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PDB: 947 results

3K61
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BU of 3k61 by Molmil
Crystal structure of FBF-2/fog-1 FBEa complex
Descriptor: 5'-R(*UP*GP*UP*AP*AP*AP*AP*UP*C)-3', Fem-3 mRNA-binding factor 2
Authors:Wang, Y, Opperman, L, Wickens, M, Hall, T.M.T.
Deposit date:2009-10-08
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural basis for specific recognition of multiple mRNA targets by a PUF regulatory protein.
Proc.Natl.Acad.Sci.USA, 106, 2009
3K5Y
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BU of 3k5y by Molmil
Crystal structure of FBF-2/gld-1 FBEa complex
Descriptor: 5'-R(*UP*GP*UP*GP*CP*CP*AP*UP*A)-3', Fem-3 mRNA-binding factor 2
Authors:Wang, Y, Opperman, L, Wickens, M, Hall, T.M.T.
Deposit date:2009-10-08
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for specific recognition of multiple mRNA targets by a PUF regulatory protein.
Proc.Natl.Acad.Sci.USA, 106, 2009
3HJF
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BU of 3hjf by Molmil
Crystal structure of T. thermophilus Argonaute E546 mutant protein complexed with DNA guide strand and 15-nt RNA target strand
Descriptor: 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3', 5'-R(*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP*G)-3', Argonaute, ...
Authors:Wang, Y, Li, H, Sheng, G, Patel, D.J.
Deposit date:2009-05-21
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.056 Å)
Cite:Nucleation, propagation and cleavage of target RNAs in Ago silencing complexes.
Nature, 461, 2009
3HK2
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BU of 3hk2 by Molmil
Crystal structure of T. thermophilus Argonaute N478 mutant protein complexed with DNA guide strand and 19-nt RNA target strand
Descriptor: 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3', 5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP*G)-3', Argonaute, ...
Authors:Wang, Y, Li, H, Sheng, G, Patel, D.J.
Deposit date:2009-05-22
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Nucleation, propagation and cleavage of target RNAs in Ago silencing complexes.
Nature, 461, 2009
3K62
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BU of 3k62 by Molmil
Crystal structure of FBF-2/gld-1 FBEb complex
Descriptor: 5'-R(*UP*GP*UP*GP*UP*UP*AP*UP*C)-3', Fem-3 mRNA-binding factor 2
Authors:Wang, Y, Opperman, L, Wickens, M, Hall, T.M.T.
Deposit date:2009-10-08
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for specific recognition of multiple mRNA targets by a PUF regulatory protein.
Proc.Natl.Acad.Sci.USA, 106, 2009
3HVR
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BU of 3hvr by Molmil
Crystal structure of T. thermophilus Argonaute complexed with DNA guide strand and 19-nt RNA target strand with two Mg2+ at the cleavage site
Descriptor: 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*TP*GP*AP*TP*AP*GP*T)-3', 5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP*G)-3', Argonaute, ...
Authors:Wang, Y, Li, H, Sheng, G, Patel, D.J.
Deposit date:2009-06-16
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.211 Å)
Cite:Nucleation, propagation and cleavage of target RNAs in Ago silencing complexes.
Nature, 461, 2009
3HM9
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BU of 3hm9 by Molmil
Crystal structure of T. thermophilus Argonaute complexed with DNA guide strand and 19-nt RNA target strand
Descriptor: 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3', 5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP*G)-3', Argonaute, ...
Authors:Wang, Y, Li, H, Sheng, G, Patel, D.J.
Deposit date:2009-05-28
Release date:2009-10-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Nucleation, propagation and cleavage of target RNAs in Ago silencing complexes.
Nature, 461, 2009
6AK4
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BU of 6ak4 by Molmil
Crystal structure of human FTO in complex with small-molecule inhibitors
Descriptor: (~{E})-2-cyano-~{N},~{N}-diethyl-3-[3-nitro-4,5-bis(oxidanyl)phenyl]prop-2-enamide, Alpha-ketoglutarate-dependent dioxygenase FTO,Alpha-ketoglutarate-dependent dioxygenase FTO, ZINC ION
Authors:Wang, Y, Cao, R, Peng, S, Zhang, W, Huang, N.
