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PDB: 45 件

4RSG
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BU of 4rsg by Molmil
Neutron crystal structure of Ras bound to the GTP analogue GppNHp
分子名称: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Knihtila, R.R, Holzapfel, G, Weiss, K.L, Meilleur, F, Mattos, C.
登録日2014-11-07
公開日2015-11-04
最終更新日2024-02-28
実験手法NEUTRON DIFFRACTION (1.907 Å)
主引用文献Neutron Crystal Structure of RAS GTPase Puts in Question the Protonation State of the GTP gamma-Phosphate.
J.Biol.Chem., 290, 2015
6UFE
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BU of 6ufe by Molmil
The structure of a potassium selective ion channel at atomic resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Transporter
著者Langan, P.S, Vandavasi, V.G, Sullivan, B, Afonine, P.V, Weiss, K.L.
登録日2019-09-24
公開日2020-08-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The structure of a potassium-selective ion channel reveals a hydrophobic gate regulating ion permeation.
Iucrj, 7, 2020
6DZ1
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BU of 6dz1 by Molmil
Studies of Ion Transport in K+ Channels
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein
著者Langan, P.S, Vandavasi, V.G, Weiss, K.L, Wagner, A, Duman, R, El Omari, K, Afonine, P.V, Coates, L.
登録日2018-07-02
公開日2018-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Anomalous X-ray diffraction studies of ion transport in K+channels.
Nat Commun, 9, 2018
6V8Y
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BU of 6v8y by Molmil
Structure of a Sodium Potassium ion Channel
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein, ...
著者Roy, R, Weiss, K.L, Coates, L.
登録日2019-12-12
公開日2021-04-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structural plasticity of the selectivity filter in a nonselective ion channel.
Iucrj, 8, 2021
5KSC
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BU of 5ksc by Molmil
E166A/R274N/R276N Toho-1 Beta-lactamase aztreonam acyl-enzyme intermediate
分子名称: 2-({[(1Z)-1-(2-amino-1,3-thiazol-4-yl)-2-oxo-2-{[(2S,3S)-1-oxo-3-(sulfoamino)butan-2-yl]amino}ethylidene]amino}oxy)-2-methylpropanoic acid, Beta-lactamase Toho-1
著者Vandavasi, V.G, Langan, P.S, Weiss, K, Parks, J.M, Cooper, J.B, Ginell, S.L, Coates, L.
登録日2016-07-08
公開日2016-11-09
最終更新日2019-12-04
実験手法NEUTRON DIFFRACTION (2.1 Å)
主引用文献Active-Site Protonation States in an Acyl-Enzyme Intermediate of a Class A beta-Lactamase with a Monobactam Substrate.
Antimicrob. Agents Chemother., 61, 2017
5A93
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BU of 5a93 by Molmil
293K Joint X-ray Neutron with Cefotaxime: EXPLORING THE MECHANISM OF BETA-LACTAM RING PROTONATION IN THE CLASS A BETA-LACTAMASE ACYLATION MECHANISM USING NEUTRON AND X-RAY CRYSTALLOGRAPHY
分子名称: BETA-LACTAMASE CTX-M-97, CEFOTAXIME, C3' cleaved, ...
著者Vandavasi, V.G, Weiss, K.L, Cooper, J.B, Erskine, P.T, Tomanicek, S.J, Ostermann, A, Schrader, T.E, Ginell, S.L, Coates, L.
登録日2015-07-17
公開日2015-12-16
最終更新日2024-01-10
実験手法NEUTRON DIFFRACTION (1.598 Å), X-RAY DIFFRACTION
主引用文献Exploring the Mechanism of Beta-Lactam Ring Protonation in the Class a Beta-Lactamase Acylation Mechanism Using Neutron and X-Ray Crystallography.
J.Med.Chem., 59, 2016
5A91
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15K X-ray ligand free: Exploring the Mechanism of beta-Lactam Ring Protonation in the Class A beta-lactamase Acylation Mechanism Using Neutron and X-ray Crystallography
分子名称: Beta-lactamase Toho-1, SULFATE ION
著者Vandavasi, V.G, Weiss, K.L, Cooper, J.B, Erskine, P.T, Tomanicek, S.J, Ostermann, A, Schrader, T.E, Ginell, S.L, Coates, L.
