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PDB: 80 results

7CNU
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BU of 7cnu by Molmil
Crystal structure of DLC2 in complex with BMF peptide
Descriptor: Bcl-2-modifying factor, Dynein light chain 2, cytoplasmic
Authors:Wen, Y, Shao, Y.
Deposit date:2020-08-03
Release date:2021-08-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Non-canonical phosphorylation of Bmf by p38 MAPK promotes its apoptotic activity in anoikis.
Cell Death Differ., 29, 2022
8JWY
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BU of 8jwy by Molmil
Crystal structure of A2AR-T4L in complex with 2-118
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3-[2-azanyl-6-[2-oxidanylidene-1-[[6-(2-oxidanylpropan-2-yl)pyridin-2-yl]methyl]pyridin-4-yl]pyrimidin-4-yl]-2-methyl-benzenecarbonitrile, Adenosine receptor A2a,Endolysin, ...
Authors:Weng, Y, Chen, Y, Xu, Y, Song, G.
Deposit date:2023-06-29
Release date:2023-08-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural insight into the dual-antagonistic mechanism of AB928 on adenosine A 2 receptors.
Sci China Life Sci, 67, 2024
8JWZ
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BU of 8jwz by Molmil
Crystal structure of A2AR-T4L in complex with AB928
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3-[2-azanyl-6-[1-[[6-(2-oxidanylpropan-2-yl)pyridin-2-yl]methyl]-1,2,3-triazol-4-yl]pyrimidin-4-yl]-2-methyl-benzenecarbonitrile, Adenosine receptor A2a,Endolysin, ...
Authors:Weng, Y, Chen, Y, Xu, Y, Song, G.
Deposit date:2023-06-29
Release date:2023-08-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structural insight into the dual-antagonistic mechanism of AB928 on adenosine A 2 receptors.
Sci China Life Sci, 67, 2024
3BM9
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BU of 3bm9 by Molmil
Discovery of Benzisoxazoles as Potent Inhibitors of Chaperone Hsp90
Descriptor: 4-bromo-6-(6-hydroxy-1,2-benzisoxazol-3-yl)benzene-1,3-diol, Heat shock protein HSP 90-alpha
Authors:Gopalsamy, A, Shi, M, Vogan, E.M, Golas, J, Jacob, J, Johnson, J, Lee, F, Nilakantan, R, Peterson, R, Svenson, K, Tam, M.S, Wen, Y, Chopra, R, Ellingboe, J, Arndt, K, Boschelli, F.
Deposit date:2007-12-12
Release date:2008-07-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery of benzisoxazoles as potent inhibitors of chaperone heat shock protein 90.
J.Med.Chem., 51, 2008
3BMY
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BU of 3bmy by Molmil
Discovery of Benzisoxazoles as Potent Inhibitors of Chaperone Hsp90
Descriptor: 4-chloro-6-{5-[(2-morpholin-4-ylethyl)amino]-1,2-benzisoxazol-3-yl}benzene-1,3-diol, Heat shock protein HSP 90-alpha
Authors:Gopalsamy, A, Shi, M, Vogan, E.M, Golas, J, Jacob, J, Johnson, J, Lee, F, Nilakantan, R, Peterson, R, Svenson, K, Tam, M.S, Wen, Y, Chopra, R, Ellingboe, J, Arndt, K, Boschelli, F.
Deposit date:2007-12-13
Release date:2008-07-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery of benzisoxazoles as potent inhibitors of chaperone heat shock protein 90.
J.Med.Chem., 51, 2008
6UZT
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BU of 6uzt by Molmil
Crystal Structure of RPTP alpha
Descriptor: Receptor-type tyrosine-protein phosphatase alpha
Authors:Santelli, E, Wen, Y, Yang, S, Svensson, M.N.D, Stanford, S.M, Bottini, N.
Deposit date:2019-11-15
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:RPTP alpha phosphatase activity is allosterically regulated by the membrane-distal catalytic domain.
J.Biol.Chem., 295, 2020
5MJ4
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BU of 5mj4 by Molmil
INTERLEUKIN-23 COMPLEX WITH AN ANTAGONISTIC ALPHABODY, CRYSTAL FORM 2
Descriptor: ALPHABODY MA12, Interleukin-12 subunit beta, Interleukin-23 subunit alpha, ...
