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PDB: 125 results

8A8H
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APS kinase from Methanothermococcus thermolithotrophicus refined to 1.77 A
Descriptor: 1,2-ETHANEDIOL, APS kinase from Methanothermococcus thermolithotrophicus, CHLORIDE ION, ...
Authors:Jespersen, M, Wagner, T.
Deposit date:2022-06-23
Release date:2023-04-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Assimilatory sulfate reduction in the marine methanogen Methanothermococcus thermolithotrophicus.
Nat Microbiol, 8, 2023
8A8D
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BU of 8a8d by Molmil
ATP sulfurylase from Methanothermococcus thermolithotrophicus - monoclinic form
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ATP sulfurylase from Methanothermococcus thermolithotrophicus, ...
Authors:Jespersen, M, Wagner, T.
Deposit date:2022-06-22
Release date:2023-04-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Assimilatory sulfate reduction in the marine methanogen Methanothermococcus thermolithotrophicus.
Nat Microbiol, 8, 2023
8A8O
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BU of 8a8o by Molmil
PAPS reductase from Methanothermococcus thermolithotrophicus refined to 1.45 A
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, Alpha-subunit of the PAPS reductase from Methanothermococcus thermolithotrophicus, ...
Authors:Jespersen, M, Wagner, T.
Deposit date:2022-06-23
Release date:2023-04-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Assimilatory sulfate reduction in the marine methanogen Methanothermococcus thermolithotrophicus.
Nat Microbiol, 8, 2023
8A8K
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BU of 8a8k by Molmil
PAP phosphatase from Methanothermococcus thermolithotrophicus refined to 3.1 A
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCEROL, MANGANESE (II) ION, ...
Authors:Jespersen, M, Wagner, T.
Deposit date:2022-06-23
Release date:2023-04-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Assimilatory sulfate reduction in the marine methanogen Methanothermococcus thermolithotrophicus.
Nat Microbiol, 8, 2023
6ZK8
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BU of 6zk8 by Molmil
Native crystal structure of anaerobic F420H2-Oxidase from Methanothermococcus thermolithotrophicus at 1.8A resolution
Descriptor: Coenzyme F420H2 oxidase (FprA), DI(HYDROXYETHYL)ETHER, FE (III) ION, ...
Authors:Engilberge, S, Wagner, T, Carpentier, P, Girard, E, Shima, S.
Deposit date:2020-06-30
Release date:2020-11-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Krypton-derivatization highlights O 2 -channeling in a four-electron reducing oxidase.
Chem.Commun.(Camb.), 56, 2020
6ZLF
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BU of 6zlf by Molmil
Aerobic crystal structure of F420H2-Oxidase from Methanothermococcus thermolithotrophicus at 1.8A resolution under 125 bars of krypton
Descriptor: CHLORIDE ION, Coenzyme F420H2 oxidase (FprA), FLAVIN MONONUCLEOTIDE, ...
Authors:Engilberge, S, Wagner, T, Carpentier, P, Girard, E, Shima, S.
Deposit date:2020-06-30
Release date:2020-11-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Krypton-derivatization highlights O 2 -channeling in a four-electron reducing oxidase.
Chem.Commun.(Camb.), 56, 2020
6HF7
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BU of 6hf7 by Molmil
Crystal structure of the adenylate kinase from Methanothermococcus thermolithotrophicus co-crystallized with Tb-Xo4
Descriptor: Adenylate kinase, GLYCEROL, MAGNESIUM ION, ...
Authors:Engilberge, S, Wagner, T, Santoni, G, Breyton, C, Shima, S, Franzetti, B, Riobe, F, Maury, O, Girard, E.
Deposit date:2018-08-21
Release date:2019-06-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Protein crystal structure determination with the crystallophore, a nucleating and phasing agent.
J.Appl.Crystallogr., 52, 2019
7NEP
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BU of 7nep by Molmil
Homology model of the in situ actomyosin complex from the A-band of mouse psoas muscle sarcomere in the rigor state
Descriptor: Actin, alpha skeletal muscle, Myosin light chain 1/3, ...
Authors:Wang, Z, Grange, M, Wagner, T, Kho, A.L, Gautel, M, Raunser, S.
Deposit date:2021-02-04
Release date:2021-04-07
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (10.2 Å)
Cite:The molecular basis for sarcomere organization in vertebrate skeletal muscle.
Cell, 184, 2021
6HAC
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BU of 6hac by Molmil
Crystal structure of [Fe]-hydrogenase (Hmd) holoenzyme from Methanococcus aeolicus (open form)
Descriptor: 5,10-methenyltetrahydromethanopterin hydrogenase, GLYCEROL, PENTAETHYLENE GLYCOL, ...
Authors:Huang, G, Wagner, T, Wodrich, M.D, Ataka, K, Bill, E, Ermler, U, Hu, X, Shima, S.
