Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12895 results

5HEK
DownloadVisualize
BU of 5hek by Molmil
crystal structure of M1.HpyAVI
Descriptor: Adenine specific DNA methyltransferase (DpnA)
Authors:Ma, B, Zhang, H, Liu, W.
Deposit date:2016-01-06
Release date:2016-11-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Biochemical and structural characterization of a DNA N6-adenine methyltransferase from Helicobacter pylori
Oncotarget, 7, 2016
1AFR
DownloadVisualize
BU of 1afr by Molmil
STEAROYL-ACYL CARRIER PROTEIN DESATURASE FROM CASTOR SEEDS
Descriptor: DELTA9 STEAROYL-ACYL CARRIER PROTEIN DESATURASE, FE (II) ION
Authors:Lindqvist, Y, Huang, W, Schneider, G.
Deposit date:1997-03-13
Release date:1997-05-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of delta9 stearoyl-acyl carrier protein desaturase from castor seed and its relationship to other di-iron proteins.
EMBO J., 15, 1996
5HJK
DownloadVisualize
BU of 5hjk by Molmil
Crystal Structure of Pyrococcus abyssi Trm5a complexed with SAH
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (guanine(37)-N1)-methyltransferase Trm5a
Authors:Xie, W, Wang, C, Jia, Q.
Deposit date:2016-01-13
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the bifunctional tRNA methyltransferase Trm5a
Sci Rep, 6, 2016
2DGC
DownloadVisualize
BU of 2dgc by Molmil
GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DNA
Descriptor: DNA (5'-D(*TP*GP*GP*AP*GP*AP*TP*GP*AP*CP*GP*TP*CP*AP*TP*CP*T P*CP*C)-3'), PROTEIN (GCN4)
Authors:Keller, W, Koenig, P, Richmond, T.J.
Deposit date:1995-09-28
Release date:1996-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a bZIP/DNA complex at 2.2 A: determinants of DNA specific recognition.
J.Mol.Biol., 254, 1995
2RJQ
DownloadVisualize
BU of 2rjq by Molmil
Crystal structure of ADAMTS5 with inhibitor bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(N-HYDROXYAMINO)-2R-ISOBUTYL-2S-(2-THIENYLTHIOMETHYL)SUCCINYL-L-PHENYLALANINE-N-METHYLAMIDE, ADAMTS-5, ...
Authors:Mosyak, L, Stahl, M, Somers, W.
Deposit date:2007-10-15
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of the two major aggrecan degrading enzymes, ADAMTS4 and ADAMTS5.
Protein Sci., 17, 2008
2RK4
DownloadVisualize
BU of 2rk4 by Molmil
Structure of M26I DJ-1
Descriptor: Protein DJ-1
Authors:Lakshminarasimhan, M, Maldonado, M.T, Zhou, W, Fink, A.L, Wilson, M.A.
Deposit date:2007-10-16
Release date:2008-01-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structural Impact of Three Parkinsonism-Associated Missense Mutations on Human DJ-1.
Biochemistry, 47, 2008
7RR7
DownloadVisualize
BU of 7rr7 by Molmil
Multidrug efflux pump subunit AcrB
Descriptor: DODECANE, Multidrug efflux pump subunit AcrB, PHOSPHATIDYLETHANOLAMINE
Authors:Trinh, T.K.H, Cabezas, A, Catalano, C, Qiu, W, des Georges, A, Guo, Y.
Deposit date:2021-08-09
Release date:2022-08-17
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Multidrug efflux pump subunit AcrB
To Be Published
7RR8
DownloadVisualize
BU of 7rr8 by Molmil
Multidrug efflux pump subunit AcrB
Descriptor: DODECANE, Multidrug efflux pump subunit AcrB, PHOSPHATIDYLETHANOLAMINE
Authors:Trinh, T.K.H, Cabezas, A, Catalano, C, Qiu, W, des Georges, A, Guo, Y.
Deposit date:2021-08-09
Release date:2022-08-17
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.51 Å)
Cite:Multidrug efflux pump subunit AcrB
To Be Published
5HJM
DownloadVisualize
BU of 5hjm by Molmil
Crystal Structure of Pyrococcus abyssi Trm5a complexed with MTA
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, ACETATE ION, HOMOSERINE LACTONE, ...
Authors:Xie, W, Wang, C, Jia, Q.
Deposit date:2016-01-13
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.762 Å)
Cite:Crystal structures of the bifunctional tRNA methyltransferase Trm5a
Sci Rep, 6, 2016
5HJQ
DownloadVisualize
BU of 5hjq by Molmil
Crystal structure of the TBC domain of Skywalker/TBC1D24 from Drosophila melanogaster in complex with inositol(1,4,5)triphosphate
Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, LD10117p
Authors:Fischer, B, Paesmans, J, Versees, W.