Deposit date:2018-08-30
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Identification of entacapone as a chemical inhibitor of FTO mediating metabolic regulation through FOXO1.
Sci Transl Med, 11, 2019
3K5Q
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BU of 3k5q by Molmil
Crystal structure of FBF-2/FBE complex
Descriptor: 5'-R(P*UP*GP*UP*AP*CP*UP*AP*UP*A)-3', Fem-3 mRNA-binding factor 2
Authors:Wang, Y, Opperman, L, Wickens, M, Hall, T.M.T.
Deposit date:2009-10-07
Release date:2009-11-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for specific recognition of multiple mRNA targets by a PUF regulatory protein.
Proc.Natl.Acad.Sci.USA, 106, 2009
3K5Z
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BU of 3k5z by Molmil
Crystal structure of FBF-2/gld-1 FBEa G4A mutant complex
Descriptor: 5'-R(*UP*GP*UP*AP*CP*CP*AP*UP*A)-3', Fem-3 mRNA-binding factor 2
Authors:Wang, Y, Opperman, L, Wickens, M, Hall, T.M.T.
Deposit date:2009-10-08
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for specific recognition of multiple mRNA targets by a PUF regulatory protein.
Proc.Natl.Acad.Sci.USA, 106, 2009
8JKE
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BU of 8jke by Molmil
AfsR(T337A) transcription activation complex
Descriptor: DNA(65-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Wang, Y, Zheng, J.
Deposit date:2023-06-01
Release date:2024-02-14
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Structural and functional characterization of AfsR, an SARP family transcriptional activator of antibiotic biosynthesis in Streptomyces.
Plos Biol., 22, 2024
8K1P
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BU of 8k1p by Molmil
mycobacterial efflux pump, ADP+vanadate bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, CARDIOLIPIN, ...
Authors:Wang, Y, Wu, F, Zhang, L, Rao, Z.
Deposit date:2023-07-11
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:mycobacterial efflux pump, ADP+vanadate bound state
To Be Published
8K1O
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BU of 8k1o by Molmil
mycobacterial efflux pump, AMPPNP bound state
Descriptor: CARDIOLIPIN, MAGNESIUM ION, Multidrug efflux system ATP-binding protein Rv1218c, ...
Authors:Wang, Y, Wu, F, Zhang, L, Rao, Z.
Deposit date:2023-07-11
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:mycobacterial efflux pump, AMPPNP bound state
To Be Published
8K1N
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BU of 8k1n by Molmil
mycobacterial efflux pump, substrate-bound state
Descriptor: CARDIOLIPIN, Multidrug efflux system ATP-binding protein Rv1218c, Multidrug efflux system permease protein Rv1217c, ...
Authors:Wang, Y, Wu, F, Zhang, L, Rao, Z.
Deposit date:2023-07-11
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:mycobacterial efflux pump, substrate-bound state
To Be Published
8K1M
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BU of 8k1m by Molmil
mycobacterial efflux pump, apo state
Descriptor: (1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, CARDIOLIPIN, Multidrug efflux system ATP-binding protein Rv1218c, ...
Authors:Wang, Y, Wu, F, Zhang, L, Rao, Z.
Deposit date:2023-07-11
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:mycobacterial efflux pump, apo state
To Be Published
8KAA
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BU of 8kaa by Molmil
Crystal Structure of ChaU a ester cyclase from Streptomyces chartreusis
Descriptor: ester cyclase
Authors:Wang, Y, Ma, X.
Deposit date:2023-08-02
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Crystal Structure of ChaU a ester cyclase from Streptomyces chartreusis
To Be Published
3LJQ
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BU of 3ljq by Molmil
Crystal Structure of the Glycosylasparaginase T152C apo-precursor
Descriptor: GLYCINE, N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase, SODIUM ION
Authors:Wang, Y, Guo, H.-C.
Deposit date:2010-01-26
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic snapshot of glycosylasparaginase precursor poised for autoprocessing.