Deposit date:2018-08-07
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The atomic-resolution crystal structure of activated [Fe]-hydrogenase
Nat Catal, 2019
6HF6
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BU of 6hf6 by Molmil
Crystal structure of the Protease 1 (E29A,E60A,E80A) from Pyrococcus horikoshii co-crystallized with Tb-Xo4.
Descriptor: Deglycase PH1704, MALONATE ION, TERBIUM(III) ION, ...
Authors:Engilberge, S, Wagner, T, Santoni, G, Breyton, C, Shima, S, Franzetti, B, Riobe, F, Maury, O, Girard, E.
Deposit date:2018-08-21
Release date:2019-06-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein crystal structure determination with the crystallophore, a nucleating and phasing agent.
J.Appl.Crystallogr., 52, 2019
6HK1
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BU of 6hk1 by Molmil
Crystal structure of the Thiazole synthase from Methanothermococcus thermolithotrophicus co-crystallized with Tb-Xo4
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SODIUM ION, ...
Authors:Engilberge, S, Wagner, T, Santoni, G, Breyton, C, Shima, S, Franzetti, B, Riobe, F, Maury, O, Girard, E.
Deposit date:2018-09-05
Release date:2019-06-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Protein crystal structure determination with the crystallophore, a nucleating and phasing agent.
J.Appl.Crystallogr., 52, 2019
6HAE
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BU of 6hae by Molmil
Crystal structure of [Fe]-hydrogenase (Hmd) from Methanococcus aeolicus in complex with FeGP cofactor and methenyl-tetrahydromethanopterin (close form B)
Descriptor: 1-{4-[(6S,6aR,7R)-3-amino-6,7-dimethyl-1-oxo-1,2,5,6,6a,7-hexahydro-8H-imidazo[1,5-f]pteridin-10-ium-8-yl]phenyl}-1-deoxy-5-O-{5-O-[(S)-{[(1S)-1,3-dicarboxypropyl]oxy}(hydroxy)phosphoryl]-alpha-D-ribofuranosyl}-D-ribitol, 5,10-methenyltetrahydromethanopterin hydrogenase, CHLORIDE ION, ...
Authors:Huang, G, Wagner, T, Wodrich, M.D, Ataka, K, Bill, E, Ermler, U, Hu, X, Shima, S.
Deposit date:2018-08-07
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The atomic-resolution crystal structure of activated [Fe]-hydrogenase
Nat Catal, 2019
6EQO
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BU of 6eqo by Molmil
Tri-functional propionyl-CoA synthase of Erythrobacter sp. NAP1 with bound NADP+ and phosphomethylphosphonic acid adenylate ester
Descriptor: Acetyl-coenzyme A synthetase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
Authors:Zarzycki, J, Bernhardsgruetter, I, Voegeli, B, Wagner, T, Engilberge, S, Girard, E, Shima, S, Erb, T.J.
Deposit date:2017-10-13
Release date:2018-10-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The multicatalytic compartment of propionyl-CoA synthase sequesters a toxic metabolite.
Nat. Chem. Biol., 14, 2018
6HUY
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BU of 6huy by Molmil
HmdII from Desulfurobacterium thermolithotrophum reconstitued with Fe-guanylylpyridinol (FeGP) cofactor and co-crystallized with methenyl-tetrahydrofolate form A
Descriptor: 5,10-Methenyltetrahydrofolate, Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase-related protein, DIMETHYL SULFOXIDE, ...
Authors:Watanabe, T, Wagner, T, Huang, G, Kahnt, J, Ataka, K, Ermler, U, Shima, S.
Deposit date:2018-10-09
Release date:2019-01-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Bacterial [Fe]-Hydrogenase Paralog HmdII Uses Tetrahydrofolate Derivatives as Substrates.
Angew. Chem. Int. Ed. Engl., 58, 2019
2W0F
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BU of 2w0f by Molmil
Potassium Channel KcsA-Fab Complex with Tetraoctylammonium
Descriptor: ANTIBODY FAB FRAGMENT HEAVY CHAIN, ANTIBODY FAB FRAGMENT LIGHT CHAIN, COBALT (II) ION, ...
Authors:Lenaeus, M.J, Focia, P.J, Wagner, T, Gross, A.
Deposit date:2008-08-14
Release date:2009-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Kcsa in Complex with Symmetrical Quaternary Ammonium Compounds Reveal a Hydrophobic Binding Site.
Biochemistry, 53, 2014
8A8G
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BU of 8a8g by Molmil
ATP sulfurylase from Methanothermococcus thermolithotrophicus - orthorhombic form
Descriptor: ATP sulfurylase from Methanothermococcus thermolithotrophicus, GLYCEROL, ZINC ION
Authors:Jespersen, M, Wagner, T.
