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PDB: 107 results

7XYB
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The cryo-EM structure of an AlpA-loaded complex
Descriptor: AlpA, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Wen, A, Feng, Y.
Deposit date:2022-06-01
Release date:2022-07-20
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of AlpA-dependent transcription antitermination.
Nucleic Acids Res., 50, 2022
7XYA
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The cryo-EM structure of an AlpA-loading complex
Descriptor: AlpA, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Wen, A, Feng, Y.
Deposit date:2022-06-01
Release date:2022-07-20
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of AlpA-dependent transcription antitermination.
Nucleic Acids Res., 50, 2022
6TQT
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The crystal structure of the MSP domain of human MOSPD2.
Descriptor: 1,2-ETHANEDIOL, Motile sperm domain-containing protein 2, PHOSPHATE ION
Authors:McEwen, A.G, Poussin-Courmontagne, P, Di Mattia, T, Wendling, C, Cavarelli, J, Tomasetto, C, Alpy, F.
Deposit date:2019-12-17
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:FFAT motif phosphorylation controls formation and lipid transfer function of inter-organelle contacts.
Embo J., 39, 2020
6TQR
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The crystal structure of the MSP domain of human VAP-A in complex with the Phospho-FFAT motif of STARD3.
Descriptor: CHLORIDE ION, StAR-related lipid transfer protein 3, Vesicle-associated membrane protein-associated protein A
Authors:McEwen, A.G, Poussin-Courmontagne, P, Di Mattia, T, Wendling, C, Cavarelli, J, Tomasetto, C, Alpy, F.
Deposit date:2019-12-17
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:FFAT motif phosphorylation controls formation and lipid transfer function of inter-organelle contacts.
Embo J., 39, 2020
6Z0M
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Het-Ncap - De novo designed three-helix heterodimer with Cysteine at the Ncap position of the alpha-helix
Descriptor: Cys-Ncap strand, Positive Strand, SULFATE ION, ...
Authors:McEwen, A.G, Poussin-Courmontagne, P, Naudin, E.A, DeGrado, W.F, Torbeev, V.
Deposit date:2020-05-09
Release date:2021-03-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Acyl Transfer Catalytic Activity in De Novo Designed Protein with N-Terminus of alpha-Helix As Oxyanion-Binding Site.
J.Am.Chem.Soc., 143, 2021
6Z0L
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Het-N2 - De novo designed three-helix heterodimer with Cysteine at the N2 position of the alpha-helix
Descriptor: CADMIUM ION, Cys-N2 Strand, Positive Strand, ...
Authors:McEwen, A.G, Poussin-Courmontagne, P, Naudin, E.A, DeGrado, W.F, Torbeev, V.
Deposit date:2020-05-09
Release date:2021-03-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Acyl Transfer Catalytic Activity in De Novo Designed Protein with N-Terminus of alpha-Helix As Oxyanion-Binding Site.
J.Am.Chem.Soc., 143, 2021
6TQU
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The crystal structure of the MSP domain of human MOSPD2 in complex with the Phospho-FFAT motif of STARD3.
Descriptor: Motile sperm domain-containing protein 2, SULFATE ION, StAR-related lipid transfer protein 3
Authors:McEwen, A.G, Poussin-Courmontagne, P, Di Mattia, T, Wendling, C, Cavarelli, J, Tomasetto, C, Alpy, F.
Deposit date:2019-12-17
Release date:2020-11-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:FFAT motif phosphorylation controls formation and lipid transfer function of inter-organelle contacts.
Embo J., 39, 2020
6TQS
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The crystal structure of the MSP domain of human MOSPD2 in complex with the conventional FFAT motif of ORP1.
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:McEwen, A.G, Poussin-Courmontagne, P, Di Mattia, T, Wendling, C, Cavarelli, J, Tomasetto, C, Alpy, F.
Deposit date:2019-12-17
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:FFAT motif phosphorylation controls formation and lipid transfer function of inter-organelle contacts.
Embo J., 39, 2020
6FBR
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Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human MEp DR1 Response Element, pH 4.2
Descriptor: DI(HYDROXYETHYL)ETHER, DNA (5'-D(*CP*TP*GP*GP*GP*TP*CP*AP*AP*AP*GP*TP*TP*CP*AP*TP*C)-3'), DNA (5'-D(*GP*AP*TP*GP*AP*AP*CP*TP*TP*TP*GP*AP*CP*CP*CP*AP*G)-3'), ...
