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PDB: 1473 results

6KH4
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Design and crystal structure of protein MOFs with ferritin nanocages as linkers and nickel clusters as nodes
Descriptor: FE (III) ION, Ferritin, NICKEL (II) ION
Authors:Gu, C, Chen, H, Wang, Y, Zhang, T, Wang, H, Zhao, G.
Deposit date:2019-07-12
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Structural Insight into Binary Protein Metal-Organic Frameworks with Ferritin Nanocages as Linkers and Nickel Clusters as Nodes.
Chemistry, 26, 2020
3GO7
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BU of 3go7 by Molmil
Crystal Structure of M. tuberculosis ribokinase (Rv2436) in complex with ribose
Descriptor: MAGNESIUM ION, RIBOKINASE RBSK, alpha-D-ribofuranose
Authors:Masters, E.I, Sun, Y, Wang, Y, Parker, W.B, Li, R.
Deposit date:2009-03-18
Release date:2010-03-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and biochemical characterization of M.tuberculosis ribokinase (Rv2436)
To be Published
2F0X
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BU of 2f0x by Molmil
Crystal structure and function of human thioesterase superfamily member 2(THEM2)
Descriptor: SULFATE ION, Thioesterase superfamily member 2
Authors:Cheng, Z, Song, F, Shan, X, Wang, Y, Wei, Z, Gong, W.
Deposit date:2005-11-14
Release date:2006-10-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human thioesterase superfamily member 2
Biochem.Biophys.Res.Commun., 349, 2006
3GO6
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BU of 3go6 by Molmil
Crystal Structure of M. tuberculosis ribokinase (Rv2436) in complex with ribose and AMP-PNP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RIBOKINASE RBSK, ...
Authors:Masters, E.I, Sun, Y, Wang, Y, Parker, W.B, Li, R.
Deposit date:2009-03-18
Release date:2010-03-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure and biochemical characterization of M.tuberculosis ribokinase (Rv2436)
To be Published
2IEN
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BU of 2ien by Molmil
Crystal structure analysis of HIV-1 protease with a potent non-peptide inhibitor (UIC-94017)
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, ACETIC ACID, CHLORIDE ION, ...
Authors:Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Manna, D, Hussain, A.K, Leshchenko, S, Ghosh, A.K, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2006-09-19
Release date:2006-10-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High Resolution Crystal Structures of HIV-1 Protease with a Potent Non-Peptide Inhibitor (Uic-94017) Active Against Multi-Drug-Resistant Clinical Strains.
J.Mol.Biol., 338, 2004
1BVE
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BU of 1bve by Molmil
HIV-1 PROTEASE-DMP323 COMPLEX IN SOLUTION, NMR, 28 STRUCTURES
Descriptor: HIV-1 PROTEASE, [4-R-(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO-5,6-BIS(HYDROXY)-[1,3-BIS([4-HYDROXYMETHYL-PHENYL]METHYL)-4,7-BIS(PHEN YLMETHYL)]-2H-1,3-DIAZEPINONE
Authors:Yamazaki, T, Hinck, A.P, Wang, Y.-X, Nicholson, L.K, Torchia, D.A, Wingfield, P, Stahl, S.J, Kaufman, J.D, Chang, C, Domaille, P.J, Lam, P.Y.S.
Deposit date:1996-01-16
Release date:1996-08-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the HIV-1 protease complexed with DMP323, a novel cyclic urea-type inhibitor, determined by nuclear magnetic resonance spectroscopy.
Protein Sci., 5, 1996
1BVG
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BU of 1bvg by Molmil
HIV-1 PROTEASE-DMP323 COMPLEX IN SOLUTION, NMR MINIMIZED AVERAGE STRUCTURE
Descriptor: HIV-1 PROTEASE, [4-R-(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO-5,6-BIS(HYDROXY)-[1,3-BIS([4-HYDROXYMETHYL-PHENYL]METHYL)-4,7-BIS(PHEN YLMETHYL)]-2H-1,3-DIAZEPINONE
Authors:Yamazaki, T, Hinck, A.P, Wang, Y.-X, Nicholson, L.K, Torchia, D.A, Wingfield, P, Stahl, S.J, Kaufman, J.D, Chang, C, Domaille, P.J, Lam, P.Y.S.
Deposit date:1996-01-16
Release date:1996-08-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the HIV-1 protease complexed with DMP323, a novel cyclic urea-type inhibitor, determined by nuclear magnetic resonance spectroscopy.
Protein Sci., 5, 1996
3S45
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BU of 3s45 by Molmil
wild-type HIV-2 protease with antiviral drug amprenavir
Descriptor: CHLORIDE ION, IMIDAZOLE, Protease, ...
