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PDB: 225 results

4M1J
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BU of 4m1j by Molmil
Crystal structure of Pseudomonas aeruginosa PvdQ in complex with a transition state analogue
Descriptor: Acyl-homoserine lactone acylase PvdQ subunit alpha, Acyl-homoserine lactone acylase PvdQ subunit beta, GLYCEROL, ...
Authors:Wu, R, Clevenger, K, Er, J, Fast, W.L, Liu, D.
Deposit date:2013-08-02
Release date:2013-08-28
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rational Design of a Transition State Analogue with Picomolar Affinity for Pseudomonas aeruginosa PvdQ, a Siderophore Biosynthetic Enzyme.
Acs Chem.Biol., 8, 2013
5T4J
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BU of 5t4j by Molmil
PLP and GABA Trigger GabR-Mediated Transcription Regulation in Bacillus subsidies via External Aldimine Formation
Descriptor: GAMMA-AMINO-BUTANOIC ACID, HTH-type transcriptional regulatory protein GabR, PYRIDOXAL-5'-PHOSPHATE
Authors:Wu, R, Sanishvili, R, Belitsky, B.R, Juncosa, J.I, Le, H.V, Lehrer, H.J.S, Farley, M, Silverman, R.B, Petsko, G.A, Ringe, D, Liu, D.
Deposit date:2016-08-29
Release date:2017-03-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.231 Å)
Cite:PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5T4L
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BU of 5t4l by Molmil
PLP and GABA Trigger GabR-Mediated Transcription Regulation in Bacillus subsidies via External Aldimine Formation
Descriptor: (4R)-4-amino-6-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}hexanoic acid, Aspartate aminotransferase
Authors:Wu, R, Sanishvili, R, Belitsky, B.R, Juncosa, J.I, Le, H.V, Lehrer, H.J.S, Farley, M, Silverman, R.B, Petsko, G.A, Ringe, D, Liu, D.
Deposit date:2016-08-29
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5T4K
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BU of 5t4k by Molmil
PLP and GABA Trigger GabR-Mediated Transcription Regulation in Bacillus subsidies via External Aldimine Formation
Descriptor: (4S)-5-fluoro-4-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]pentanoic acid, HTH-type transcriptional regulatory protein GabR
Authors:Wu, R, Sanishvili, R, Belitsky, B.R, Juncosa, J.I, Le, H.V, Lehrer, H.J.S, Farley, M, Silverman, R.B, Petsko, G.A, Ringe, D, Liu, D.
Deposit date:2016-08-29
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.245 Å)
Cite:PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4N01
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BU of 4n01 by Molmil
The crystal structure of a periplasmic binding protein from Veillonella parvula dsm 2008
Descriptor: FORMIC ACID, GLYCEROL, Periplasmic binding protein, ...
Authors:Wu, R, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-09-30
Release date:2013-12-18
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:The crystal structure of a periplasmic binding protein from Veillonella parvula dsm 2008
To be Published
4RBN
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BU of 4rbn by Molmil
The crystal structure of Nitrosomonas europaea sucrose synthase: Insights into the evolutionary origin of sucrose metabolism in prokaryotes
Descriptor: Sucrose synthase:Glycosyl transferases group 1
Authors:Wu, R, Asencion Diez, M.D, Figueroa, C.M, Machtey, M, Iglesias, A.A, Ballicora, M.A, Liu, D.
Deposit date:2014-09-12
Release date:2015-07-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:The Crystal Structure of Nitrosomonas europaea Sucrose Synthase Reveals Critical Conformational Changes and Insights into Sucrose Metabolism in Prokaryotes.
J.Bacteriol., 197, 2015
4RJ0
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BU of 4rj0 by Molmil
The crystal structure of Y333N mutant pyridoxal-dependent decarboxylase from Sphaerobacter thermophilus dsm 20745
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, GLYCEROL, PHOSPHATE ION, ...
