descriptor: GLYCEROL, HpuA
Authors:Wong, C.T, Garnett, J.A, Hare, S.A.
Deposit date:2015-10-20
Release date:2015-11-04
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of haemoglobin binding by HpuA from the Neisseriaceae family.
Nat Commun, 6, 2015
5EE2
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BU of 5ee2 by Molmil
The crystal structure of the C-terminal beta-barrel of HpuA from Neisseria gonorrhoeae
Descriptor: Hemoglobin-haptoglobin-utilization protein
Authors:Wong, C.T, Hare, S.A.
Deposit date:2015-10-22
Release date:2015-11-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analysis of haemoglobin binding by HpuA from the Neisseriaceae family.
Nat Commun, 6, 2015
5EE4
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BU of 5ee4 by Molmil
The crystal structure of HpuA from Kingella denitrificans in complex with human haemoglobin
Descriptor: GLYCEROL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Wong, C.T, Hare, S.A.
Deposit date:2015-10-22
Release date:2015-11-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of haemoglobin binding by HpuA from the Neisseriaceae family.
Nat Commun, 6, 2015
5Y4G
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BU of 5y4g by Molmil
Apo Structure of AmbP3
Descriptor: AmbP3
Authors:Wong, C.P, Awakawa, T, Nakashima, Y.
Deposit date:2017-08-03
Release date:2018-07-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
5Y72
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BU of 5y72 by Molmil
DMSPP Bound AmbP3
Descriptor: AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE
Authors:Wong, C.P, Awakawa, T, Nakashima, Y.
Deposit date:2017-08-16
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
5Y84
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BU of 5y84 by Molmil
Hapalindole U and DMSPP Bound AmbP3
Descriptor: AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Hapalindole U
Authors:Wong, C.P, Awakawa, T, Nakashima, Y.
Deposit date:2017-08-18
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
5Y7C
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BU of 5y7c by Molmil
Hapalindole A and DMSPP Bound AmbP3
Descriptor: AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Hapalindole A
Authors:Wong, C.P, Awakawa, T, Nakashima, Y.
Deposit date:2017-08-16
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
3GJA
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BU of 3gja by Molmil
CytC3
Descriptor: ACETATE ION, CytC3
Authors:Wong, C, Drennan, C.L.
Deposit date:2009-03-08
Release date:2009-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of an open active site conformation of nonheme iron halogenase CytC3
J.Am.Chem.Soc., 131, 2009
3GJB
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BU of 3gjb by Molmil
CytC3 with Fe(II) and alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, ACETATE ION, CytC3, ...
Authors:Wong, C, Drennan, C.L.
Deposit date:2009-03-08
Release date:2009-04-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of an open active site conformation of nonheme iron halogenase CytC3
J.Am.Chem.Soc., 131, 2009
3U33
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BU of 3u33 by Molmil
Crystal Structure of the E. coli adaptive response protein AidB in the space group P3(2)
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Putative acyl-CoA dehydrogenase AidB
Authors:Wong, C, Jost, M, Drennan, C.L.
Deposit date:2011-10-04
Release date:2011-11-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Flavin-induced oligomerization in Escherichia coli adaptive response protein AidB.
Biochemistry, 50, 2011
3JCM
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BU of 3jcm by Molmil
Cryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNP
Descriptor: 13 kDa ribonucleoprotein-associated protein, GUANOSINE-5'-TRIPHOSPHATE, N,N,7-trimethylguanosine 5'-(trihydrogen diphosphate), ...
Authors:Wan, R, Yan, C, Bai, R, Wang, L, Huang, M, Wong, C.C, Shi, Y.
Deposit date:2015-12-23
Release date:2016-02-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The 3.8 angstrom structure of the U4/U6.U5 tri-snRNP: Insights into spliceosome assembly and catalysis
Science, 351, 2016
7OP7
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BU of 7op7 by Molmil
Bacteroides thetaiotaomicron mannosidase GH2 with beta-manno-configured N-alkyl cyclophellitol aziridine
Descriptor: (1R,2S,3R,4S,5R,6R)-5-(8-azidooctylamino)-6-(hydroxymethyl)cyclohexane-1,2,3,4-tetrol, 1,2-ETHANEDIOL, BROMIDE ION, ...
Authors:McGregor, N.G.S, Beenakker, T.J.M, Kuo, C, Wong, C, Offen, W.A, Armstrong, Z, Codee, J.D.C, Aerts, J.M.F.G, Florea, B.I, Overkleeft, H.S, Davies, G.J.
Deposit date:2021-05-29
Release date:2022-02-02
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Synthesis of broad-specificity activity-based probes for exo -beta-mannosidases.
Org.Biomol.Chem., 20, 2022
7OP6
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BU of 7op6 by Molmil
Bacteroides thetaiotaomicron mannosidase GH2 with beta-manno-configured cyclophellitol aziridine
Descriptor: (1~{R},2~{R},3~{S},4~{R},5~{R},6~{R})-5-(hydroxymethyl)-7-azabicyclo[4.1.0]heptane-2,3,4-triol, 1,2-ETHANEDIOL, BROMIDE ION, ...