Authors:McEwen, A.G, Poussin-Courmontagne, P, Osz, J, Rochel, N.
Deposit date:2017-12-19
Release date:2018-12-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Modulation of RXR-DNA complex assembly by DNA context.
Mol. Cell. Endocrinol., 481, 2019
7OON
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BU of 7oon by Molmil
The X-ray structure of heme-bound murine HEBP1
Descriptor: Heme-binding protein 1, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:McEwen, A.G, Poussin-Courmontagne, P, Birck, C, Goodfellow, B.J.
Deposit date:2021-05-28
Release date:2022-01-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The SOUL family of heme-binding proteins: Structure and function 15 years later
Coord. Chem. Rev, 448, 2021
6FBQ
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Crystal Structure of the Human Retinoid X Receptor DNA-Binding Domain Bound to the Human MEp DR1 Response Element, pH 7.0
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, DNA (5'-D(*CP*TP*GP*GP*GP*TP*CP*AP*AP*AP*GP*TP*TP*CP*AP*TP*C)-3'), DNA (5'-D(*GP*AP*TP*GP*AP*AP*CP*TP*TP*TP*GP*AP*CP*CP*CP*AP*G)-3'), ...
Authors:McEwen, A.G, Poussin-Courmontagne, P, Osz, J, Rochel, N.
Deposit date:2017-12-19
Release date:2018-12-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Modulation of RXR-DNA complex assembly by DNA context.
Mol. Cell. Endocrinol., 481, 2019
5FNO
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BU of 5fno by Molmil
Manganese Lipoxygenase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MANGANESE (II) ION, ...
Authors:Wennman, A, Karkehabadi, S, Oliw, E.H, Chen, Y.
Deposit date:2015-11-16
Release date:2016-01-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.038 Å)
Cite:Crystal Structure of Manganese Lipoxygenase of the Rice Blast Fungus Magnaporthe Oryzae
J.Biol.Chem., 291, 2016
7BEY
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BU of 7bey by Molmil
Het-N2-SO3- - De novo designed three-helix heterodimer with Cysteine S-sulfate at the N2 position of the alpha-helix
Descriptor: 'Cys-N2-SO3-' Strand, 'Positive' Strand, SULFATE ION
Authors:McEwen, A.G, Poussin-Courmontagne, P, Naudin, E.A, DeGrado, W.F, Torbeev, V.
Deposit date:2021-01-06
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Acyl Transfer Catalytic Activity in De Novo Designed Protein with N-Terminus of alpha-Helix As Oxyanion-Binding Site.
J.Am.Chem.Soc., 143, 2021
6ZWK
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BU of 6zwk by Molmil
Crystal structure of the phosphorylated C-terminal tail of histone H2AX in complex with a specific nanobody (C6 gammaXbody)
Descriptor: CHLORIDE ION, Histone H2AX, SODIUM ION, ...
Authors:McEwen, A.G, Moeglin, E, Desplancq, D, Weiss, E, Poterszman, A.
Deposit date:2020-07-28
Release date:2021-07-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A Novel Nanobody Precisely Visualizes Phosphorylated Histone H2AX in Living Cancer Cells under Drug-Induced Replication Stress.
Cancers (Basel), 13, 2021
8OIG
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BU of 8oig by Molmil
Crystal Structure of Staphopain C from Staphylococcus aureus
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:McEwen, A.G, Magoch, M, Napolitano, V, Dubin, G, Wladyka, B.
Deposit date:2023-03-22
Release date:2023-06-21
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal Structure of Staphopain C from Staphylococcus aureus.
Molecules, 28, 2023
6XWH
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BU of 6xwh by Molmil
Crystal Structure of the Human RXR DNA-Binding Domain Homodimer Bound to the Human Hoxb13 DR0 Response Element
Descriptor: Hoxb13 DR0 Response Element, 3'-5' strand, 5'-3' strand, ...
Authors:McEwen, A.G, Poussin-Courmontagne, P, Peluso-Iltis, C, Rochel, N.
Deposit date:2020-01-23
Release date:2020-09-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for DNA recognition and allosteric control of the retinoic acid receptors RAR-RXR.
Nucleic Acids Res., 48, 2020
6XWG
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BU of 6xwg by Molmil
Crystal Structure of the Human RXR/RAR DNA-Binding Domain Heterodimer Bound to the Human RARb2 DR5 Response Element
Descriptor: CHLORIDE ION, GLYCEROL, RARb2 DR5 Response Element, ...
