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PDB: 1187 件

4J2B
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RB69 DNA Polymerase L415G Ternary Complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*T)-3'), ...
著者Xia, S, Wang, J, Konigsberg, W.H.
登録日2013-02-04
公開日2014-02-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Alteration in the cavity size adjacent to the active site of RB69 DNA polymerase changes its conformational dynamics.
Nucleic Acids Res., 41, 2013
4J2E
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RB69 DNA Polymerase L415M Ternary Complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*G)-3'), ...
著者Xia, S, Wang, J, Konigsberg, W.H.
登録日2013-02-04
公開日2014-02-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Alteration in the cavity size adjacent to the active site of RB69 DNA polymerase changes its conformational dynamics.
Nucleic Acids Res., 41, 2013
4J2A
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RB69 DNA Polymerase L415A Ternary Complex
分子名称: CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3'), DNA (5'-D(*TP*CP*GP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3'), ...
著者Xia, S, Wang, J, Konigsberg, W.H.
登録日2013-02-04
公開日2014-02-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Alteration in the cavity size adjacent to the active site of RB69 DNA polymerase changes its conformational dynamics.
Nucleic Acids Res., 41, 2013
5WDH
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Motor domain of human kinesin family member C1
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIFC1, MAGNESIUM ION, ...
著者Zhu, H, Tempel, W, He, H, Shen, Y, Wang, J, Brothers, G, Landry, R, Arrowsmith, C.H, Edwards, A.M, Park, H, Structural Genomics Consortium (SGC)
登録日2017-07-05
公開日2017-08-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.248 Å)
主引用文献Structural basis of small molecule ATPase inhibition of a human mitotic kinesin motor protein.
Sci Rep, 7, 2017
2LUN
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RNA Aptamer for B. anthracis Ribosomal Protein S8
分子名称: RNA (28-MER)
著者Nikonowicz, E.P, Wang, J.
登録日2012-06-18
公開日2013-12-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and function of TatD exonuclease in DNA repair.
Nucleic Acids Res., 42, 2014
6KVS
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Staphylococcus aureus FabH with covalent inhibitor Oxa1
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 3, 4-chloranyl-N-[[cyclopropylmethyl(methanoyl)amino]methyl]benzamide
著者Yuan, Y, Wang, J.
登録日2019-09-05
公開日2020-09-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of S. aureus FabH, beta-ketoacyl carrier protein synthase
To Be Published
7EKZ
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Structural and functional insights into Hydra Actinoporin-Like Toxin 1 (HALT-1)
分子名称: FORMIC ACID, GLYCEROL, HALT-1
著者Ker, D.S, Sha, X.H, Jonet, M.A, Hwang, J.S, Ng, C.L.
登録日2021-04-07
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Structural and functional analysis of Hydra Actinoporin-Like Toxin 1 (HALT-1).
Sci Rep, 11, 2021
8KA0
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Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-bound calmodulin and a nicotinamide adenine dinucleotide (NAD+)
分子名称: CALCIUM ION, Calmodulin-2, GLYCEROL, ...
著者Lee, Y, Choi, S, Hwang, J, Kim, M.H.
登録日2023-08-02
公開日2024-07-10
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.
Nat Commun, 15, 2024
8KA2
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Crystal structure of the RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) from Vibrio vulnificus
分子名称: RDTND-RID CBD
著者Lee, Y, Choi, S, Hwang, J, Kim, M.H.
登録日2023-08-02
公開日2024-07-10
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (3.38 Å)
主引用文献Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.
Nat Commun, 15, 2024
8K9Z
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Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-bound calmodulin
分子名称: CALCIUM ION, Calmodulin-2, RDTND-RID CBD
著者Lee, Y, Choi, S, Hwang, J, Kim, M.H.
登録日2023-08-02
公開日2024-07-10
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.
Nat Commun, 15, 2024
8KA1
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Crystal structure of Vibrio vulnificus RID-dependent transforming NADase domain (RDTND)/calmodulin-binding domain of Rho inactivation domain (RID-CBD) complexed with Ca2+-free calmodulin
分子名称: Calmodulin-2, MAGNESIUM ION, RDTND-RID CBD
著者Lee, Y, Choi, S, Hwang, J, Kim, M.H.
登録日2023-08-02
公開日2024-07-10
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Dissemination of pathogenic bacteria is reinforced by a MARTX toxin effector duet.
Nat Commun, 15, 2024
8HGU
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Epoxide hydrolase from Bosea sp. PAMC 26642
分子名称: Alpha/beta hydrolase
著者Lee, M.J, Hwang, J, Do, H, Lee, J.H.
登録日2022-11-15
公開日2023-11-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural insights into the distinct substrate preferences of two bacterial epoxide hydrolases.
Int.J.Biol.Macromol., 264, 2024
2XXN
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Structure of the vIRF4-HAUSP TRAF domain complex
分子名称: K10, UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 7