Authors:Desmet, J, Verstraete, K, Bloch, Y, Lorent, E, Wen, Y, Devreese, B, Vandenbroucke, K, Loverix, S, Hettmann, T, Deroo, S, Somers, K, Henderikx, P, Lasters, I, Savvides, S.
Deposit date:2016-11-29
Release date:2017-01-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:STRUCTURAL BASIS OF IL-23 ANTAGONISM BY AN ALPHABODY PROTEIN
Nature Communications, 5, 2014
5MJ3
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BU of 5mj3 by Molmil
INTERLEUKIN-23 COMPLEX WITH AN ANTAGONISTIC ALPHABODY, CRYSTAL FORM 1
Descriptor: ALPHABODY MA12, Interleukin-12 subunit beta, Interleukin-23 subunit alpha, ...
Authors:Desmet, J, Verstraete, K, Bloch, Y, Lorent, E, Wen, Y, Devreese, B, Vandenbroucke, K, Loverix, S, Hettmann, T, Deroo, S, Somers, K, Hendrikx, P, Lasters, I, Savvides, S.N.
Deposit date:2016-11-29
Release date:2017-01-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural Basis Of Il-23 Antagonism By An Alphabody Protein Scaffold.
Nat Commun, 5, 2014
8WEO
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BU of 8weo by Molmil
Bacteroides fragilis toxin in complex with neutralization nanobody
Descriptor: Fragilysin, NB243, ZINC ION
Authors:Guo, Y, Wen, Y.
Deposit date:2023-09-18
Release date:2024-09-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Bacteroides fragilis toxin in complex with neutralization nanobody
To Be Published
8WEN
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BU of 8wen by Molmil
Bacteroides fragilis toxin 2
Descriptor: Metalloprotease, SODIUM ION, ZINC ION
Authors:Guo, Y, Wen, Y.
Deposit date:2023-09-18
Release date:2024-09-25
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Bacteroides fragilis toxin 2
To Be Published
6NSJ
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BU of 6nsj by Molmil
CryoEM structure of Helicobacter pylori urea channel in closed state
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, Acid-activated urea channel
Authors:Cui, Y.X, Zhou, K, Strugatsky, D, Wen, Y, Sachs, G, Munson, K, Zhou, Z.H.
Deposit date:2019-01-24
Release date:2019-04-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:pH-dependent gating mechanism of theHelicobacter pyloriurea channel revealed by cryo-EM.
Sci Adv, 5, 2019
6NSK
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BU of 6nsk by Molmil
CryoEM structure of Helicobacter pylori urea channel in open state.
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, Acid-activated urea channel
Authors:Cui, Y.X, Zhou, K, Strugatsky, D, Wen, Y, Sachs, G, Munson, K, Zhou, Z.H.
Deposit date:2019-01-24
Release date:2019-04-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:pH-dependent gating mechanism of theHelicobacter pyloriurea channel revealed by cryo-EM.
Sci Adv, 5, 2019
8WEM
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BU of 8wem by Molmil
Bacteroides fragilis toxin 1
Descriptor: Fragilysin, ZINC ION
Authors:Guo, Y, Wen, Y.
Deposit date:2023-09-18
Release date:2024-09-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bacteroides fragilis toxin 1
To Be Published
8IMW
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BU of 8imw by Molmil
Crystal structure of response regulator PmrA receiver domain
Descriptor: Transcriptional regulator
Authors:Ouyang, Z, Wen, Y.
Deposit date:2023-03-07
Release date:2024-03-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mechanistic and biophysical characterization of polymyxin resistance response regulator PmrA in Acinetobacter baumannii.
Front Microbiol, 15, 2024
2KDY
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BU of 2kdy by Molmil
NMR structure of LP2086-B01
Descriptor: Factor H binding protein variant B01_001
Authors:Mascioni, A, Bentley, B.E, Camarda, R, Dilts, D.A, Fink, P, Gusarova, V, Hoiseth, S, Jacob, J, Lin, S.L, Malakian, K, McNeil, L.K, Mininni, T, Moy, F, Murphy, E, Novikova, E, Sigethy, S, Wen, Y, Zlotnick, G.W, Tsao, D.H.H.
Deposit date:2009-01-20
Release date:2009-02-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Basis for the Immunogenic Properties of the Meningococcal Vaccine Candidate LP2086.
J.Biol.Chem., 284, 2009
7YRJ
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BU of 7yrj by Molmil
S-adenosylmethionine sensor upstream of mTORC1
Descriptor: S-adenosylmethionine sensor upstream of mTORC1, SINEFUNGIN
Authors:Zhang, H, Li, X.Z, Wen, Y.N.
