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PDB: 657 results

6VYW
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BU of 6vyw by Molmil
Escherichia coli transcription-translation complex C3 (TTC-C3) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
Authors:Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
Deposit date:2020-02-27
Release date:2020-09-02
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structural basis of transcription-translation coupling.
Science, 369, 2020
6VYQ
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BU of 6vyq by Molmil
Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 15 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
Authors:Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
Deposit date:2020-02-27
Release date:2020-09-02
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of transcription-translation coupling.
Science, 369, 2020
6VZ7
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BU of 6vz7 by Molmil
Escherichia coli transcription-translation complex C1 (TTC-C1) containing a 27 nt long mRNA spacer, NusG, and fMet-tRNAs at P-site and E-site
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
Authors:Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
Deposit date:2020-02-27
Release date:2020-09-02
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structural basis of transcription-translation coupling.
Science, 369, 2020
6W8T
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BU of 6w8t by Molmil
Crystal structure of metacaspase 4 from Arabidopsis (microcrystals treated with calcium)
Descriptor: Metacaspase-4, SULFATE ION
Authors:Zhu, P, Yu, X.H, Wang, C, Zhang, Q, Liu, W, McSweeney, S, Shanklin, J, Lam, E, Liu, Q.
Deposit date:2020-03-21
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for Ca2+-dependent activation of a plant metacaspase.
Nat Commun, 11, 2020
6VU3
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BU of 6vu3 by Molmil
Cryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacer
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
Authors:Molodtsov, V, Wang, C, Su, M, Ebright, R.
Deposit date:2020-02-14
Release date:2020-09-02
Last modified:2020-09-23
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of transcription-translation coupling.
Science, 369, 2020
6VZJ
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BU of 6vzj by Molmil
Escherichia coli transcription-translation complex A1 (TTC-A1) containing mRNA with a 15 nt long spacer, fMet-tRNAs at E-site and P-site, and lacking transcription factor NusG
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
Authors:Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
Deposit date:2020-02-28
Release date:2020-09-02
Last modified:2020-09-23
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis of transcription-translation coupling.
Science, 369, 2020
6VZ5
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BU of 6vz5 by Molmil
Escherichia coli transcription-translation complex D3 (TTC-D3) containing mRNA with a 21 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
Authors:Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
Deposit date:2020-02-27
Release date:2020-09-02
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (8.9 Å)
Cite:Structural basis of transcription-translation coupling.
Science, 369, 2020
6VYZ
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BU of 6vyz by Molmil
Escherichia coli transcription-translation complex C6 (TTC-C6) containing mRNA with a 21 nt long spacer, NusA, and fMet-tRNAs at E-site and P-site
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
Authors:Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
Deposit date:2020-02-27
Release date:2020-09-02
Last modified:2020-09-23
Method:ELECTRON MICROSCOPY (9.9 Å)
Cite:Structural basis of transcription-translation coupling.
Science, 369, 2020
6NZK
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BU of 6nzk by Molmil
Structural basis for human coronavirus attachment to sialic acid receptors
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike surface glycoprotein, ...
Authors:Tortorici, M.A, Walls, A.C, Lang, Y, Wang, C, Li, Z, Koerhuis, D, Boons, G.J, Bosch, B.J, Rey, F.A, de Groot, R, Veesler, D.
Deposit date:2019-02-13
Release date:2019-06-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis for human coronavirus attachment to sialic acid receptors.
Nat.Struct.Mol.Biol., 26, 2019
6OHW
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BU of 6ohw by Molmil
Structural basis for human coronavirus attachment to sialic acid receptors. Apo-HCoV-OC43 S
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike surface glycoprotein, ...
Authors:Tortorici, M.A, Walls, A.C, Lang, Y, Wang, C, Li, Z, Koerhuis, D, Boons, G.J, Bosch, B.J, Rey, F.A, de Groot, R, Veesler, D.