Deposit date:2022-06-23
Release date:2023-04-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Assimilatory sulfate reduction in the marine methanogen Methanothermococcus thermolithotrophicus.
Nat Microbiol, 8, 2023
8Q5X
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BU of 8q5x by Molmil
MgADP-bound Fe protein of the molybdenum nitrogenase from Methanococcus maripaludis
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Maslac, N, Wagner, T.
Deposit date:2023-08-09
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales.
Febs J., 2024
8Q5V
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BU of 8q5v by Molmil
MgADP-bound Fe protein of the molybdenum nitrogenase from Methanothermococcus thermolithotrophicus
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Maslac, N, Wagner, T.
Deposit date:2023-08-09
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales.
Febs J., 2024
8Q5W
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BU of 8q5w by Molmil
MgADP-bound Fe protein of the molybdenum nitrogenase from Methanocaldococcus infernus
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Maslac, N, Wagner, T.
Deposit date:2023-08-09
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales.
Febs J., 2024
8Q50
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BU of 8q50 by Molmil
Nitrogenase Fe protein from Methanothermococcus thermolithotrophicus, tetragonal crystalline form at 1.91-A resolution
Descriptor: ACETATE ION, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Maslac, N, Wagner, T.
Deposit date:2023-08-07
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales.
Febs J., 2024
8Q5T
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BU of 8q5t by Molmil
Nitrogenase Fe protein from Methanothermococcus thermolithotrophicus, monoclinic crystalline form at 2.31-A resolution
Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, Nitrogenase iron protein 1
Authors:Maslac, N, Wagner, T.
Deposit date:2023-08-09
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales.
Febs J., 2024
2JK5
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BU of 2jk5 by Molmil
Potassium Channel KcsA in complex with Tetrabutylammonium in high K
Descriptor: (2S)-3-HYDROXY-2-(NONANOYLOXY)PROPYL LAURATE, ANTIBODY FAB FRAGMENT HEAVY CHAIN, ANTIBODY FAB FRAGMENT LIGHT CHAIN, ...
Authors:Lenaeus, M.J, Focia, P.J, Wagner, T, Gross, A.
Deposit date:2008-08-15
Release date:2009-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Kcsa in Complex with Symmetrical Quaternary Ammonium Compounds Reveal a Hydrophobic Binding Site.
Biochemistry, 53, 2014
6HAV
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BU of 6hav by Molmil
Crystal structure of [Fe]-hydrogenase (Hmd) from Methanococcus aeolicus in complex with FeGP and methenyl-tetrahydromethanopterin (close form A) at 1.06 A resolution
Descriptor: 1-{4-[(6S,6aR,7R)-3-amino-6,7-dimethyl-1-oxo-1,2,5,6,6a,7-hexahydro-8H-imidazo[1,5-f]pteridin-10-ium-8-yl]phenyl}-1-deoxy-5-O-{5-O-[(S)-{[(1S)-1,3-dicarboxypropyl]oxy}(hydroxy)phosphoryl]-alpha-D-ribofuranosyl}-D-ribitol, 5,10-methenyltetrahydromethanopterin hydrogenase, GLYCEROL, ...
Authors:Huang, G, Wagner, T, Wodrich, M.D, Ataka, K, Bill, E, Ermler, U, Hu, X, Shima, S.
Deposit date:2018-08-08
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:The atomic-resolution crystal structure of activated [Fe]-hydrogenase
Nat Catal, 2019
8Q4G
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BU of 8q4g by Molmil
Thin filament from FIB milled relaxed left ventricular mouse myofibrils
Descriptor: Actin, alpha cardiac muscle 1, Tropomyosin alpha-1 chain
Authors:Tamborrini, D, Wang, Z, Wagner, T, Tacke, S, Stabrin, M, Grange, M, Kho, A.L, Bennet, P, Rees, M, Gautel, M, Raunser, S.
Deposit date:2023-08-06
Release date:2023-11-01
Last modified:2023-12-06
Method:ELECTRON MICROSCOPY (8 Å)
Cite:Structure of the native myosin filament in the relaxed cardiac sarcomere.
Nature, 623, 2023
1DSZ
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BU of 1dsz by Molmil
STRUCTURE OF THE RXR/RAR DNA-BINDING DOMAIN HETERODIMER IN COMPLEX WITH THE RETINOIC ACID RESPONSE ELEMENT DR1
Descriptor: DNA (5'-D(*CP*AP*GP*GP*TP*CP*AP*AP*AP*GP*GP*TP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*TP*TP*GP*AP*CP*CP*TP*G)-3'), RETINOIC ACID RECEPTOR ALPHA, ...
Authors:Rastinejad, F, Wagner, T, Zhao, Q, Khorasanizadeh, S.
Deposit date:2000-01-10
Release date:2000-07-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the RXR-RAR DNA-binding complex on the retinoic acid response element DR1.
EMBO J., 19, 2000

223532

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