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PDB: 12929 results

5YJD
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Structural insights into the CRISPR-Cas-associated ribonuclease activity of Staphylococcus epidermidis Csm3
Descriptor: CALCIUM ION, Csm3
Authors:Zhao, Y.Q, Gu, Y.J, Zhu, X.F, Cheng, W.
Deposit date:2017-10-10
Release date:2018-10-17
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural insights into the CRISPR-Cas-associated ribonuclease activity of Staphylococcus epidermidis Csm3 and Csm6
To Be Published
5UED
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BU of 5ued by Molmil
RNA primer-template complex with guanosine dinucleotide ligand G(5')pp(5')G
Descriptor: RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3'), [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Zhang, W, Tam, C.P, Szostak, J.W.
Deposit date:2017-01-01
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Insight into the mechanism of nonenzymatic RNA primer extension from the structure of an RNA-GpppG complex.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4NPL
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BU of 4npl by Molmil
Crystal structure of Zebrafish ALKBH5 in complex with alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, MANGANESE (II) ION, RNA demethylase ALKBH5
Authors:He, C, Chen, W, Zhang, L.
Deposit date:2013-11-21
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Crystal structure of the RNA demethylase ALKBH5 from zebrafish.
Febs Lett., 588, 2014
3OUF
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BU of 3ouf by Molmil
Structure of a K+ selective NaK mutant
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein
Authors:Derebe, M.G, Sauer, D.B, Zeng, W, Alam, A, Shi, N, Jiang, Y.
Deposit date:2010-09-14
Release date:2011-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Tuning the ion selectivity of tetrameric cation channels by changing the number of ion binding sites.
Proc.Natl.Acad.Sci.USA, 108, 2011
5Y1Z
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BU of 5y1z by Molmil
Crystal structure of ZMYND8 PHD-BROMO-PWWP tandem in complex with Drebrin ADF-H domain
Descriptor: Drebrin, GLYCEROL, Protein kinase C-binding protein 1, ...
Authors:Yao, N, Li, J, Liu, H, Wan, J, Liu, W, Zhang, M.
Deposit date:2017-07-22
Release date:2017-10-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.676 Å)
Cite:The Structure of the ZMYND8/Drebrin Complex Suggests a Cytoplasmic Sequestering Mechanism of ZMYND8 by Drebrin
Structure, 25, 2017
4A5N
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BU of 4a5n by Molmil
Redoxregulator HypR in its reduced form
Descriptor: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, UNCHARACTERIZED HTH-TYPE TRANSCRIPTIONAL REGULATOR YYBR
Authors:Palm, G.J, Waack, P, Read, R.J, Hinrichs, W.
Deposit date:2011-10-26
Release date:2012-01-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural Insights Into the Redox-Switch Mechanism of the Marr/Duf24-Type Regulator Hypr
Nucleic Acids Res., 40, 2012
4V06
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BU of 4v06 by Molmil
Crystal structure of human tryptophan hydroxylase 2 (TPH2), catalytic domain
Descriptor: FE (III) ION, IMIDAZOLE, TRYPTOPHAN 5-HYDROXYLASE 2
Authors:Kopec, J, Oberholzer, A, Fitzpatrick, F, Newman, J, Tallant, C, Kiyani, W, Shrestha, L, Burgess-Brown, N, von Delft, F, Arrowsmith, C, Edwards, A, Bountra, C, Yue, W.W.
Deposit date:2014-09-11
Release date:2014-10-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Crystal Structure of Human Tryptophane Hydroxylase 2 (Tph2), Catalytic Domain
To be Published
5UBL
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BU of 5ubl by Molmil
A circularly permuted version of PvdQ (cpPvdQ)
Descriptor: Acyl-homoserine lactone acylase PvdQ
Authors:Wu, R, Mascarenhas, R, Catlin, D, Clevenger, K, Fast, W, Liu, D.
Deposit date:2016-12-20
Release date:2017-03-01
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Circular Permutation Reveals a Chromophore Precursor Binding Pocket of the Siderophore Tailoring Enzyme PvdQ
To Be Published
1N95
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BU of 1n95 by Molmil
Aryl Tetrahydrophyridine Inhbitors of Farnesyltranferase: Glycine, Phenylalanine and Histidine Derivatives
Descriptor: 1-[2-(4-CYANO-BENZYLAMINO)-3-(3-METHYL-3H-IMIDAZOL-4-YL)-PROPIONYL]-5-NAPHTHALEN-1-YL-1,2,3,6-TETRAHYDRO-PYRIDINE-4-CARBONITRILE, ALPHA-HYDROXYFARNESYLPHOSPHONIC ACID, Protein farnesyltransferase alpha subunit, ...
