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PDB: 1177 results

2KHS
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BU of 2khs by Molmil
Solution structure of SNase121:SNase(111-143) complex
Descriptor: Nuclease, Thermonuclease
Authors:Geng, Y, Feng, Y, Xie, T, Shan, L, Wang, J.
Deposit date:2009-04-10
Release date:2009-10-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The native-like interactions between SNase121 and SNase(111-143) fragments induce the recovery of their native-like structures and the ability to degrade DNA.
Biochemistry, 48, 2009
2LA9
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BU of 2la9 by Molmil
NMR structure of Pseudouridine_ASL_Tyr
Descriptor: RNA (5'-R(*GP*GP*GP*GP*AP*CP*UP*GP*UP*AP*AP*AP*(PSU)P*CP*CP*CP*C)-3')
Authors:Denmon, A.P, Wang, J, Nikonowicz, E.P.
Deposit date:2011-03-09
Release date:2011-08-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Conformation Effects of Base Modification on the Anticodon Stem-Loop of Bacillus subtilis tRNA(Tyr).
J.Mol.Biol., 412, 2011
2HR9
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BU of 2hr9 by Molmil
Solution structure of human translationally controlled tumor protein
Descriptor: Translationally-controlled tumor protein
Authors:Feng, Y, Liu, D, Yao, H, Wang, J.
Deposit date:2006-07-20
Release date:2006-08-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure and mapping of a very weak calcium-binding site of human translationally controlled tumor protein by NMR
Arch.Biochem.Biophys., 48, 2007
2LEO
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BU of 2leo by Molmil
Solution structure of esophageal cancer-related gene 2
Descriptor: Serine protease inhibitor Kazal-type 7
Authors:Feng, Y, Geng, Y, Wang, J.
Deposit date:2011-06-20
Release date:2012-05-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structure note: human esophageal cancer-related gene 2
J.Biomol.Nmr, 53, 2012
2LAC
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BU of 2lac by Molmil
NMR structure of unmodified_ASL_Tyr
Descriptor: RNA (5'-R(*GP*GP*GP*GP*AP*CP*UP*GP*UP*AP*AP*AP*UP*CP*CP*CP*C)-3')
Authors:Denmon, A.P, Wang, J, Nikonowicz, E.P.
Deposit date:2011-03-10
Release date:2011-08-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Conformation Effects of Base Modification on the Anticodon Stem-Loop of Bacillus subtilis tRNA(Tyr).
J.Mol.Biol., 412, 2011
5O69
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BU of 5o69 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with agmatine.
Descriptor: AGMATINE, MAGNESIUM ION, RNA (37-MER), ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-06-06
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.319 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NEP
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BU of 5nep by Molmil
The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with methylguanidine
Descriptor: 1-METHYLGUANIDINE, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-03-11
Release date:2017-05-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
5NEQ
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BU of 5neq by Molmil
The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with aminoguanidine
Descriptor: AMINOGUANIDINE, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-03-11
Release date:2017-05-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
5NEO
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BU of 5neo by Molmil
The structure of the G. violaceus guanidine II riboswitch P1 stem-loop
Descriptor: AMMONIUM ION, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-03-11
Release date:2017-05-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
5NZ3
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BU of 5nz3 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with methylguanidine
Descriptor: 1-METHYLGUANIDINE, MAGNESIUM ION, RNA (41-MER), ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-05-12
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.059 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NY8
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BU of 5ny8 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with aminoguanidine
Descriptor: AMINOGUANIDINE, MAGNESIUM ION, RNA (41-MER), ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-05-11
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NZ6
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BU of 5nz6 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with guanidine in space group P3212.
Descriptor: GUANIDINE, RNA (41-MER)
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-05-12
Release date:2017-10-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NWQ
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BU of 5nwq by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with guanidine.
Descriptor: GUANIDINE, Guanidine III riboswitch, MAGNESIUM ION, ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-05-08
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NZD
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BU of 5nzd by Molmil
The structure of the thermobifida fusca guanidine III riboswitch in space group P212121.
Descriptor: ACETATE ION, MAGNESIUM ION, SODIUM ION, ...
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-05-13
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.007 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5O62
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BU of 5o62 by Molmil
The structure of the thermobifida fusca guanidine III riboswitch with 1-Ethylguanidine.
Descriptor: MAGNESIUM ION, N-ETHYLGUANIDINE, RNA (41-MER)
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-06-04
Release date:2017-10-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.119 Å)
Cite:Structure of the Guanidine III Riboswitch.
Cell Chem Biol, 24, 2017
5NEX
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BU of 5nex by Molmil
The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with agmatine
Descriptor: AGMATINE, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION
Authors:Huang, L, Wang, J, Lilley, D.M.J.
Deposit date:2017-03-13
Release date:2017-05-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The Structure of the Guanidine-II Riboswitch.
Cell Chem Biol, 24, 2017
7EQH
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BU of 7eqh by Molmil
Crystal structure of Arabidopsis GUN2/HO1 in complex with heme
Descriptor: Heme oxygenase 1, chloroplastic, PROTOPORPHYRIN IX CONTAINING FE
Authors:Li, X, Wang, J, Liu, L.