Authors:McGregor, N.G.S, Beenakker, T.J.M, Kuo, C, Wong, C, Offen, W.A, Armstrong, Z, Codee, J.D.C, Aerts, J.M.F.G, Florea, B.I, Overkleeft, H.S, Davies, G.J.
Deposit date:2021-05-29
Release date:2022-05-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Synthesis of broad-specificity activity-based probes for exo -beta-mannosidases.
Org.Biomol.Chem., 20, 2022
6FIV
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BU of 6fiv by Molmil
STRUCTURAL STUDIES OF HIV AND FIV PROTEASES COMPLEXED WITH AN EFFICIENT INHIBITOR OF FIV PR
Descriptor: RETROPEPSIN, SULFATE ION, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
Authors:Li, M, Lee, T, Morris, G, Laco, G, Wong, C, Olson, A, Elder, J, Wlodawer, A, Gustchina, A.
Deposit date:1998-12-02
Release date:1998-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural studies of FIV and HIV-1 proteases complexed with an efficient inhibitor of FIV protease
Proteins, 38, 2000
7OMS
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BU of 7oms by Molmil
Bs164 in complex with mannocyclophellitol aziridine
Descriptor: (1~{R},2~{R},3~{S},4~{R},5~{R},6~{R})-5-(hydroxymethyl)-7-azabicyclo[4.1.0]heptane-2,3,4-triol, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:McGregor, N, Beenakker, T, Kuo, C.L, Wong, C.S, Offren, W.A, Armstrong, Z, Codee, J.D.C, Aerts, J.M.F.G, Florea, B.I, Overkleeft, H, Davies, G.J.
Deposit date:2021-05-24
Release date:2022-02-02
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Synthesis of broad-specificity activity-based probes for exo -beta-mannosidases.
Org.Biomol.Chem., 20, 2022
8ZI0
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BU of 8zi0 by Molmil
Cryo-EM reveals transition states of the Acinetobacter baumannii F1-ATPase rotary subunits gamma and epsilon and novel compound targets - Conformation 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Le, K.C.M, Wong, C.F, Gruber, G.
Deposit date:2024-05-12
Release date:2024-11-13
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Cryo-EM reveals transition states of the Acinetobacter baumannii F 1 -ATPase rotary subunits gamma and epsilon , unveiling novel compound targets.
Faseb J., 38, 2024
8ZI1
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BU of 8zi1 by Molmil
Cryo-EM reveals transition states of the Acinetobacter baumannii F1-ATPase rotary subunits gamma and epsilon and novel compound targets - Conformation 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Le, K.C.M, Wong, C.F, Gruber, G.
Deposit date:2024-05-12
Release date:2024-11-13
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Cryo-EM reveals transition states of the Acinetobacter baumannii F 1 -ATPase rotary subunits gamma and epsilon , unveiling novel compound targets.
Faseb J., 38, 2024
8ZI2
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BU of 8zi2 by Molmil
Cryo-EM reveals transition states of the Acinetobacter baumannii F1-ATPase rotary subunits gamma and epsilon and novel compound targets - Conformation 3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Le, K.C.M, Wong, C.F, Gruber, G.
Deposit date:2024-05-12
Release date:2024-11-13
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Cryo-EM reveals transition states of the Acinetobacter baumannii F 1 -ATPase rotary subunits gamma and epsilon , unveiling novel compound targets.
Faseb J., 38, 2024
8ZI3
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BU of 8zi3 by Molmil
Cryo-EM reveals transition states of the Acinetobacter baumannii F1-ATPase rotary subunits gamma and epsilon and novel compound targets - Conformation 4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Le, K.C.M, Wong, C.F, Gruber, G.
Deposit date:2024-05-12
Release date:2024-11-13
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Cryo-EM reveals transition states of the Acinetobacter baumannii F 1 -ATPase rotary subunits gamma and epsilon , unveiling novel compound targets.
Faseb J., 38, 2024
7Y5B
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BU of 7y5b by Molmil
Cryo-EM structure of F-ATP synthase from Mycolicibacterium smegmatis (rotational state 1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Saw, W.-G, Wong, C.F, Grueber, G.
Deposit date:2022-06-16
Release date:2022-11-23
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural Elements Involved in ATP Hydrolysis Inhibition and ATP Synthesis of Tuberculosis and Nontuberculous Mycobacterial F-ATP Synthase Decipher New Targets for Inhibitors.
Antimicrob.Agents Chemother., 66, 2022
7Y5C
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BU of 7y5c by Molmil
Cryo-EM structure of F-ATP synthase from Mycolicibacterium smegmatis (rotational state 2)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Saw, W.-G, Wong, C.F, Grueber, G.
Deposit date:2022-06-16
Release date:2022-11-23
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structural Elements Involved in ATP Hydrolysis Inhibition and ATP Synthesis of Tuberculosis and Nontuberculous Mycobacterial F-ATP Synthase Decipher New Targets for Inhibitors.
Antimicrob.Agents Chemother., 66, 2022

 

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