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PDB: 659 件

4QX2
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Cry3A Toxin structure obtained by injecting Bacillus thuringiensis cells in an XFEL beam, collecting data by serial femtosecond crystallographic methods and processing data with the cctbx.xfel software suite
分子名称: Pesticidal crystal protein cry3Aa
著者Sawaya, M.R, Cascio, D, Gingery, M, Rodriguez, J, Goldschmidt, L, Colletier, J.-P, Messerschmidt, M, Boutet, S, Koglin, J.E, Williams, G.J, Brewster, A.S, Nass, K, Hattne, J, Botha, S, Doak, R.B, Shoeman, R.L, DePonte, D.P, Park, H.-W, Federici, B.A, Sauter, N.K, Schlichting, I, Eisenberg, D.
登録日2014-07-17
公開日2014-08-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Protein crystal structure obtained at 2.9 angstrom resolution from injecting bacterial cells into an X-ray free-electron laser beam.
Proc.Natl.Acad.Sci.USA, 111, 2014
4QX1
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Cry3A Toxin structure obtained by Serial Femtosecond Crystallography from in vivo grown crystals isolated from Bacillus thuringiensis and data processed with the CrystFEL software suite
分子名称: Pesticidal crystal protein cry3Aa
著者Sawaya, M.R, Cascio, D, Gingery, M, Rodriguez, J, Goldschmidt, L, Colletier, J.-P, Messerschmidt, M, Boutet, S, Koglin, J.E, Williams, G.J, Brewster, A.S, Nass, K, Hattne, J, Botha, S, Doak, R.B, Shoeman, R.L, DePonte, D.P, Park, H.-W, Federici, B.A, Sauter, N.K, Schlichting, I, Eisenberg, D.
登録日2014-07-17
公開日2014-08-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Protein crystal structure obtained at 2.9 angstrom resolution from injecting bacterial cells into an X-ray free-electron laser beam.
Proc.Natl.Acad.Sci.USA, 111, 2014
7ROJ
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Amyloid-related segment of alphaB-crystallin residues 90-100 with G95W mutation
分子名称: Alpha-crystallin B chain peptide, GLYCEROL, SODIUM ION, ...
著者Sawaya, M.R, Do, T.D, Eisenberg, D.S.
登録日2021-07-30
公開日2022-01-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic view of an amyloid dodecamer exhibiting selective cellular toxic vulnerability in acute brain slices.
Protein Sci., 31, 2022
7ROL
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Amyloid-related segment of alphaB-crystallin residues 90-100 with G95W mutation, bromo derivative
分子名称: Alpha-crystallin B chain peptide
著者Sawaya, M.R, Do, T.D, Eisenberg, D.S.
登録日2021-07-30
公開日2022-02-16
最終更新日2022-03-02
実験手法X-RAY DIFFRACTION (1.996 Å)
主引用文献Atomic view of an amyloid dodecamer exhibiting selective cellular toxic vulnerability in acute brain slices.
Protein Sci., 31, 2022
5HA7
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Human Aldose Reductase in Complex with NADP+ and WY14643 in Space Group P212121
分子名称: 2-({4-CHLORO-6-[(2,3-DIMETHYLPHENYL)AMINO]PYRIMIDIN-2-YL}SULFANYL)ACETIC ACID, Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Sawaya, M.R, Cascio, D, Balendiran, G.K.
登録日2015-12-30
公開日2016-09-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Characterization of WY 14,643 and its Complex with Aldose Reductase.
Sci Rep, 6, 2016
5HW9
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Filamentous Assembly of Green Fluorescent Protein Supported by a C-terminal fusion of 18-residues, viewed in space group P21
分子名称: Green fluorescent protein
著者Sawaya, M.R, Heller, D.M, McPartland, L, Hochschild, A, Eisenberg, D.S.
登録日2016-01-29
公開日2017-02-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Green Fluorescent Protein Fusion that Self Assembles as Polar Filaments
to be published
5HBD
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Filamentous Assembly of Green Fluorescent Protein Supported by a C-terminal fusion of 18-residues, viewed in space group C2
分子名称: Green fluorescent protein
著者Sawaya, M.R, Hochschild, A, Heller, D.M, McPartland, L, Eisenberg, D.S.
登録日2015-12-31
公開日2017-01-04
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Green Fluorescent Protein Fusion that Self Assembles as Polar Filaments
to be published
5HGE
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Filamentous Assembly of Green Fluorescent Protein Supported by a C-terminal fusion of 18-residues, viewed in space group P212121
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Green fluorescent protein
著者Sawaya, M.R, Heller, D.M, McPartland, L, Hochschild, A, Eisenberg, D.S.