Deposit date:2019-04-07
Release date:2019-06-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for human coronavirus attachment to sialic acid receptors.
Nat.Struct.Mol.Biol., 26, 2019
5DDZ
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BU of 5ddz by Molmil
Crystal structure of the RTA-c10-P2 complex
Descriptor: 60S acidic ribosomal protein P2, Ricin
Authors:Zhu, Y, Fan, X, Wang, C, Niu, L, Li, X, Teng, M.
Deposit date:2015-08-25
Release date:2016-09-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into the interaction of the ribosomal P stalk protein P2 with a type II ribosome-inactivating protein ricin
Sci Rep, 6, 2016
5XE0
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BU of 5xe0 by Molmil
Crystal structure of EV-D68-3Dpol in complex with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Genome polyprotein
Authors:Xie, W, Wang, C, Wang, Z, Li, Q, Wang, C.
Deposit date:2017-03-30
Release date:2017-06-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure and Thermostability Characterization of Enterovirus D68 3Dpol
J. Virol., 91, 2017
6MUR
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BU of 6mur by Molmil
Cryo-EM structure of Csm-crRNA-target RNA ternary complex in type III-A CRISPR-Cas system
Descriptor: RNA (27-MER), RNA (5'-R(P*GP*CP*AP*AP*AP*CP*CP*GP*CP*CP*UP*CP*UP*GP*CP*CP*CP*GP*C)-3'), Uncharacterized protein, ...
Authors:Jia, N, Wang, C, Eng, E.T, Patel, D.J.
Deposit date:2018-10-23
Release date:2018-12-12
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity.
Mol. Cell, 73, 2019
5H5E
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BU of 5h5e by Molmil
The crystal structure of the yeast arginine methyltransferase SFM1 complexed with SAH
Descriptor: Protein arginine N-methyltransferase SFM1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Xie, W, Wang, C, Zeng, J.
Deposit date:2016-11-05
Release date:2017-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:A flexible cofactor-binding loop in the novel arginine methyltransferase Sfm1.
FEBS Lett., 591, 2017
6MUT
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BU of 6mut by Molmil
Cryo-EM structure of ternary Csm-crRNA-target RNA with anti-tag sequence complex in type III-A CRISPR-Cas system
Descriptor: RNA (5'-R(*GP*UP*GP*GP*AP*AP*AP*GP*GP*CP*GP*GP*GP*CP*AP*GP*AP*GP*GP*C)-3'), RNA (5'-R(P*CP*CP*UP*CP*UP*GP*CP*CP*CP*GP*CP*CP*UP*UP*UP*CP*CP*AP*C)-3'), Uncharacterized protein Csm1, ...
Authors:Jia, N, Wang, C, Eng, E.T, Patel, D.J.
Deposit date:2018-10-23
Release date:2018-12-12
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity.
Mol. Cell, 73, 2019
6BZ9
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BU of 6bz9 by Molmil
Crystal structure of human caspase-1 in complex with Ac-FLTD-CMK
Descriptor: Ac-FLTD-CMK, Caspase-1, DI(HYDROXYETHYL)ETHER
Authors:Xiao, T.S, Yang, J, Liu, Z, Wang, C, Yang, R.
Deposit date:2017-12-22
Release date:2018-06-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Mechanism of gasdermin D recognition by inflammatory caspases and their inhibition by a gasdermin D-derived peptide inhibitor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5H5F
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BU of 5h5f by Molmil
The crystal structure of the yeast arginine methyltransferase SFM1 complexed with SAM
Descriptor: Protein arginine N-methyltransferase SFM1, S-ADENOSYLMETHIONINE
Authors:Xie, W, Wang, C, Zeng, J.
Deposit date:2016-11-05
Release date:2017-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A flexible cofactor-binding loop in the novel arginine methyltransferase Sfm1.