Authors:Gwaltney II, S.L, O'Conner, S.J, Nelson, L.T, Sullivan, G.M, Imade, H, Wang, W, Hasvold, L, Li, Q, Cohen, J, Gu, W.Z.
Deposit date:2002-11-22
Release date:2003-01-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Aryl tetrahydropyridine inhibitors of farnesyltransferase: glycine, phenylalanine and histidine derivatives.
Bioorg.Med.Chem.Lett., 13, 2003
1NI1
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BU of 1ni1 by Molmil
Imidazole and cyanophenyl farnesyl transferase inhibitors
Descriptor: 2-CHLORO-5-(3-CHLORO-PHENYL)-6-[(4-CYANO-PHENYL)-(3-METHYL-3H-IMIDAZOL-4-YL)- METHOXYMETHYL]-NICOTINONITRILE, ALPHA-HYDROXYFARNESYLPHOSPHONIC ACID, Protein farnesyltransferase alpha subunit, ...
Authors:Tong, Y, Lin, N.H, Wang, L, Hasvold, L, Wang, W, Leonard, N, Li, T, Li, Q, Cohen, J, Gu, W.Z, Zhang, H, Stoll, V, Bauch, J, Marsh, K, Rosenberg, S.H, Sham, H.L.
Deposit date:2002-12-20
Release date:2004-04-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of potent imidazole and cyanophenyl containing farnesyltransferase inhibitors with improved oral bioavailability.
Bioorg.Med.Chem.Lett., 13, 2003
4AP8
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BU of 4ap8 by Molmil
Crystal structure of human Molybdopterin synthase catalytic subunit (MOCS2B)
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, MOLYBDOPTERIN SYNTHASE CATALYTIC SUBUNIT
Authors:Vollmar, M, Kiyani, W, Krojer, T, Goubin, S, Allerston, C, Froese, D.S, von Delft, F, Burgess-Brown, N, Bountra, C, Arrowsmith, C.H, Edwards, A, Yue, W.W.
Deposit date:2012-03-30
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Crystal Structure of Human Molybdopterin Synthase Catalytic Subunit (Mocs2B)
To be Published
5Y6R
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BU of 5y6r by Molmil
Crystal structure of CSFV NS5B
Descriptor: GLYCEROL, Genome polyprotein, SULFATE ION
Authors:Li, W, Wu, B.
Deposit date:2017-08-13
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Crystal Structure of Classical Swine Fever Virus NS5B Reveals a Novel N-Terminal Domain
J. Virol., 92, 2018
3P1W
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BU of 3p1w by Molmil
Crystal Structure of RAB GDI from Plasmodium Falciparum, PFL2060c
Descriptor: RabGDI protein
Authors:Wernimont, A.K, Neculai, A.M, Weadge, J, MacKenzie, F, Cossar, D, Tempel, W, Bochkarev, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Langsley, G, Bosch, J, Hui, R, Pizzaro, J.C, Hutchinson, A, Structural Genomics Consortium (SGC)
Deposit date:2010-09-30
Release date:2010-12-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of RAB GDI from Plasmodium Falciparum, PFL2060c
To be published
5UFL
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BU of 5ufl by Molmil
Crystal structure of a CIP2A core domain
Descriptor: Protein CIP2A, ZINC ION
Authors:Wang, Z, Wang, J, Rao, Z, Xu, W.
Deposit date:2017-01-04
Release date:2017-02-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Oncoprotein CIP2A is stabilized via interaction with tumor suppressor PP2A/B56.
EMBO Rep., 18, 2017
5YAC
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BU of 5yac by Molmil
Crystal structure of WT Trm5b from Pyrococcus abyssi
Descriptor: tRNA (guanine(37)-N1)-methyltransferase Trm5b
Authors:Xie, W, Wu, J.
Deposit date:2017-08-31
Release date:2017-09-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The crystal structure of the Pyrococcus abyssi mono-functional methyltransferase PaTrm5b
Biochem. Biophys. Res. Commun., 493, 2017
5UHG
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BU of 5uhg by Molmil
Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-AAP1 and Rifampin
Descriptor: DNA (5'-D(*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*CP*AP*GP*G)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Lin, W, Das, K, Feng, Y, Ebright, R.H.
Deposit date:2017-01-11
Release date:2017-04-12
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.971 Å)
Cite:Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition.