Deposit date:2022-08-10
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:S-adenosylmethionine sensor upstream of mTORC1
To Be Published
7YRI
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BU of 7yri by Molmil
S-adenosylmethionine sensor upstream of mTORC1
Descriptor: S-ADENOSYLMETHIONINE, S-adenosylmethionine sensor upstream of mTORC1
Authors:Zhang, H, Li, X.Z, Wen, Y.N.
Deposit date:2022-08-10
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:S-adenosylmethionine sensor upstream of mTORC1
To Be Published
2MUX
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BU of 2mux by Molmil
SUMO2 non-covalently interacts with USP25 and downregulates its activity
Descriptor: Ubiquitin carboxyl-terminal hydrolase 25
Authors:Shi, L, Zhang, N, Wen, Y.
Deposit date:2014-09-18
Release date:2016-04-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:SUMO2 non-covalently interacts with USP25 and downregulates its activity
To be Published
7VPH
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BU of 7vph by Molmil
Crystal structure of the C-terminal tail of SARS-CoV-2 Orf6 complex with human nucleoporin pair Rae1-Nup98
Descriptor: Isoform 3 of Nuclear pore complex protein Nup98-Nup96, ORF6 protein, mRNA export factor
Authors:Li, T, Guo, H, Yang, T, Wen, Y, Ji, X.
Deposit date:2021-10-17
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular Mechanism of SARS-CoVs Orf6 Targeting the Rae1-Nup98 Complex to Compete With mRNA Nuclear Export.
Front Mol Biosci, 8, 2021
6KCZ
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BU of 6kcz by Molmil
Solution structure of the ZnF-UBP domain of USP20/VDU2
Descriptor: Ubiquitin carboxyl-terminal hydrolase 20, ZINC ION
Authors:Yang, Y, Wen, Y, Zhang, N.
Deposit date:2019-06-30
Release date:2019-07-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and functional studies of USP20 ZnF-UBP domain by NMR.
Protein Sci., 28, 2019
8GMZ
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BU of 8gmz by Molmil
Structure of methyltransferase
Descriptor: methyltransferase
Authors:Zhang, H, Li, X.Z, Wen, Y.N.
Deposit date:2022-08-22
Release date:2023-08-30
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structure of methyltransferase
To Be Published
8GMY
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BU of 8gmy by Molmil
Structure of methyltransferase
Descriptor: methyltransferase
Authors:Zhang, H, Li, X.Z, Wen, Y.N.
Deposit date:2022-08-22
Release date:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of methyltransferase
To Be Published
3QBE
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BU of 3qbe by Molmil
Crystal structure of the 3-Dehydroquinate Synthase (aroB) from Mycobacterium tuberculosis
Descriptor: 3-dehydroquinate synthase, CHLORIDE ION, ZINC ION
Authors:Cheng, W.C, Wen, Y.H, Wang, W.C.
Deposit date:2011-01-13
Release date:2012-01-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of the 3-Dehydroquinate Synthase (aroB) from Mycobacterium tuberculosis
To be Published
7VPG
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BU of 7vpg by Molmil
Crystal structure of the C-terminal tail of SARS-CoV-1 Orf6 complex with human nucleoporin pair Rae1-Nup98
Descriptor: Isoform 3 of Nuclear pore complex protein Nup98-Nup96, ORF6 protein, mRNA export factor
Authors:Li, T, Guo, H, Yang, T, Wen, Y, Ji, X.
Deposit date:2021-10-17
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Molecular Mechanism of SARS-CoVs Orf6 Targeting the Rae1-Nup98 Complex to Compete With mRNA Nuclear Export.
Front Mol Biosci, 8, 2021
3P50
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BU of 3p50 by Molmil
Structure of propofol bound to a pentameric ligand-gated ion channel, GLIC
Descriptor: 2,6-BIS(1-METHYLETHYL)PHENOL, DIUNDECYL PHOSPHATIDYL CHOLINE, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Nury, H, Van Renterghem, C, Weng, Y, Tran, A, Baaden, M, Dufresne, V, Changeux, J.P, Sonner, J.M, Delarue, M, Corringer, P.J.
Deposit date:2010-10-07
Release date:2011-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:X-ray structures of general anaesthetics bound to a pentameric ligand-gated ion channel
Nature, 469, 2011

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数据于2024-10-30公开中

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