登録日2016-01-08
公開日2017-01-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.863 Å)
主引用文献Green Fluorescent Protein Fusion that Self Assembles as Polar Filaments
to be published
4ZAR
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Crystal Structure of Proteinase K from Engyodontium albuminhibited by METHOXYSUCCINYL-ALA-ALA-PRO-PHE-CHLOROMETHYL KETONE at 1.15 A resolution
分子名称: CALCIUM ION, METHOXYSUCCINYL-ALA-ALA-PRO-PHE-CHLOROMETHYL KETONE, bound form, ...
著者Sawaya, M.R, Cascio, D, Collazo, M, Bond, C, Cohen, A, DeNicola, A, Eden, K, Jain, K, Leung, C, Lubock, N, McCormick, J, Rosinski, J, Spiegelman, L, Athar, Y, Tibrewal, N, Winter, J, Solomon, S.
登録日2015-04-14
公開日2015-05-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystal Structure of Proteinase K from Engyodontium album inhibited by METHOXYSUCCINYL-ALA-ALA-PRO-PHE-CHLOROMETHYL KETONE at 1.15 A resolution
to be published
8T86
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Racemic mixture of amylin segment 25-AILSS-29 forms heterochiral rippled beta-sheet
分子名称: Racemic mixture of amylin segment 25-AILSS-29
著者Sawaya, M.R, Raskatov, J.A, Hazari, A, Sajimon, M.
登録日2023-06-21
公開日2023-11-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.102 Å)
主引用文献Racemic Peptides from Amyloid beta and Amylin Form Rippled beta-Sheets Rather Than Pleated beta-Sheets.
J.Am.Chem.Soc., 145, 2023
8T84
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Racemic mixture of amyloid beta segment 35-MVGGVV-40 forms heterochiral rippled beta-sheet, includes hexafluoroisopropanol
分子名称: 1,1,1,3,3,3-hexafluoropropan-2-ol, Racemic mixture of amyloid beta segment 35-MVGGVV-40
著者Sawaya, M.R, Raskatov, J.A, Hazari, A.
登録日2023-06-21
公開日2023-11-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.101 Å)
主引用文献Racemic Peptides from Amyloid beta and Amylin Form Rippled beta-Sheets Rather Than Pleated beta-Sheets.
J.Am.Chem.Soc., 145, 2023
8T82
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Racemic mixture of amyloid beta segment 35-MVGGVV-40 forms heterochiral rippled beta-sheet, includes pentafluoropropionic acid
分子名称: amyloid beta segment 35-MVGGVV-40, racemic mixture, pentafluoropropanoic acid
著者Sawaya, M.R, Raskatov, J.A, Hazari, A.
登録日2023-06-21
公開日2023-11-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Racemic Peptides from Amyloid beta and Amylin Form Rippled beta-Sheets Rather Than Pleated beta-Sheets.
J.Am.Chem.Soc., 145, 2023
8T89
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Racemic mixture of amyloid beta segment 16-KLVFFA-21 forms heterochiral rippled beta-sheet
分子名称: Racemic mixture of amyloid beta segment 16-KLVFFA-21, trifluoroacetic acid
著者Sawaya, M.R, Raskatov, J.A, Hazari, A.
登録日2023-06-22
公開日2023-11-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Racemic Peptides from Amyloid beta and Amylin Form Rippled beta-Sheets Rather Than Pleated beta-Sheets.
J.Am.Chem.Soc., 145, 2023
6AS9
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Filamentous Assembly of Green Fluorescent Protein Supported by a C-terminal fusion of 18-residues, viewed in space group P212121 form 2
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Green fluorescent protein
著者Sawaya, M.R, Heller, D.M, McPartland, L, Hochschild, A, Eisenberg, D.S.
登録日2017-08-23
公開日2018-05-30
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Atomic insights into the genesis of cellular filaments by globular proteins.
Nat. Struct. Mol. Biol., 25, 2018
4DDF
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Computationally Designed Self-assembling Octahedral Cage protein, O333, Crystallized in space group P4
分子名称: CHLORIDE ION, Propanediol utilization polyhedral body protein PduT, SULFATE ION
著者Sawaya, M.R, King, N.P, Sheffler, W, Baker, D, Yeates, T.O.
登録日2012-01-18
公開日2012-06-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Computational design of self-assembling protein nanomaterials with atomic level accuracy.