FEBS Lett., 591, 2017
8HIC
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BU of 8hic by Molmil
Crystal structure of UrtA from Prochlorococcus marinus str. MIT 9313 in complex with urea and calcium
Descriptor: CALCIUM ION, Putative urea ABC transporter, substrate binding protein, ...
Authors:Zhang, Y.Z, Wang, P, Wang, C.
Deposit date:2022-11-19
Release date:2023-11-22
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and molecular basis for urea recognition by Prochlorococcus.
J.Biol.Chem., 299, 2023
6MUS
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BU of 6mus by Molmil
Cryo-EM structure of larger Csm-crRNA-target RNA ternary complex in type III-A CRISPR-Cas system
Descriptor: RNA (25-MER), RNA (33-MER), Uncharacterized protein Csm1, ...
Authors:Jia, N, Wang, C, Eng, E.T.
Deposit date:2018-10-23
Release date:2018-12-12
Last modified:2019-01-30
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Type III-A CRISPR-Cas Csm Complexes: Assembly, Periodic RNA Cleavage, DNase Activity Regulation, and Autoimmunity.
Mol. Cell, 73, 2019
5HJK
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BU of 5hjk by Molmil
Crystal Structure of Pyrococcus abyssi Trm5a complexed with SAH
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (guanine(37)-N1)-methyltransferase Trm5a
Authors:Xie, W, Wang, C, Jia, Q.
Deposit date:2016-01-13
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the bifunctional tRNA methyltransferase Trm5a
Sci Rep, 6, 2016
5HJM
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BU of 5hjm by Molmil
Crystal Structure of Pyrococcus abyssi Trm5a complexed with MTA
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, ACETATE ION, HOMOSERINE LACTONE, ...
Authors:Xie, W, Wang, C, Jia, Q.
Deposit date:2016-01-13
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.762 Å)
Cite:Crystal structures of the bifunctional tRNA methyltransferase Trm5a
Sci Rep, 6, 2016
5HJI
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BU of 5hji by Molmil
Crystal Structure of Pyrococcus abyssi Trm5a complexed with adenosine
Descriptor: ADENOSINE, tRNA (guanine(37)-N1)-methyltransferase Trm5a
Authors:Xie, W, Wang, C, Jia, Q.
Deposit date:2016-01-13
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of the bifunctional tRNA methyltransferase Trm5a
Sci Rep, 6, 2016
2VW9
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BU of 2vw9 by Molmil
Single stranded DNA binding protein complex from Helicobacter pylori
Descriptor: POLY-DT, SINGLE-STRANDED DNA BINDING PROTEIN
Authors:Chan, K.-W, Wang, C.-H, Lee, Y.-J, Sun, Y.-J.
Deposit date:2008-06-18
Release date:2009-06-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Single-Stranded DNA-Binding Protein Complex from Helicobacter Pylori Suggests an Ssdna-Binding Surface.
J.Mol.Biol., 388, 2009
5WZK
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BU of 5wzk by Molmil
Structure of APUM23-deletion-of-insert-region-GGAAUUGACGG
Descriptor: Pumilio homolog 23, RNA (5'-R(*GP*GP*AP*AP*UP*UP*GP*AP*CP*GP*G)-3')
Authors:Bao, H, Wang, N, Wang, C, Jiang, Y, Wu, J, Shi, Y.
Deposit date:2017-01-18
Release date:2017-09-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for the specific recognition of 18S rRNA by APUM23.
Nucleic Acids Res., 45, 2017
5H5D
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BU of 5h5d by Molmil
The crystal structure of the yeast arginine methyltransferase SFM1 complexed with MTA
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Protein arginine N-methyltransferase SFM1
Authors:Xie, W, Wang, C, Zeng, J.
Deposit date:2016-11-05
Release date:2017-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A flexible cofactor-binding loop in the novel arginine methyltransferase Sfm1.
FEBS Lett., 591, 2017

226707

數據於2024-10-30公開中

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