Authors:Tie, Y.-F, Wang, Y.-F, Weber, I.T.
Deposit date:2011-05-18
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Critical differences in HIV-1 and HIV-2 protease specificity for clinical inhibitors.
Protein Sci., 21, 2012
3OE7
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BU of 3oe7 by Molmil
Structure of four mutant forms of yeast f1 ATPase: gamma-I270T
Descriptor: ATP synthase subunit alpha, ATP synthase subunit beta, ATP synthase subunit delta, ...
Authors:Arsenieva, D, Symersky, J, Wang, Y, Pagadala, V, Mueller, D.M.
Deposit date:2010-08-12
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Crystal structures of mutant forms of the yeast f1 ATPase reveal two modes of uncoupling.
J.Biol.Chem., 285, 2010
3OEE
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BU of 3oee by Molmil
Structure of four mutant forms of yeast F1 ATPase: alpha-F405S
Descriptor: ATP synthase subunit alpha, ATP synthase subunit beta, ATP synthase subunit delta, ...
Authors:Arsenieva, D, Symersky, J, Wang, Y, Pagadala, V, Mueller, D.M.
Deposit date:2010-08-12
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Structure of four mutant forms of yeast F1 ATPase: alpha-F405S
To be Published
3OFN
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BU of 3ofn by Molmil
Structure of four mutant forms of yeast F1 ATPase: alpha-N67I
Descriptor: ATP synthase subunit alpha, ATP synthase subunit beta, ATP synthase subunit delta, ...
Authors:Arsenieva, D, Symersky, J, Wang, Y, Pagadala, V, Mueller, D.M.
Deposit date:2010-08-15
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of mutant forms of the yeast f1 ATPase reveal two modes of uncoupling.
J.Biol.Chem., 285, 2010
5D8O
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BU of 5d8o by Molmil
1.90A resolution structure of BfrB (wild-type, C2221 form) from Pseudomonas aeruginosa
Descriptor: Ferroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Lovell, S, Battaile, K.P, Wang, Y, Yao, H, Rivera, M.
Deposit date:2015-08-17
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of the Bacterioferritin/Bacterioferritin Associated Ferredoxin Protein-Protein Interaction in Solution and Determination of Binding Energy Hot Spots.
Biochemistry, 54, 2015
2F96
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BU of 2f96 by Molmil
2.1 A crystal structure of Pseudomonas aeruginosa rnase T (Ribonuclease T)
Descriptor: MAGNESIUM ION, Ribonuclease T
Authors:Zheng, H, Chruszcz, M, Cymborowski, M, Wang, Y, Gorodichtchenskaia, E, Skarina, T, Guthrie, J, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-12-05
Release date:2006-02-14
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal Structure of RNase T, an Exoribonuclease Involved in tRNA Maturation and End Turnover.
Structure, 15, 2007
5D8P
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BU of 5d8p by Molmil
2.35A resolution structure of iron bound BfrB (wild-type, C2221 form) from Pseudomonas aeruginosa
Descriptor: ACETATE ION, FE (II) ION, Ferroxidase, ...
Authors:Lovell, S, Battaile, K.P, Wang, Y, Yao, H, Rivera, M.
Deposit date:2015-08-17
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Characterization of the Bacterioferritin/Bacterioferritin Associated Ferredoxin Protein-Protein Interaction in Solution and Determination of Binding Energy Hot Spots.
Biochemistry, 54, 2015
8WRB
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BU of 8wrb by Molmil
Lysophosphatidylserine receptor GPR34-Gi complex
Descriptor: Antibody fragment scFv16, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Gong, W, Liu, G, Li, X, Wang, Y, Zhang, X.
Deposit date:2023-10-13
Release date:2023-11-08
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Structural basis for ligand recognition and signaling of the lysophosphatidylserine receptors GPR34 and GPR174.
Plos Biol., 21, 2023
7WSB
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BU of 7wsb by Molmil
The ternary complex structure of FtmOx1 with a-ketoglutarate and 13-oxo-fumitremorgin B
Descriptor: 13-Oxofumitremorgin B, 2-OXOGLUTARIC ACID, COBALT (II) ION, ...
Authors:Wang, J, Wang, X.Y, Wang, Y.Y, Yan, W.P.
Deposit date:2022-01-28
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Dissecting the Mechanism of the Nonheme Iron Endoperoxidase FtmOx1 Using Substrate Analogues.