登録日2015-07-17
公開日2015-12-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Exploring the Mechanism of Beta-Lactam Ring Protonation in the Class a Beta-Lactamase Acylation Mechanism Using Neutron and X-Ray Crystallography.
J.Med.Chem., 59, 2016
5A92
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BU of 5a92 by Molmil
15K X-ray structure with Cefotaxime: Exploring the Mechanism of beta- Lactam Ring Protonation in the Class A beta-lactamase Acylation Mechanism Using Neutron and X-ray Crystallography
分子名称: BETA-LACTAMASE CTX-M-97, CEFOTAXIME, C3' cleaved, ...
著者Vandavasi, V.G, Weiss, K.L, Cooper, J.B, Erskine, P.T, Tomanicek, S.J, Ostermann, A, Schrader, T.E, Ginell, S.L, Coates, L.
登録日2015-07-17
公開日2015-12-16
最終更新日2018-10-03
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Exploring the Mechanism of Beta-Lactam Ring Protonation in the Class a Beta-Lactamase Acylation Mechanism Using Neutron and X-Ray Crystallography.
J.Med.Chem., 59, 2016
5A90
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100K Neutron Ligand Free: Exploring the Mechanism of beta-Lactam Ring Protonation in the Class A beta-lactamase Acylation Mechanism Using Neutron and X-ray Crystallography
分子名称: BETA-LACTAMASE CTX-M-97
著者Vandavasi, V.G, Weiss, K.L, Cooper, J.B, Erskine, P.T, Tomanicek, S.J, Ostermann, A, Schrader, T.E, Ginell, S.L, Coates, L.
登録日2015-07-17
公開日2015-12-16
最終更新日2024-05-08
実験手法NEUTRON DIFFRACTION (1.7 Å)
主引用文献Exploring the Mechanism of Beta-Lactam Ring Protonation in the Class a Beta-Lactamase Acylation Mechanism Using Neutron and X-Ray Crystallography.
J.Med.Chem., 59, 2016
1KOA
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BU of 1koa by Molmil
TWITCHIN KINASE FRAGMENT (C.ELEGANS), AUTOREGULATED PROTEIN KINASE AND IMMUNOGLOBULIN DOMAINS
分子名称: TWITCHIN
著者Kobe, B, Heierhorst, J, Feil, S.C, Parker, M.W, Benian, G.M, Weiss, K.R, Kemp, B.E.
登録日1996-06-28
公開日1997-03-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Giant protein kinases: domain interactions and structural basis of autoregulation.
EMBO J., 15, 1996
1KOB
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BU of 1kob by Molmil
TWITCHIN KINASE FRAGMENT (APLYSIA), AUTOREGULATED PROTEIN KINASE DOMAIN
分子名称: TWITCHIN, VALINE
著者Kobe, B, Heierhorst, J, Feil, S.C, Parker, M.W, Benian, G.M, Weiss, K.R, Kemp, B.E.
登録日1996-06-28
公開日1997-03-12
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Giant protein kinases: domain interactions and structural basis of autoregulation.
EMBO J., 15, 1996
6C7A
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BU of 6c7a by Molmil
Conformational Changes in a Class A Beta lactamase that Prime it for Catalysis
分子名称: Beta-lactamase Toho-1, SULFATE ION
著者Coates, L, Langan, P.S, Vandavasi, V.G, Cooper, S.J, Weiss, K.L, Ginell, S.L, Parks, J.M.
登録日2018-01-22
公開日2018-03-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Substrate Binding Induces Conformational Changes in a Class A Beta-lactamase That Prime It for Catalysis
Acs Catalysis, 8, 2018
3RZ6
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BU of 3rz6 by Molmil
Neutron structure of perdeuterated rubredoxin using 40 hours 1st pass data
分子名称: FE (III) ION, Rubredoxin
著者Munshi, P, Chung, C.-L, Weiss, K.L, Blakeley, M.P, Myles, D.A.A, Meilleur, F.
登録日2011-05-11
公開日2011-12-28
最終更新日2023-09-13
実験手法NEUTRON DIFFRACTION (1.75 Å)
主引用文献Rapid visualization of hydrogen positions in protein neutron crystallographic structures.