Mol. Cell, 66, 2017
3P1J
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BU of 3p1j by Molmil
Crystal structure of human GTPase IMAP family member 2 in the nucleotide-free state
Descriptor: GTPase IMAP family member 2, UNKNOWN ATOM OR ION
Authors:Shen, L, Tempel, W, Tong, Y, Guan, X, Nedyalkova, L, Wernimont, A.K, Mackenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Andrews, D.W, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2010-09-30
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of human GTPase IMAP family member 2 in the nucleotide-free state
to be published
4B80
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BU of 4b80 by Molmil
Mus musculus Acetylcholinesterase in complex with N-(2-Diethylamino-ethyl)-1-(4-fluoro-phenyl)-methanesulfonamide
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, ...
Authors:Andersson, C.D, Forsgren, N, Akfur, C, Allgardsson, A, Berg, L, Qian, W, Ekstrom, F, Linusson, A.
Deposit date:2012-08-24
Release date:2013-09-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Divergent structure-activity relationships of structurally similar acetylcholinesterase inhibitors.
J. Med. Chem., 56, 2013
5UGU
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BU of 5ugu by Molmil
Crystal structure of M. tuberculosis InhA inhibited by PT506
Descriptor: 2-[4-[(4-cyclopropyl-1,2,3-triazol-1-yl)methyl]-2-oxidanyl-phenoxy]benzenecarbonitrile, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Eltschkner, S, Pschibul, A, Spagnuolo, L.A, Yu, W, Tonge, P.J, Kisker, C.
Deposit date:2017-01-10
Release date:2017-02-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Evaluating the Contribution of Transition-State Destabilization to Changes in the Residence Time of Triazole-Based InhA Inhibitors.
J. Am. Chem. Soc., 139, 2017
5UH6
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BU of 5uh6 by Molmil
Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntRNA in complex with Rifampin
Descriptor: DNA (5'-D(*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*CP*AP*GP*G)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Lin, W, Das, K, Feng, Y, Ebright, R.H.
Deposit date:2017-01-11
Release date:2017-04-12
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.837 Å)
Cite:Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition.
Mol. Cell, 66, 2017
5YAY
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BU of 5yay by Molmil
Crystal structure of KANK1/KIF21A complex
Descriptor: KN motif and ankyrin repeat domains 1, Kinesin-like protein KIF21A
Authors:Wei, Z, Pan, W.
Deposit date:2017-09-02
Release date:2017-12-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural insights into ankyrin repeat-mediated recognition of the kinesin motor protein KIF21A by KANK1, a scaffold protein in focal adhesion.
J. Biol. Chem., 293, 2018
1L1R
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BU of 1l1r by Molmil
Crystal Structure of APRTase from Giardia lamblia Complexed with 9-deazaadenine, Mg2+ and PRPP
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, 9-DEAZAADENINE, Adenine phosphoribosyltransferase, ...
Authors:Shi, W, Sarver, A.E, Wang, C.C, Tanaka, K.S, Almo, S.C, Schramm, V.L.
Deposit date:2002-02-19
Release date:2002-11-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Closed Site Complexes of Adenine Phosphoribosyltransferase from Giardia lamblia Reveal a Mechanism of Ribosyl Migration.
J.Biol.Chem., 277, 2002
1L3X
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BU of 1l3x by Molmil
Solution Structure of Novel Disintegrin Salmosin
Descriptor: platelet aggregation inhibitor disintegrin
Authors:Shin, J, Lee, W.
Deposit date:2002-03-01
Release date:2003-12-23
Last modified:2012-11-21
Method:SOLUTION NMR
Cite:Solution structure of a novel disintegrin, salmosin, from Agkistrondon halys venom
Biochemistry, 42, 2003
5Y9K
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BU of 5y9k by Molmil
Structure of the belimumab Fab fragment
Descriptor: belimumab heavy chain, belimumab light chain
Authors:Heo, Y.-S, Shin, W.
Deposit date:2017-08-25
Release date:2018-02-21
Last modified:2019-09-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:BAFF-neutralizing interaction of belimumab related to its therapeutic efficacy for treating systemic lupus erythematosus.
Nat Commun, 9, 2018
5UEE
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BU of 5uee by Molmil
RNA primer-template complex with guanosine dinucleotide ligand G(5')ppp(5')G
Descriptor: DIGUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')
Authors:Zhang, W, Tam, C.P, Szostak, J.W.
Deposit date:2017-01-01
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insight into the mechanism of nonenzymatic RNA primer extension from the structure of an RNA-GpppG complex.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

223532

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