J.Mol.Biol., 403, 2010
7Y3E
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BU of 7y3e by Molmil
Cryo-EM structure of Arabidopsis thaliana SOS1 in an occluded state
Descriptor: HEXADECANE, Sodium/hydrogen exchanger 7
Authors:Wang, Y, Zhao, Y, Gao, Y.
Deposit date:2022-06-10
Release date:2023-08-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Architecture and autoinhibitory mechanism of the plasma membrane Na + /H + antiporter SOS1 in Arabidopsis.
Nat Commun, 14, 2023
8KBX
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BU of 8kbx by Molmil
Cryo-EM structure of human ATG2A-WIPI4 complex
Descriptor: Autophagy-related protein 2 homolog A, WD repeat domain phosphoinositide-interacting protein 4
Authors:Wang, Y, Stjepanovic, G.
Deposit date:2023-08-04
Release date:2024-08-07
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural basis for lipid transfer by the ATG2A-ATG9A complex.
Nat.Struct.Mol.Biol., 2024
8KBY
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BU of 8kby by Molmil
Cryo-EM structure of ATG2A
Descriptor: Autophagy-related protein 2 homolog A
Authors:Wang, Y, Stjepanovic, G.
Deposit date:2023-08-04
Release date:2024-08-07
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural basis for lipid transfer by the ATG2A-ATG9A complex.
Nat.Struct.Mol.Biol., 2024
8KC3
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BU of 8kc3 by Molmil
Cryo-EM structure of human C-terminally bound ATG9A-ATG2A-WIPI4 complex
Descriptor: Autophagy-related protein 2 homolog A, Autophagy-related protein 9A, WD repeat domain phosphoinositide-interacting protein 4
Authors:Wang, Y, Stjepanovic, G.
Deposit date:2023-08-05
Release date:2024-08-07
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structural basis for lipid transfer by the ATG2A-ATG9A complex.
Nat.Struct.Mol.Biol., 2024
8HN9
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BU of 8hn9 by Molmil
Human SIRT3 Recognizing CCNE2K348la peptide
Descriptor: CCNE2 peptide, IMIDAZOLE, NAD-dependent protein deacetylase sirtuin-3, ...
Authors:Wang, Y, Ding, W.
Deposit date:2022-12-07
Release date:2023-05-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:SIRT3-dependent delactylation of cyclin E2 prevents hepatocellular carcinoma growth.
Embo Rep., 24, 2023
3TDL
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BU of 3tdl by Molmil
Structure of human serum albumin in complex with DAUDA
Descriptor: 11-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)undecanoic acid, MYRISTIC ACID, Serum albumin
Authors:Wang, Y, Luo, Z, Shi, X, Wang, H, Nie, L.
Deposit date:2011-08-11
Release date:2012-06-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A fluorescent fatty acid probe, DAUDA, selectively displaces two myristates bound in human serum albumin
Protein Sci., 20, 2011
3F73
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BU of 3f73 by Molmil
Alignment of guide-target seed duplex within an argonaute silencing complex
Descriptor: ARGONAUTE, DNA (5'-D(P*DTP*DGP*DAP*DGP*DGP*DTP*DAP*DGP*DTP*DAP*DGP*DGP*DTP*DTP*DGP*DTP*DA*DTP*DAP*DGP*DT)-3'), MAGNESIUM ION, ...
Authors:Wang, Y, Li, H, Sheng, G, Juranek, S, Tuschl, T, Patel, D.J.
Deposit date:2008-11-07
Release date:2008-12-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of an argonaute silencing complex with a seed-containing guide DNA and target RNA duplex.
Nature, 456, 2008
6KG6
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BU of 6kg6 by Molmil
Crystal structure of MavC/UBE2N-Ub complex
Descriptor: MavC, Ubiquitin-40S ribosomal protein S27a, Ubiquitin-conjugating enzyme E2 N
Authors:Wang, Y, Huang, Y, Chang, M, Feng, Y.
Deposit date:2019-07-10
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural insights into the mechanism and inhibition of transglutaminase-induced ubiquitination by the Legionella effector MavC.
Nat Commun, 11, 2020

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PDB entries from 2024-10-30

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