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PDB: 933 results

1Q4V
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CRYSTAL STRUCTURE OF ALLO-ILEA2-INSULIN, AN INACTIVE CHIRAL ANALOGUE: IMPLICATIONS FOR THE MECHANISM OF RECEPTOR
Descriptor: Insulin, PHENOL, ZINC ION
Authors:Wan, Z.L, Xu, B, Chu, Y.C, Katsoyannis, P.G, Weiss, M.A.
Deposit date:2003-08-04
Release date:2003-08-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of allo-Ile(A2)-insulin, an inactive chiral analogue: implications for the mechanism of receptor binding.
Biochemistry, 42, 2003
6YNQ
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BU of 6ynq by Molmil
Structure of SARS-CoV-2 Main Protease bound to 2-Methyl-1-tetralone.
Descriptor: (2~{S})-2-methyl-3,4-dihydro-2~{H}-naphthalen-1-one, 3C-like proteinase, CHLORIDE ION, ...
Authors:Guenther, S, Reinke, P, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Paulraj, L.X, Ullah, N, Falke, S, Alves Franca, B, Schwinzer, M, Brognaro, H, Werner, N, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Doyle, J.J, Giseler, H, Melo, D, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
Deposit date:2020-04-14
Release date:2020-04-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
4US7
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BU of 4us7 by Molmil
Sulfur SAD Phased Structure of a Type IV Pilus Protein from Shewanella oneidensis
Descriptor: PILD PROCESSED PROTEIN, SODIUM ION, SULFATE ION
Authors:Gorgel, M, Boeggild, A, Ulstrup, J.J, Mueller, U, Weiss, M, Nissen, P, Boesen, T.
Deposit date:2014-07-03
Release date:2015-04-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:High-Resolution Structure of a Type Iv Pilin from the Metal- Reducing Bacterium Shewanella Oneidensis.
Bmc Struct.Biol., 15, 2015
6YVF
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BU of 6yvf by Molmil
Structure of SARS-CoV-2 Main Protease bound to AZD6482.
Descriptor: 2-[[(1R)-1-(7-methyl-2-morpholin-4-yl-4-oxidanylidene-pyrido[1,2-a]pyrimidin-9-yl)ethyl]amino]benzoic acid, 3C-like proteinase, CALCIUM ION, ...
Authors:Guenther, S, Reinke, P, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Paulraj, L.X, Ullah, N, Falke, S, Alves Franca, B, Schwinzer, M, Brognaro, H, Werner, N, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Doyle, J.J, Giseler, H, Melo, D, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
Deposit date:2020-04-28
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
8OGM
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BU of 8ogm by Molmil
Crystal structure of CdaA from Bacillus subtilis
Descriptor: Cyclic di-AMP synthase CdaA
Authors:Garbers, T.B, Neumann, P, Weiss, M.S, Wollenhaupt, J, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of CdaA from Bacillus subtilis
To Be Published
8OGN
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BU of 8ogn by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A09
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, [1,2]thiazolo[5,4-b]pyridin-3-amine
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:CdaA in complex with fragment F2X-Entry A09
To Be Published
5WBT
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BU of 5wbt by Molmil
Solution Structure and Dynamics of an Ultra-Stable Single-Chain Insulin Analog STUDIES OF AN ENGINEERED MONOMER AND IMPLICATIONS FOR RECEPTOR BINDING
Descriptor: Insulin
Authors:Glidden, M.D, Yang, Y, Wickramasinghe, N.P, Weiss, M.A.
Deposit date:2017-06-29
Release date:2017-11-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of an ultra-stable single-chain insulin analog connects protein dynamics to a novel mechanism of receptor binding.
J. Biol. Chem., 293, 2018
8PH4
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BU of 8ph4 by Molmil
Co-Crystal structure of the SARS-CoV2 main protease Nsp5 with an Uracil-carrying X77-like inhibitor
Descriptor: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, MALONATE ION, ...
Authors:Barthel, T, Altincekic, N, Jores, N, Wollenhaupt, J, Weiss, M.S, Schwalbe, H.
Deposit date:2023-06-18
Release date:2024-01-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Targeting the Main Protease (M pro , nsp5) by Growth of Fragment Scaffolds Exploiting Structure-Based Methodologies.
Acs Chem.Biol., 19, 2024
3V19
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BU of 3v19 by Molmil
Forestalling insulin fibrillation by insertion of a chiral clamp mechanism-based application of protein engineering to global health
Descriptor: CHLORIDE ION, Insulin, PHENOL, ...