Authors:Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-10-07
Release date:2014-11-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The crystal structure of Y333N mutant pyridoxal-dependent decarboxylase from Sphaerobacter thermophilus dsm 20745
To be Published
4RM7
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BU of 4rm7 by Molmil
The crystal structure of acyl-COA dehydrogenase from Slackia heliotrinireducens DSM 20476
Descriptor: Acyl-CoA dehydrogenase
Authors:Wu, R, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-10-20
Release date:2014-12-24
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.529 Å)
Cite:The crystal structure of acyl-COA dehydrogenase from Slackia heliotrinireducens DSM 20476
To be Published
4RT5
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BU of 4rt5 by Molmil
The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from planctomyces limnophilus dsm 3776
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Glyoxalase/bleomycin resistance protein/dioxygenase, ...
Authors:Wu, R, Bearden, J, Kim, Y, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-11-13
Release date:2014-12-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from Planctomyces limnophilus dsm 3776
TO BE PUBLISHED
4RU0
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BU of 4ru0 by Molmil
The crystal structure of abc transporter permease from pseudomonas fluorescens group
Descriptor: 3,6,9,12,15-PENTAOXAHEPTADECANE, GLYCEROL, Putative branched-chain amino acid ABC transporter, ...
Authors:Wu, R, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-11-17
Release date:2014-11-26
Method:X-RAY DIFFRACTION (2.442 Å)
Cite:The crystal structure of abc transporter permease from pseudomonas fluorescens group
To be Published
4M88
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BU of 4m88 by Molmil
Crystal structure of extracellular ligand-binding receptor from Verminephrobacter eiseniae ef01-2
Descriptor: Extracellular ligand-binding receptor, GLYCEROL
Authors:Wu, R, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-08-13
Release date:2013-11-06
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.762 Å)
Cite:Crystal structure of extracellular ligand-binding receptor from Verminephrobacter eiseniae ef01-2
To be Published
4MAA
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BU of 4maa by Molmil
The Crystal Structure of Amino Acid ABC Transporter Substrate-binding Protein from Pseudomonas fluorescens Pf-5
Descriptor: CHLORIDE ION, GLYCEROL, Putative branched-chain amino acid ABC transporter, ...
Authors:Wu, R, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-08-15
Release date:2013-12-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of Amino Acid ABC Transporter Substrate-binding Protein from Pseudomonas fluorescens Pf-5
To be Published
5UBL
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BU of 5ubl by Molmil
A circularly permuted version of PvdQ (cpPvdQ)
Descriptor: Acyl-homoserine lactone acylase PvdQ
Authors:Wu, R, Mascarenhas, R, Catlin, D, Clevenger, K, Fast, W, Liu, D.
Deposit date:2016-12-20
Release date:2017-03-01
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Circular Permutation Reveals a Chromophore Precursor Binding Pocket of the Siderophore Tailoring Enzyme PvdQ
To Be Published
3NRT
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BU of 3nrt by Molmil
The crystal structure of putative ryanodine receptor from Bacteroides thetaiotaomicron VPI-5482
Descriptor: GLYCEROL, MAGNESIUM ION, Putative ryanodine receptor
Authors:Wu, R, Zhang, R, James, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-06-30
Release date:2010-09-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:he crystal strucutre of putative ryanodine receptor from Bacteroides thetaiotaomicron VPI-5482
To be Published
3ICY
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BU of 3icy by Molmil
The crystal structure of sensory box histidine kinase/response regulator domain from Chlorobium tepidum TLS
Descriptor: GLYCEROL, Sensor protein
Authors:Wu, R, Shonda, C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-07-19
Release date:2010-01-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.684 Å)
Cite:The crystal structure of sensory box histidine kinase/response regulator domain from Chlorobium
To be Published
4W9R
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BU of 4w9r by Molmil
Crystal structure of uncharacterised protein Coch_1243 from Capnocytophaga ochracea DSM 7271
Descriptor: ACETATE ION, GLYCEROL, Uncharacterized protein
Authors:Chang, C, Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-27
Release date:2014-09-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Crystal structure of uncharacterised protein Coch_1243 from Capnocytophaga ochracea DSM 7271
To Be Published
3CW9
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BU of 3cw9 by Molmil
4-Chlorobenzoyl-CoA Ligase/Synthetase in the Thioester-forming Conformation, bound to 4-chlorophenacyl-CoA
Descriptor: 1,2-ETHANEDIOL, 4-Chlorophenacyl-coenzyme A, 4-chlorobenzoyl CoA ligase, ...