Acta Crystallogr.,Sect.D, 68, 2012
3RZT
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BU of 3rzt by Molmil
Neutron structure of perdeuterated rubredoxin using rapid (14 hours) data
分子名称: FE (III) ION, Rubredoxin
著者Munshi, P, Chung, C.-L, Weiss, K.L, Blakeley, M.P, Myles, D.A.A, Meilleur, F.
登録日2011-05-12
公開日2011-12-28
最終更新日2023-09-13
実験手法NEUTRON DIFFRACTION (1.7504 Å)
主引用文献Rapid visualization of hydrogen positions in protein neutron crystallographic structures.
Acta Crystallogr.,Sect.D, 68, 2012
2XQZ
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BU of 2xqz by Molmil
Neutron structure of the perdeuterated Toho-1 R274N R276N double mutant beta-lactamase
分子名称: BETA-LACTAMSE TOHO-1
著者Tomanicek, S.J, Wang, K.K, Weiss, K.L, Blakeley, M.P, Cooper, J, Chen, Y, Coates, L.
登録日2010-09-08
公開日2010-12-22
最終更新日2024-05-08
実験手法NEUTRON DIFFRACTION (2.1 Å)
主引用文献The Active Site Protonation States of Perdeuterated Toho-1 Beta-Lactamase Determined by Neutron Diffraction Support a Role for Glu166 as the General Base in Acylation.
FEBS Lett., 585, 2011
2XR0
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BU of 2xr0 by Molmil
Room temperature X-ray structure of the perdeuterated Toho-1 R274N R276N double mutant beta-lactamase
分子名称: SULFATE ION, TOHO-1 BETA-LACTAMASE
著者Tomanicek, S.J, Wang, K.K, Weiss, K.L, Blakeley, M.P, Cooper, J, Chen, Y, Coates, L.
登録日2010-09-08
公開日2010-12-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Active Site Protonation States of Perdeuterated Toho-1 Beta-Lactamase Determined by Neutron Diffraction Support a Role for Glu166 as the General Base in Acylation.
FEBS Lett., 585, 2011
3SS2
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BU of 3ss2 by Molmil
Neutron structure of perdeuterated rubredoxin using 48 hours 3rd pass data
分子名称: FE (III) ION, Rubredoxin
著者Munshi, P, Chung, C.-L, Blakeley, M.P, Weiss, K.L, Myles, D.A.A, Meilleur, F.
登録日2011-07-07
公開日2011-12-28
最終更新日2023-09-13
実験手法NEUTRON DIFFRACTION (1.75 Å)
主引用文献Rapid visualization of hydrogen positions in protein neutron crystallographic structures.
Acta Crystallogr.,Sect.D, 68, 2012
3RYG
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BU of 3ryg by Molmil
128 hours neutron structure of perdeuterated rubredoxin
分子名称: FE (III) ION, Rubredoxin
著者Munshi, P, Chung, C.-L, Weiss, K.L, Blakeley, M.P, Myles, D.A.A, Meilleur, F.
登録日2011-05-11
公開日2011-12-28
最終更新日2023-09-13
実験手法NEUTRON DIFFRACTION (1.75 Å)
主引用文献Rapid visualization of hydrogen positions in protein neutron crystallographic structures.
Acta Crystallogr.,Sect.D, 68, 2012
5G18
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BU of 5g18 by Molmil
Direct Observation of Active-site Protonation States in a Class A beta lactamase with a monobactam substrate
分子名称: 2-({[(1Z)-1-(2-amino-1,3-thiazol-4-yl)-2-oxo-2-{[(2S,3S)-1-oxo-3-(sulfoamino)butan-2-yl]amino}ethylidene]amino}oxy)-2-methylpropanoic acid, BETA-LACTAMASE CTX-M-97, SULFATE ION
著者Vandavasi, V.G, Weiss, K.L, Parks, J.M, Cooper, J.B, Ginell, S.L, Coates, L.
登録日2016-03-23
公開日2016-11-09
最終更新日2019-10-23
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Active-Site Protonation States in an Acyl-Enzyme Intermediate of a Class A beta-Lactamase with a Monobactam Substrate.