Authors:Wan, Z.L, Hua, Q.X, Wickramasinghe, N.P, Huang, K, Petkova, A.T, Hu, S.Q, Phillips, N.B, Yeh, I.J, Whittake, J, Ismail-Beigi, F, Katsoyyannis, P.G, Tycko, R, Weiss, M.A.
Deposit date:2011-12-09
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Forestalling insulin fibrillation by insertion of a chiral clamp mechanism-based application of protein engineering to global health
To be Published
3V1G
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BU of 3v1g by Molmil
Forestalling insulin fibrillation by insertion of a chiral clamp mechanism-based application of protein engineering to global health
Descriptor: CHLORIDE ION, Insulin, PHENOL, ...
Authors:Wan, Z.L, Hua, Q.X, Wickramasinghe, N.P, Huang, K, Petkova, A.T, Hu, S.Q, Phillips, N.B, Yeh, I.J, Whittake, J, Ismail-Beigi, F, Katsoyyannis, P.G, Tycko, R, Weiss, M.A.
Deposit date:2011-12-09
Release date:2012-12-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Forestalling insulin fibrillation by insertion of a chiral clamp mechanism-based application of protein engineering to global health
To be Published
3H5E
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BU of 3h5e by Molmil
LeuD_1-156 small subunit of isopropylmalate isomerase (Rv2987c) from mycobacterium tuberculosis
Descriptor: 3-isopropylmalate dehydratase small subunit
Authors:Manikandan, K, Geerlof, A, Weiss, M.S.
Deposit date:2009-04-22
Release date:2010-04-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural studies on the enzyme complex isopropylmalate isomerase (LeuCD) from Mycobacterium tuberculosis
Proteins, 79, 2011
8OGP
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BU of 8ogp by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B03
Descriptor: 2-[(1~{S})-1-azanylpropyl]phenol, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B03
To Be Published
8OGR
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BU of 8ogr by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B07
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, N-[3-(diethylamino)phenyl]ethanamide
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B07
To Be Published
8OGU
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BU of 8ogu by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C07
Descriptor: 3,4-dihydro-1~{H}-quinolin-2-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C07
To Be Published
8OGW
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BU of 8ogw by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D02
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, ~{N}-[5-azanyl-2,4-bis(fluoranyl)phenyl]propane-1-sulfonamide
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D02
To Be Published
8OH1
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BU of 8oh1 by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry E04
Descriptor: 3-phenyl-1,2-oxazol-5-amine, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry E04
To Be Published
3H5J
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BU of 3h5j by Molmil
LeuD_1-168 small subunit of isopropylmalate isomerase (Rv2987c) from mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, 3-isopropylmalate dehydratase small subunit, SULFATE ION
Authors:Manikandan, K, Geerlof, A, Weiss, M.S.
Deposit date:2009-04-22
Release date:2010-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural studies on the enzyme complex isopropylmalate isomerase (LeuCD) from Mycobacterium tuberculosis
Proteins, 79, 2011
8OGO
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BU of 8ogo by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A12
Descriptor: 3-(propan-2-yl)-1,2,4-oxadiazol-5(4H)-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A12
To Be Published
8OGS
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BU of 8ogs by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B08
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, ethyl 1,3-dihydro-2H-pyrrolo[3,4-c]pyridine-2-carboxylate
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B08
To Be Published
8OGY
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BU of 8ogy by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D04
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, methyl 4-fluoro-L-phenylalaninate
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D04
To Be Published
8OGQ
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BU of 8ogq by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B06
Descriptor: (1S)-1-(4-nitrophenyl)ethan-1-ol, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B06
To Be Published
8OGT
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BU of 8ogt by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C04
Descriptor: 2-hydrazinyl-4-methoxypyrimidine, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C04
To Be Published
8OGV
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BU of 8ogv by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C08
Descriptor: (3S)-3-hydroxy-2-methyl-2,3-dihydro-1H-isoindol-1-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry C08
To Be Published
8OH0
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BU of 8oh0 by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D08
Descriptor: 1-(2-ethylsulfonylethyl)-1,3,3-trimethyl-urea, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D08
To Be Published
8OGZ
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BU of 8ogz by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D06
Descriptor: (3-methoxyphenyl)-pyrrol-1-yl-methanone, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D06
To Be Published

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