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PDB: 1024 results

4E74
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BU of 4e74 by Molmil
Crystal structure of the RHO GTPASE BINDING DOMAIN of Plexin A4A
Descriptor: Plexin-A4, UNKNOWN ATOM OR ION
Authors:Guan, X, Wang, H, Tempel, W, Dong, A, Tong, Y, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2012-03-16
Release date:2012-03-28
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of the RHO GTPASE BINDING DOMAIN of Plexin A4A
to be published
3MD3
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BU of 3md3 by Molmil
Crystal Structure of the First Two RRM Domains of Yeast Poly(U) Binding Protein (Pub1)
Descriptor: GLYCEROL, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, SULFATE ION
Authors:Li, H, Shi, H, Zhu, Z, Wang, H, Niu, L, Teng, M.
Deposit date:2010-03-29
Release date:2010-05-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of the First Two RRM Domains of Yeast Poly(U) Binding Protein (Pub1)
To be published
4ICZ
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BU of 4icz by Molmil
HER2 1221/1222 phosphorylation regulated by PTPN9
Descriptor: HER2, Tyrosine-protein phosphatase non-receptor type 9
Authors:Xu, Y.F, Wang, H.M, Liu, C.H, Yu, X, Sun, J.P.
Deposit date:2012-12-11
Release date:2013-12-11
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:HER2 1221/1222 phosphorylation regulated by PTPN9
To be Published
4JYY
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BU of 4jyy by Molmil
Crystal structure of the azide and iron substituted Clostrium difficile SOD2 complex
Descriptor: AZIDE ION, FE (III) ION, Superoxide dismutase
Authors:Li, W, Ying, T.L, Wang, C.L, Zhao, Y, Wang, H.F, Tan, X.S.
Deposit date:2013-04-01
Release date:2014-04-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Crystal structure of the azide and iron substituted Clostrium difficile SOD2 complex
To be Published
3E1E
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BU of 3e1e by Molmil
Crystal structure of a Thioesterase family protein from Silicibacter pomeroyi. NorthEast Structural Genomics target SiR180A
Descriptor: Thioesterase family protein
Authors:Seetharaman, J, Abashidze, M, Wang, H, Janjua, H, Foote, E.L, Xiao, R, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-08-04
Release date:2008-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a Thioesterase family protein from Silicibacter pomeroyi. NorthEast Structural Genomics target SiR180A
To be Published
8HY0
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BU of 8hy0 by Molmil
Composite cryo-EM structure of the histone deacetylase complex Rpd3S in complex with nucleosome
Descriptor: Chromatin modification-related protein EAF3, DNA (352-MER), Histone H2A, ...
Authors:Cui, H, Wang, H.
Deposit date:2023-01-05
Release date:2023-09-27
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of histone deacetylase complex Rpd3S bound to nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
8HXX
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BU of 8hxx by Molmil
Cryo-EM structure of the histone deacetylase complex Rpd3S
Descriptor: Chromatin modification-related protein EAF3, Histone H3, Histone deacetylase RPD3, ...
Authors:Cui, H, Wang, H.
Deposit date:2023-01-05
Release date:2023-09-27
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of histone deacetylase complex Rpd3S bound to nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
8HXY
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BU of 8hxy by Molmil
Cryo-EM structure of the histone deacetylase complex Rpd3S in complex with nucleosome
Descriptor: Chromatin modification-related protein EAF3, DNA (352-MER), Histone H2A, ...
Authors:Cui, H, Wang, H.
Deposit date:2023-01-05
Release date:2023-09-27
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of histone deacetylase complex Rpd3S bound to nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
8HXZ
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BU of 8hxz by Molmil
Cryo-EM structure of Eaf3 CHD in complex with nucleosome
Descriptor: Chromatin modification-related protein EAF3, DNA (352-MER), Histone H2A, ...
Authors:Cui, H, Wang, H.
Deposit date:2023-01-05
Release date:2023-09-27
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of histone deacetylase complex Rpd3S bound to nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
4H58
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BU of 4h58 by Molmil
BRAF in complex with compound 3
Descriptor: CHLORIDE ION, N-(4-{[(2-methoxyethyl)amino]methyl}phenyl)-6-(pyridin-4-yl)quinazolin-2-amine, Serine/threonine-protein kinase B-raf
Authors:Vasbinder, M, Aquila, B, Augustin, M, Chueng, T, Cook, D, Drew, L, Fauber, B, Glossop, S, Godin, R, Grondine, M, Hennessy, E, Johannes, J, Lee, S, Lyne, P, Moertl, M, Omer, C, Palakurthi, S, Pontz, T, Read, J, Sha, L, Shen, M, Steinbacher, S, Wang, H, Wu, A, Ye, M, Bagal, B.