Deposit date:2016-01-13
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Skywalker-TBC1D24 has a lipid-binding pocket mutated in epilepsy and required for synaptic function.
Nat.Struct.Mol.Biol., 23, 2016
7RR6
DownloadVisualize
BU of 7rr6 by Molmil
Multidrug efflux pump subunit AcrB
Descriptor: DODECANE, Multidrug efflux pump subunit AcrB, PHOSPHATIDYLETHANOLAMINE
Authors:Trinh, T.K.H, Cabezas, A, Catalano, C, Qiu, W, des Georges, A, Guo, Y.
Deposit date:2021-08-09
Release date:2022-08-17
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Multidrug efflux pump subunit AcrB
To Be Published
2DIV
DownloadVisualize
BU of 2div by Molmil
Solution structure of the RRM domain of TRNA selenocysteine associated protein
Descriptor: TRNA selenocysteine associated protein
Authors:Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-30
Release date:2006-09-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RRM domain of TRNA selenocysteine associated protein
To be Published
1A9B
DownloadVisualize
BU of 1a9b by Molmil
DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS
Descriptor: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 B*3501 (ALPHA CHAIN), ...
Authors:Menssen, R, Orth, P, Ziegler, A, Saenger, W.
Deposit date:1998-04-03
Release date:1998-10-21
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Decamer-like conformation of a nona-peptide bound to HLA-B*3501 due to non-standard positioning of the C terminus.
J.Mol.Biol., 285, 1999
7R3H
DownloadVisualize
BU of 7r3h by Molmil
PROSS optimitzed variant of RhlR (75 mutations) in complex with native autoinducer C4-HSL
Descriptor: N-[(3S)-2-oxotetrahydrofuran-3-yl]butanamide, PROSS optimized variant of RhlR with 75 mutations
Authors:Henke, S, Blankenfeldt, W.
Deposit date:2022-02-07
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Moonlighting chaperone activity of the enzyme PqsE contributes to RhlR-controlled virulence of Pseudomonas aeruginosa.
Nat Commun, 13, 2022
7R3E
DownloadVisualize
BU of 7r3e by Molmil
Fusion construct of PqsE and RhlR in complex with the synthetic antagonist mBTL
Descriptor: 2-aminobenzoylacetyl-CoA thioesterase,Regulatory protein RhlR, 4-(3-bromophenoxy)-N-[(3S)-2-oxothiolan-3-yl]butanamide, FE (III) ION
Authors:Borgert, S.R, Schmelz, S, Blankenfeldt, W.
Deposit date:2022-02-07
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.46 Å)
Cite:Moonlighting chaperone activity of the enzyme PqsE contributes to RhlR-controlled virulence of Pseudomonas aeruginosa.
Nat Commun, 13, 2022
7R3J
DownloadVisualize
BU of 7r3j by Molmil
Nativ complex of PqsE and RhlR with the synthetic antagonist mBTL
Descriptor: 2-aminobenzoylacetyl-CoA thioesterase, 4-(3-bromophenoxy)-N-[(3S)-2-oxothiolan-3-yl]butanamide, FE (III) ION, ...
Authors:Borgert, S.R, Schmelz, S, Blankenfeldt, W.
Deposit date:2022-02-07
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Moonlighting chaperone activity of the enzyme PqsE contributes to RhlR-controlled virulence of Pseudomonas aeruginosa.
Nat Commun, 13, 2022
7R3G
DownloadVisualize
BU of 7r3g by Molmil
PROSS optimitzed variant of RhlR (75 mutations) in complex with the synthetic antagonist mBTL
Descriptor: 4-(3-bromophenoxy)-N-[(3S)-2-oxothiolan-3-yl]butanamide, Regulatory protein RhlR
Authors:Henke, S, Blankenfeldt, W.
Deposit date:2022-02-07
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Moonlighting chaperone activity of the enzyme PqsE contributes to RhlR-controlled virulence of Pseudomonas aeruginosa.
Nat Commun, 13, 2022
2R52
DownloadVisualize
BU of 2r52 by Molmil
Crystal structure analysis of Bone Morphogenetic Protein-6 (BMP-6)
Descriptor: Bone morphogenetic protein 6, ISOPROPYL ALCOHOL
Authors:Mueller, T.D, Sebald, W, Saremba, S.
Deposit date:2007-09-03
Release date:2008-01-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Type I receptor binding of bone morphogenetic protein 6 is dependent on N-glycosylation of the ligand.
Febs J., 275, 2007
7R3F
DownloadVisualize
BU of 7r3f by Molmil
Monomeric PqsE mutant E187R
Descriptor: 2-aminobenzoylacetyl-CoA thioesterase, BENZOIC ACID, CACODYLATE ION, ...
Authors:