Science, 336, 2012
2ONX
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NNQQ peptide corresponding to residues 8-11 of yeast prion sup35 (alternate crystal form)
分子名称: peptide corresponding to residues 8-11 of yeast prion sup35
著者Sawaya, M.R, Sambashivan, S, Nelson, R, Ivanova, M, Sievers, S.A, Apostol, M.I, Thompson, M.J, Balbirnie, M, Wiltzius, J.J, McFarlane, H, Madsen, A.O, Riekel, C, Eisenberg, D.
登録日2007-01-24
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2OKZ
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MVGGVV peptide derived from Alzheimer's A-beta
分子名称: peptide from Alzheimer's A-beta
著者Sawaya, M.R, Sambashivan, S, Eisenberg, D.
登録日2007-01-18
公開日2007-01-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
6NB9
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Amyloid-Beta (20-34) with L-isoaspartate 23
分子名称: Amyloid-beta A4 protein
著者Sawaya, M.R, Warmack, R.A, Boyer, D.R, Zee, C.T, Richards, L.S, Cascio, D, Gonen, T, Clarke, S.G, Eisenberg, D.S.
登録日2018-12-06
公開日2019-08-07
最終更新日2022-09-07
実験手法ELECTRON CRYSTALLOGRAPHY (1.05 Å)
主引用文献Structure of amyloid-beta (20-34) with Alzheimer's-associated isomerization at Asp23 reveals a distinct protofilament interface.
Nat Commun, 10, 2019
6OIZ
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Amyloid-Beta (20-34) wild type
分子名称: Amyloid beta A4 protein
著者Sawaya, M.R, Warmack, R.A, Zee, C.T, Gonen, T, Clarke, S.G, Eisenberg, D.S.
登録日2019-04-10
公開日2019-08-07
最終更新日2024-05-15
実験手法ELECTRON CRYSTALLOGRAPHY (1.1 Å)
主引用文献Structure of amyloid-beta (20-34) with Alzheimer's-associated isomerization at Asp23 reveals a distinct protofilament interface.
Nat Commun, 10, 2019
3CJH
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BU of 3cjh by Molmil
Tim8-Tim13 complex
分子名称: Mitochondrial import inner membrane translocase subunit TIM13, Mitochondrial import inner membrane translocase subunit TIM8
著者Sawaya, M.R, Schmid, E, Beverly, K.N, Koehler, C.M.
登録日2008-03-12
公開日2008-03-25
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Tim8-Tim13 complex has multiple substrate binding sites and binds cooperatively to Tim23
J.Mol.Biol., 382, 2008
4J8R
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Structure of an octapeptide repeat of the prion protein bound to the POM2 Fab antibody fragment
分子名称: Heavy chain of POM2 Fab, Light chain of POM2 Fab, Major prion protein
著者Swayampakula, M, Baral, P.K, Kav, N.N.V, Aguzzi, A, James, M.N.G.
登録日2013-02-14
公開日2013-05-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献The crystal structure of an octapeptide repeat of the Prion protein in complex with a Fab fragment of the POM2 antibody.
Protein Sci., 22, 2013
2OMM
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GNNQQNY peptide corresponding to residues 7-13 of yeast prion sup35
分子名称: GNNQQNY peptide corresponding to residues 7-13 of yeast prion sup35
著者Sawaya, M.R, Nelson, R, Eisenberg, D.
登録日2007-01-22
公開日2007-01-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
3DMK
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Crystal structure of Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, N-terminal eight Ig domains
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, ...
著者Sawaya, M.R, Wojtowicz, W.M, Eisenberg, D, Zipursky, S.L.
登録日2008-07-01
公開日2008-10-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (4.19 Å)
主引用文献A double S shape provides the structural basis for the extraordinary binding specificity of Dscam isoforms.
Cell(Cambridge,Mass.), 134, 2008
3CJC
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Actin dimer cross-linked by V. cholerae MARTX toxin and complexed with DNase I and Gelsolin-segment 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Sawaya, M.R, Kudryashov, D.S, Pashkov, I, Reisler, E, Yeates, T.O.
登録日2008-03-12
公開日2008-03-25
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Connecting actin monomers by iso-peptide bond is a toxicity mechanism of the Vibrio cholerae MARTX toxin.
Proc.Natl.Acad.Sci.USA, 105, 2008
8DDG
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FYF peptide forms a standard beta-sheet
分子名称: PHE-TYR-PHE
著者Sawaya, M.R, Hazari, A, Eisenberg, D.E, Vlahakis, N.W.
登録日2022-06-18
公開日2022-09-28
最終更新日2024-05-22
実験手法ELECTRON CRYSTALLOGRAPHY (0.9 Å)
主引用文献The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey.
Chem Sci, 13, 2022

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