Deposit date:2012-09-18
Release date:2013-02-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Discovery and Optimization of a Novel Series of Potent Mutant B-Raf(V600E) Selective Kinase Inhibitors.
J.Med.Chem., 56, 2013
3B57
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BU of 3b57 by Molmil
Crystal structure of the Lin1889 protein (Q92AN1) from Listeria innocua. Northeast Structural Consortium target LkR65
Descriptor: Lin1889 protein, MAGNESIUM ION
Authors:Kuzin, A.P, Abashidze, M, Seetharaman, J, Benach, J, Forouhar, F, Vorobiev, S.M, Wang, H, Janjua, H, Cunningham, K, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-10-25
Release date:2007-11-06
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the Lin1889 protein (Q92AN1) from Listeria innocua.
To be Published
4QAP
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BU of 4qap by Molmil
The second sphere residue T263 is important for function and activity of PTP1B through modulating WPD loop
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1
Authors:Xiao, P, Wang, X, Wang, H.M, Fu, X.L, Cui, F.A, Yu, X, Bi, W.X, Sun, J.P.
Deposit date:2014-05-05
Release date:2015-02-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:The second-sphere residue T263 is important for the function and catalytic activity of PTP1B via interaction with the WPD-loop
Int.J.Biochem.Cell Biol., 57, 2014
3KB1
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BU of 3kb1 by Molmil
Crystal Structure of the Nucleotide-binding protein AF_226 in complex with ADP from Archaeoglobus fulgidus, Northeast Structural Genomics Consortium Target GR157
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Nucleotide-binding protein, ZINC ION
Authors:Forouhar, F, Lew, S, Abashidze, M, Seetharaman, J, Mao, M, Xiao, R, Ciccosanti, C, Wang, H, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-10-19
Release date:2009-10-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Northeast Structural Genomics Consortium Target GR157
To be Published
8K0K
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BU of 8k0k by Molmil
Crystal structure of Csy complex
Descriptor: Csy1, Csy2, Csy3, ...
Authors:Feng, Y, Wang, H.
Deposit date:2023-07-09
Release date:2024-07-10
Last modified:2025-01-22
Method:X-RAY DIFFRACTION (2.995 Å)
Cite:Cas1 mediates the interference stage in a phage-encoded CRISPR-Cas system.
Nat.Chem.Biol., 20, 2024
5ZAL
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BU of 5zal by Molmil
Cryo-EM structure of human Dicer and its complexes with a pre-miRNA substrate
Descriptor: Endoribonuclease Dicer, RISC-loading complex subunit TARBP2, RNA (73-mer)
Authors:Liu, Z, Wang, J, Cheng, H, Ke, X, Sun, L, Zhang, Q.C, Wang, H.-W.
Deposit date:2018-02-07
Release date:2018-05-09
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Cryo-EM Structure of Human Dicer and Its Complexes with a Pre-miRNA Substrate.
Cell, 173, 2018
7EW2
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BU of 7ew2 by Molmil
Cryo-EM structure of pFTY720-bound Sphingosine 1-phosphate receptor 3 in complex with Gi protein
Descriptor: (2~{S})-2-azanyl-4-(4-octylphenyl)-2-[[oxidanyl-bis(oxidanylidene)-$l^{6}-phosphanyl]oxymethyl]butan-1-ol, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhao, C, Wang, W, Wang, H.L, Shao, Z.H.
Deposit date:2021-05-24
Release date:2021-09-29
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into sphingosine-1-phosphate recognition and ligand selectivity of S1PR3-Gi signaling complexes.
Cell Res., 32, 2022
5DJT
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BU of 5djt by Molmil
Crystal structure of LOV2 (C450A) domain in complex with Zdk2
Descriptor: CHLORIDE ION, COPPER (II) ION, Engineered protein, ...
Authors:Tarnawski, M, Wang, H, Yumerefendi, H, Hahn, K.M, Schlichting, I.
Deposit date:2015-09-02
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:LOVTRAP: an optogenetic system for photoinduced protein dissociation.