著者Choi, W.C, Hwang, J, Kim, M.H.
登録日2010-11-11
公開日2011-11-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Bilateral Inhibition of Hausp Deubiquitinase by a Viral Interferon Regulatory Factor Protein
Nat.Struct.Mol.Biol., 18, 2011
6II2
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Crystal structure of alpha-beta hydrolase (ABH) and Makes Caterpillars Floppy (MCF)-Like effectors of Vibrio vulnificus MO6-24/O
分子名称: Putative RTX-toxin
著者Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyung, J, Lee, C, Eom, S.H, Kim, M.H.
登録日2018-10-03
公開日2019-08-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6II6
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Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O in complex with a human ADP-ribosylation factor 3 (ARF3)
分子名称: ADP-ribosylation factor 3, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
登録日2018-10-03
公開日2019-08-07
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6A8J
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Crystal structure of bacterial protein toxins
分子名称: GLYCEROL, RTX toxin, SULFATE ION
著者Kim, M.H, Hwang, J, Jang, S.Y.
登録日2018-07-09
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.711 Å)
主引用文献Structural basis of inactivation of Ras and Rap1 small GTPases by Ras/Rap1-specific endopeptidase from the sepsis-causing pathogenVibrio vulnificus
J. Biol. Chem., 293, 2018
6IMP
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Crystal structure of alpha-beta hydrolase (ABH) from Vibrio vulnificus
分子名称: RTX toxin RtxA
著者Kim, M.H, Hwang, J.
登録日2018-10-23
公開日2019-08-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6II0
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Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O
分子名称: GLYCEROL, Putative RTX-toxin
著者Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
登録日2018-10-03
公開日2019-08-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6A7H
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Bacterial protein toxins
分子名称: RTX toxin, SULFATE ION
著者Kim, M.H, Hwang, J, Jang, S.Y.
登録日2018-07-03
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Structural basis of inactivation of Ras and Rap1 small GTPases by Ras/Rap1-specific endopeptidase from the sepsis-causing pathogenVibrio vulnificus
J. Biol. Chem., 293, 2018
6J10
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Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly
分子名称: 6-cyclohexyl-4-methyl-1-oxidanyl-pyridin-2-one, Capsid protein
著者Park, S, Jin, M.S, Cho, Y, Kang, J, Kim, S, Park, M, Park, H, Kim, J, Park, S, Hwang, J, Kim, Y, Kim, Y.J.
登録日2018-12-27
公開日2019-04-17
最終更新日2019-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Ciclopirox inhibits Hepatitis B Virus secretion by blocking capsid assembly.
Nat Commun, 10, 2019
3KZ9
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Crystal structure of the master transcriptional regulator, SmcR, in Vibrio vulnificus provides insight into its DNA recognition mechanism
分子名称: SULFATE ION, SmcR
著者Kim, M.H, Kim, Y, Choi, W.-C, Hwang, J.
登録日2009-12-08
公開日2010-03-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of SmcR, a quorum-sensing master regulator of Vibrio vulnificus, provides insight into its regulation of transcription
J.Biol.Chem., 285, 2010
5X3R
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Crystal structure of the SmcR complexed with QStatin
分子名称: 1-(5-bromanylthiophen-2-yl)sulfonylpyrazole, LuxR family transcriptional regulator, SULFATE ION
著者Jang, S.Y, Hwang, J, Kim, M.H.
登録日2017-02-07
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献QStatin, a Selective Inhibitor of Quorum Sensing inVibrioSpecies
MBio, 9, 2018
3Q2M
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Crystal Structure of Spectinomycin Phosphotransferase, APH(9)-Ia, Protein Kinase Inhibitor CKI-7 Complex
分子名称: N-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE, NICKEL (II) ION, Spectinomycin phosphotransferase
著者Berghuis, A.M, Fong, D.H, Xiong, B, Hwang, J.
登録日2010-12-20
公開日2011-05-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structures of two aminoglycoside kinases bound with a eukaryotic protein kinase inhibitor.
Plos One, 6, 2011
6KYV
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Crystal Structure of RIG-I and hairpin RNA with G-U wobble base pairs
分子名称: Probable ATP-dependent RNA helicase DDX58, RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3'), ZINC ION
著者Kim, K.-H, Hwang, J, Kim, J.H, Son, K.-P, Jang, Y, Kim, M, Kang, S.-J, Lee, J.-O, Choi, B.-S.
登録日2019-09-20
公開日2020-09-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and biophysical properties of RIG-I bound to dsRNA with G-U wobble base pairs.
Rna Biol., 17, 2020
6L0Y
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Structure of dsRNA with G-U wobble base pairs
分子名称: RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3')
著者Kim, K.-H, Hwang, J, Kim, J.H, Son, K.-P, Jang, Y, Kim, M, Kang, S.-J, Lee, J.-O, Choi, B.-S.
登録日2019-09-27
公開日2020-09-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of dsRNA with G-U wobble base pairs
To Be Published

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件を2024-08-07に公開中

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