Antimicrob. Agents Chemother., 61, 2017
6C78
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BU of 6c78 by Molmil
Substrate Binding Induces Conformational Changes In A Class A Beta Lactamase That Primes It For Catalysis
分子名称: Beta-lactamase Toho-1
著者Langan, P.S, Vandavasi, V.G, Cooper, S.J, Weiss, K.L, Ginell, S.L, Parks, J.M, Coates, L.
登録日2018-01-22
公開日2018-03-21
最終更新日2024-03-13
実験手法NEUTRON DIFFRACTION (1.75 Å)
主引用文献Substrate Binding Induces Conformational Changes in a Class A Beta-lactamase That Prime It for Catalysis
Acs Catalysis, 8, 2018
6C79
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Conformational Changes in a Class A Beta lactamase that Prime it for Catalysis
分子名称: (6R,7R)-3-(acetyloxymethyl)-7-[[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-methoxyimino-ethanoyl]amino]-8-oxo-5-thia-1-azabicy clo[4.2.0]oct-2-ene-2-carboxylic acid, Beta-lactamase Toho-1, SULFATE ION
著者Coates, L, Langan, P.S, Vandavasi, V.G, Cooper, S.J, Weiss, K.L, Ginell, S.L, Parks, J.M.
登録日2018-01-22
公開日2018-03-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Substrate Binding Induces Conformational Changes in a Class A Beta-lactamase That Prime It for Catalysis
Acs Catalysis, 8, 2018
4C3Q
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BU of 4c3q by Molmil
Neutron structure of a perdeuterated Toho-1 R274N R276N double mutant Beta-lactamase in complex with a fully deuterated boronic acid (BZB) at 100K
分子名称: BENZO[B]THIOPHENE-2-BORONIC ACID, BETA-LACTAMASE TOHO-1
著者Coates, L, Tomanicek, S.J, Schrader, T, Weiss, K.L, Ng, J.D, Ostermann, A.
登録日2013-08-26
公開日2014-07-09
最終更新日2017-03-22
実験手法NEUTRON DIFFRACTION (2.2 Å)
主引用文献Cryogenic Neutron Protein Crystallography: Routine Methods and Potential Benefits
J.Appl.Crystallogr., 47, 2014
5KMW
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BU of 5kmw by Molmil
TOHO1 Beta lactamase mutant E166A/R274N/R276N -benzyl penicillin complex
分子名称: Beta-lactamase Toho-1, OPEN FORM - PENICILLIN G, PENICILLIN G, ...
著者Coates, L, Langan, P.S, Vandavasi, V.G, Weiss, K.L, Cooper, J.B, Ginell, S.L.
登録日2016-06-27
公開日2017-03-01
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献TOHO1 Beta lactamase mutant E166A/R274N/R276N -benzyl penicillin complex
to be published
6U58
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BU of 6u58 by Molmil
Toho1 Beta Lactamase Glu166Gln Mutant
分子名称: Beta-lactamase, SULFATE ION
著者Langan, P.S, Sullivan, B, Weiss, K.L.
登録日2019-08-27
公開日2020-02-19
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION
主引用文献Probing the Role of the Conserved Residue Glu166 in a Class A Beta-Lactamase Using Neutron and X-ray Protein Crystallography
Acta Crystallogr.,Sect.D, 76, 2020
4BD0
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BU of 4bd0 by Molmil
X-ray structure of a perdeuterated Toho-1 R274N R276N double mutant Beta-lactamase in complex with a fully deuterated boronic acid (BZB)
分子名称: BENZO[B]THIOPHENE-2-BORONIC ACID, BETA-LACTAMASE TOHO-1, SULFATE ION
著者Tomanicek, S.J, Weiss, K.L, Standaert, R.F, Ostermann, A, Schrader, T.E, Ng, J.D, Coates, L.
登録日2012-10-04
公開日2013-01-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.207 Å)
主引用文献Neutron and X-Ray Crystal Structures of a Perdeuterated Enzyme Inhibitor Complex Reveal the Catalytic Proton Network of the Toho-1 Beta-Lactamase for the Acylation Reaction.
J.Biol.Chem., 288, 2013

 

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