Nat.Methods, 13, 2016
3TDL
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BU of 3tdl by Molmil
Structure of human serum albumin in complex with DAUDA
Descriptor: 11-({[5-(dimethylamino)naphthalen-1-yl]sulfonyl}amino)undecanoic acid, MYRISTIC ACID, Serum albumin
Authors:Wang, Y, Luo, Z, Shi, X, Wang, H, Nie, L.
Deposit date:2011-08-11
Release date:2012-06-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A fluorescent fatty acid probe, DAUDA, selectively displaces two myristates bound in human serum albumin
Protein Sci., 20, 2011
9E2G
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BU of 9e2g by Molmil
Cryo-EM structure of 48 nm repeat of microtubule doublet from T. brucei flagellum
Descriptor: CCDC81 HU domain-containing protein, CMF34/CARP4, Calcium-binding protein, ...
Authors:Xia, X, Shimogawa, M.M, Wang, H, Liu, S, Wijono, A, Langousis, G, Kassem, A.M, Wohlschlegel, J.A, Hill, K, Zhou, Z.H.
Deposit date:2024-10-22
Release date:2025-03-12
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Trypanosome doublet microtubule structures reveal flagellum assembly and motility mechanisms.
Science, 387, 2025
9E5C
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BU of 9e5c by Molmil
Cryo-EM structure of 96 nm repeat of microtubule doublet from T. brucei flagellum
Descriptor: 33 kDa inner dynein arm light chain, axonemal, putative, ...
Authors:Xia, X, Shimogawa, M.M, Wang, H, Liu, S, Wijono, A, Langousis, G, Kassem, A.M, Wohlschlegel, J.A, Hill, K, Zhou, Z.H.
Deposit date:2024-10-28
Release date:2025-03-12
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Trypanosome doublet microtubule structures reveal flagellum assembly and motility mechanisms.
Science, 387, 2025
4QAH
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BU of 4qah by Molmil
The second sphere residue T263 is important for function and activity of PTP1B through modulating WPD loop
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1
Authors:Xiao, P, Wang, X, Wang, H.M, Fu, X.L, Cui, F.A, Bi, W.X.
Deposit date:2014-05-05
Release date:2014-12-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:The second-sphere residue T263 is important for the function and catalytic activity of PTP1B via interaction with the WPD-loop
Int.J.Biochem.Cell Biol., 57C, 2014
2Z8N
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BU of 2z8n by Molmil
Structural basis for the catalytic mechanism of phosphothreonine lyase
Descriptor: 27.5 kDa virulence protein, SULFATE ION
Authors:Chen, L, Wang, H, Gu, L, Huang, N, Zhou, J.M, Chai, J.
Deposit date:2007-09-07
Release date:2007-12-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the catalytic mechanism of phosphothreonine lyase.
Nat.Struct.Mol.Biol., 15, 2008
3MA5
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BU of 3ma5 by Molmil
Crystal structure of the tetratricopeptide repeat domain protein Q2S6C5_SALRD from Salinibacter ruber. Northeast Structural Genomics Consortium Target SrR115c.
Descriptor: Tetratricopeptide repeat domain protein
Authors:Vorobiev, S, Neely, H, Seetharaman, J, Wang, H, Foote, E.L, Ciccosanti, C, Mao, L, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-03-23
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the tetratricopeptide repeat domain protein Q2S6C5_SALRD from Salinibacter ruber.
To be Published
3K20
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BU of 3k20 by Molmil
X-ray structure of oxidoreductase from corynebacterium diphtheriae,hexagonal crystal form. northeast structural genomics consortium target cdr100d
Descriptor: SULFATE ION, oxidoreductase
Authors:Kuzin, A, Lew, S, Sahdev, S, Xiao, R, Ciccosanti, C, Wang, H, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-09-29
Release date:2009-10-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Northeast Structural Genomics Consortium Target CdR100D
To be Published
3GW4
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BU of 3gw4 by Molmil
Crystal structure of uncharacterized protein from Deinococcus radiodurans. Northeast Structural Genomics Consortium Target DrR162B.
Descriptor: Uncharacterized protein
Authors:Kuzin, A.P, Abashidze, M, Seetharaman, J, Sahdev, S, Xiao, R, Foote, E.L, Ciccosanti, C, Wang, H, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-03-31
Release date:2009-04-21
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Northeast Structural Genomics Consortium Target DrR162B
To be published

236060

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