Deposit date:2021-05-02
Release date:2022-05-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Enzymological and structural characterization of Arabidopsis thaliana heme oxygenase-1.
Febs Open Bio, 12, 2022
7F6W
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BU of 7f6w by Molmil
Crystal structure of Saccharomyces cerevisiae lysyl-tRNA Synthetase
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 5'-O-[(L-LYSYLAMINO)SULFONYL]ADENOSINE, Lysine--tRNA ligase
Authors:Wu, S, Li, P, Hei, Z, Zheng, L, Wang, J, Fang, P.
Deposit date:2021-06-26
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.607 Å)
Cite:Human lysyl-tRNA synthetase evolves a dynamic structure that can be stabilized by forming complex.
Cell.Mol.Life Sci., 79, 2022
5Y3R
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BU of 5y3r by Molmil
Cryo-EM structure of Human DNA-PK Holoenzyme
Descriptor: DNA (34-MER), DNA (36-MER), DNA-dependent protein kinase catalytic subunit, ...
Authors:Yin, X, Liu, M, Tian, Y, Wang, J, Xu, Y.
Deposit date:2017-07-29
Release date:2017-09-06
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Cryo-EM structure of human DNA-PK holoenzyme
Cell Res., 27, 2017
5WS3
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BU of 5ws3 by Molmil
Crystal structures of human orexin 2 receptor bound to the selective antagonist EMPA determined by serial femtosecond crystallography at SACLA
Descriptor: N-ethyl-2-[(6-methoxypyridin-3-yl)-(2-methylphenyl)sulfonyl-amino]-N-(pyridin-3-ylmethyl)ethanamide, OLEIC ACID, Orexin receptor type 2,GlgA glycogen synthase,Orexin receptor type 2, ...
Authors:Suno, R, Kimura, K, Nakane, T, Yamashita, K, Wang, J, Fujiwara, T, Yamanaka, Y, Im, D, Tsujimoto, H, Sasanuma, M, Horita, S, Hirokawa, T, Nango, E, Tono, K, Kameshima, T, Hatsui, T, Joti, Y, Yabashi, M, Shimamoto, K, Yamamoto, M, Rosenbaum, D.M, Iwata, S, Shimamura, T, Kobayashi, T.
Deposit date:2016-12-05
Release date:2017-12-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Human Orexin 2 Receptor Bound to the Subtype-Selective Antagonist EMPA.
Structure, 26, 2018
2JYJ
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BU of 2jyj by Molmil
Re-refining the tetraloop-receptor RNA-RNA complex using NMR-derived restraints and Xplor-nih (2.18)
Descriptor: RNA (43-MER)
Authors:Zuo, X, Wang, J, Foster, T.R, Schwieters, C.D, Tiede, D.M, Butcher, S.E, Wang, Y.
Deposit date:2007-12-13
Release date:2008-10-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:RNA helical packing in solution: NMR structure of a 30 kDa GAAA tetraloop-receptor complex.
J.Mol.Biol., 351, 2005
7UJ1
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BU of 7uj1 by Molmil
Crystal structure of PSF-RNA complex
Descriptor: RNA (30-MER), Splicing factor, proline- and glutamine-rich
Authors:Sachpatzidis, A, Wang, J, Konigsberg, W.H.
Deposit date:2022-03-30
Release date:2022-09-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Insight into the Tumor Suppression Mechanism from the Structure of Human Polypyrimidine Splicing Factor (PSF/SFPQ) Complexed with a 30mer RNA from Murine Virus-like 30S Transcript-1.
Biochemistry, 61, 2022
1FWS
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BU of 1fws by Molmil
AQUIFEX AEOLICUS KDO8P SYNTHASE IN COMPLEX WITH PEP AND CADMIUM
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, CADMIUM ION, PHOSPHATE ION, ...
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-24
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Electronic structure of the metal center in the Cd(2+), Zn(2+), and Cu(2+) substituted forms of KDO8P synthase: implications for catalysis.
Biochemistry, 48, 2009
1FWW
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BU of 1fww by Molmil
AQUIFEX AEOLICUS KDO8P SYNTHASE IN COMPLEX WITH PEP, A5P AND CADMIUM
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, ARABINOSE-5-PHOSPHATE, CADMIUM ION, ...
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-24
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Electronic structure of the metal center in the Cd(2+), Zn(2+), and Cu(2+) substituted forms of KDO8P synthase: implications for catalysis.
Biochemistry, 48, 2009
7C4U
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BU of 7c4u by Molmil
MicroED structure of orthorhombic Vancomycin at 1.2 A resolution
Descriptor: CHLORIDE ION, Vancomycin, vancosamine-(1-2)-beta-D-glucopyranose
Authors:Fan, Q, Zhou, H, Li, X, Wang, J.
Deposit date:2020-05-18
Release date:2020-08-12
Last modified:2021-03-17
Method:ELECTRON CRYSTALLOGRAPHY (1.2 Å)
Cite:Precise Control Over Kinetics of Molecular Assembly: Production of Particles with Tunable Sizes and Crystalline Forms.
Angew.Chem.Int.Ed.Engl., 59, 2020

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