Authors:McEwen, A.G, Poussin-Courmontagne, P, Peluso-Iltis, C, Rochel, N.
Deposit date:2020-01-23
Release date:2020-09-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for DNA recognition and allosteric control of the retinoic acid receptors RAR-RXR.
Nucleic Acids Res., 48, 2020
8OMV
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BU of 8omv by Molmil
Crystal structure of the constitutively active S117E/S181E mutant of human IKK2
Descriptor: Inhibitor of nuclear factor kappa-B kinase subunit beta
Authors:McEwen, A.G, Li, C, Moro, S, Poussin-Courmontagne, P, Zanier, K.
Deposit date:2023-03-31
Release date:2024-04-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (4.16 Å)
Cite:Molecular mechanism of IKK catalytic dimer docking to NF-kappa B substrates.
Nat Commun, 15, 2024
2X98
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H.SALINARUM ALKALINE PHOSPHATASE
Descriptor: ALKALINE PHOSPHATASE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Wende, A, Johansson, P, Grininger, M, Oesterhelt, D.
Deposit date:2010-03-14
Release date:2010-05-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Biochemical Characterization of a Halophilic Archaeal Alkaline Phosphatase.
J.Mol.Biol., 400, 2010
4GIZ
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BU of 4giz by Molmil
Crystal structure of full-length human papillomavirus oncoprotein E6 in complex with LXXLL peptide of ubiquitin ligase E6AP at 2.55 A resolution
Descriptor: Maltose-binding periplasmic protein, UBIQUITIN LIGASE EA6P: chimeric protein, Protein E6, ...
Authors:McEwen, A.G, Zanier, K, Charbonnier, S, Poussin, P, Cura, V, Vande Pol, S, Trave, G, Cavarelli, J.
Deposit date:2012-08-09
Release date:2013-01-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural basis for hijacking of cellular LxxLL motifs by papillomavirus E6 oncoproteins.
Science, 339, 2013
6M6B
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BU of 6m6b by Molmil
Cryo-EM structure of Thermus thermophilus Mfd in complex with RNA polymerase and ATP-gamma-S
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Shi, J, Wen, A, Feng, Y.
Deposit date:2020-03-14
Release date:2020-10-14
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis of Mfd-dependent transcription termination.
Nucleic Acids Res., 48, 2020
6M6A
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BU of 6m6a by Molmil
Cryo-EM structure of Thermus thermophilus Mfd in complex with RNA polymerase
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Shi, J, Wen, A, Feng, Y.
Deposit date:2020-03-14
Release date:2020-10-14
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Structural basis of Mfd-dependent transcription termination.
Nucleic Acids Res., 48, 2020
6LSA
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BU of 6lsa by Molmil
Complex structure of bovine herpesvirus 1 glycoprotein D and bovine nectin-1 IgV
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein D, ...
Authors:Yue, D, Chen, Z.J, Yang, F.L, Ye, F, Lin, S, Cheng, Y.W, Wang, J.C, Chen, Z.M, Lin, X, Yang, J, Chen, H, Zhang, Z.L, You, Y, Sun, H.L, Wen, A, Wang, L.L, Zheng, Y, Cao, Y, Li, Y.H, Lu, G.W.
Deposit date:2020-01-17
Release date:2020-06-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Crystal structure of bovine herpesvirus 1 glycoprotein D bound to nectin-1 reveals the basis for its low-affinity binding to the receptor.
Sci Adv, 6, 2020
6LS9
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Crystal structure of bovine herpesvirus 1 glycoprotein D
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein D
Authors:Yue, D, Chen, Z.J, Yang, F.L, Ye, F, Lin, S, Cheng, Y.W, Wang, J.C, Chen, Z.M, Lin, X, Yang, J, Chen, H, Zhang, Z.L, You, Y, Sun, H.L, Wen, A, Wang, L.L, Zheng, Y, Cao, Y, Li, Y.H, Lu, G.W.
Deposit date:2020-01-17
Release date:2020-06-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Crystal structure of bovine herpesvirus 1 glycoprotein D bound to nectin-1 reveals the basis for its low-affinity binding to the receptor.
Sci Adv, 6, 2020
6M6C
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BU of 6m6c by Molmil
CryoEM structure of Thermus thermophilus RNA polymerase elongation complex
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Shi, J, Wen, A, Feng, Y.
Deposit date:2020-03-14
Release date:2020-10-14
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of Mfd-dependent transcription termination.
Nucleic Acids Res., 48, 2020

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