Authors:Reger, A.S, Cao, J, Wu, R, Dunaway-Mariano, D, Gulick, A.M.
Deposit date:2008-04-21
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of a 140 degrees domain movement in the two-step reaction catalyzed by 4-chlorobenzoate:CoA ligase.
Biochemistry, 47, 2008
2GK3
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BU of 2gk3 by Molmil
Cytoplasmic Protein STM3548 from Salmonella typhimurium
Descriptor: GLYCEROL, putative cytoplasmic protein
Authors:Petrova, T, Cuff, M.E, Wu, R.Y, Holzle, D, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-03-31
Release date:2006-05-02
Last modified:2011-08-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Novel hexamerization motif is discovered in a conserved cytoplasmic protein from Salmonella typhimurium.
J.Struct.Funct.Genom., 8, 2007
4YCS
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BU of 4ycs by Molmil
Crystal structure of putative lipoprotein from Peptoclostridium difficile 630 (fragment)
Descriptor: ACETATE ION, GLYCEROL, SODIUM ION, ...
Authors:Michalska, K, Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-02-20
Release date:2015-03-18
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of putative lipoprotein from Peptoclostridium difficile 630 (fragment)
To Be Published
7LA6
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BU of 7la6 by Molmil
THE STRUCTURE OF A SENSOR DOMAIN OF A HISTIDINE KINASE (VxrA) FROM VIBRIO CHOLERAE O1 BIOVAR ELTOR STR. N16961, N239 deletion mutant
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ...
Authors:Tan, K, Wu, R, Jedrzejczak, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-01-05
Release date:2021-01-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Sensor Domain of Histidine Kinase VxrA of Vibrio cholerae - A Hairpin-swapped Dimer and its Conformational Change.
J.Bacteriol., 203, 2021
6X1L
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BU of 6x1l by Molmil
The crystal structure of a functional uncharacterized protein KP1_0663 from Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044
Descriptor: WbbZ protein
Authors:Tan, K, Wu, R, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-05-19
Release date:2020-06-03
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae.
Microbiol Resour Announc, 12, 2023
2FPN
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BU of 2fpn by Molmil
The crystal structure of the ywmB protein from Bacillus subtilis
Descriptor: ywmB
Authors:Zhang, R, Wu, R, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-01-16
Release date:2006-03-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:The crystal structure of the ywmB protein from Bacillus subtilis
To be Published
2FUV
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BU of 2fuv by Molmil
Phosphoglucomutase from Salmonella typhimurium.
Descriptor: MAGNESIUM ION, phosphoglucomutase
Authors:Osipiuk, J, Wu, R, Holzle, D, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-01-27
Release date:2006-03-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystal structure of phosphoglucomutase from Salmonella typhimurium.
To be Published
2GBO
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BU of 2gbo by Molmil
Protein of Unknown Function EF2458 from Enterococcus faecalis
Descriptor: UPF0358 protein EF2458
Authors:Osipiuk, J, Wu, R, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-03-10
Release date:2006-04-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray crystal structure of conserved hypothetical protein EF_2458 from Enterococcus faecalis.
To be Published
2GRE
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BU of 2gre by Molmil
Crystal structure of Deblocking aminopeptidase from Bacillus cereus
Descriptor: Deblocking aminopeptidase, SULFATE ION
Authors:Chang, C, Wu, R, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-04-24
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of Deblocking aminopeptidase from Bacillus cereus
To be Published

219869

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