Jacs Au, 2, 2022
6DJ7
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BU of 6dj7 by Molmil
HIV-1 protease with mutation L76V in complex with GRL-5010 (gem-difluoro-bis-tetrahydrofuran as P2 ligand)
Descriptor: (3R,3aS,6aS)-4,4-difluorohexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-4-{[(4-aminophenyl)sulfonyl](2-methylpropyl)amino}-3-hydroxy-1-phenylbutan-2-yl]carbamate, ACETATE ION, CHLORIDE ION, ...
Authors:Wong-Sam, A.E, Wang, Y.F, Weber, I.T.
Deposit date:2018-05-24
Release date:2018-10-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Drug Resistance Mutation L76V Alters Nonpolar Interactions at the Flap-Core Interface of HIV-1 Protease.
ACS Omega, 3, 2018
6DXF
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BU of 6dxf by Molmil
Crystal structure of chalcone synthase from Selaginella moellendorffii - hydrogen peroxide treated
Descriptor: Chalcone synthase
Authors:Liou, G, Chiang, Y.C, Wang, Y, Weng, J.K.
Deposit date:2018-06-28
Release date:2018-10-17
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Mechanistic basis for the evolution of chalcone synthase catalytic cysteine reactivity in land plants.
J. Biol. Chem., 293, 2018
8WLL
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BU of 8wll by Molmil
Cryo-EM structure of human VMAT2 Y422C, in the presence of reserpine, determined in an inward-facing conformation
Descriptor: Synaptic vesicular amine transporter, reserpine
Authors:Qu, Q, Wang, Y, Zhou, Z.
Deposit date:2023-09-30
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:Cryo-EM structure of human VMAT2 Y422C, in the presence of reserpine, determined in an inward-facing conformation
To Be Published
8WLJ
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BU of 8wlj by Molmil
Cryo-EM structure of human apo VMAT2 with nanobody in an outward-facing conformation
Descriptor: Synaptic vesicular amine transporter, nanobody
Authors:Qu, Q, Wang, Y, Zhou, Z.
Deposit date:2023-09-30
Release date:2024-06-12
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of human apo VMAT2 in an outward-facing conformation
To Be Published
8WLK
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BU of 8wlk by Molmil
Cryo-EM structure of human VMAT2 in presence of Tetrabenazine, determined in an outward-facing conformation
Descriptor: (3S,5R,11bS)-9,10-dimethoxy-3-(2-methylpropyl)-1,3,4,6,7,11b-hexahydro-2H-pyrido[2,1-a]isoquinolin-2-one, Synaptic vesicular amine transporter
Authors:Qu, Q, Wang, Y, Zhou, Z.
Deposit date:2023-09-30
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Cryo-EM structure of human apo VMAT2 in an outward-facing conformation
To Be Published
8WLM
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BU of 8wlm by Molmil
Cryo-EM structure of human VMAT2 in presence of 5-HT, determined in an outward-facing conformation
Descriptor: SEROTONIN, Synaptic vesicular amine transporter
Authors:Qu, Q, Wang, Y, Zhou, Z.
Deposit date:2023-09-30
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Cryo-EM structure of human VMAT2 in presence of 5-HT in an outward-facing conformation
To Be Published
5D8Y
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BU of 5d8y by Molmil
2.05A resolution structure of iron bound BfrB (L68A E81A) from Pseudomonas aeruginosa
Descriptor: ACETATE ION, FE (II) ION, Ferroxidase, ...
Authors:Lovell, S, Battaile, K.P, Wang, Y, Yao, H, Rivera, M.
Deposit date:2015-08-18
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Characterization of the Bacterioferritin/Bacterioferritin Associated Ferredoxin Protein-Protein Interaction in Solution and Determination of Binding Energy Hot Spots.
Biochemistry, 54, 2015
5D8Q
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BU of 5d8q by Molmil
2.20A resolution structure of BfrB (L68A) from Pseudomonas aeruginosa
Descriptor: ARSENIC, Ferroxidase, MAGNESIUM ION, ...
Authors:Lovell, S, Battaile, K.P, Wang, Y, Yao, H, Rivera, M.
Deposit date:2015-08-17
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Characterization of the Bacterioferritin/Bacterioferritin Associated Ferredoxin Protein-Protein Interaction in Solution and Determination of Binding Energy Hot Spots.
Biochemistry, 54, 2015
6O20
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BU of 6o20 by Molmil
Cryo-EM structure of TRPV5 with calmodulin bound
Descriptor: CALCIUM ION, Calmodulin, Transient receptor potential cation channel subfamily V member 5
Authors:Dang, S, van Goor, M.K, Asarnow, D, Wang, Y, Julius, D, Cheng, Y, van der Wijst, J.
Deposit date:2019-02-22
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insight into TRPV5 channel function and modulation.
Proc.Natl.Acad.Sci.USA, 116, 2019

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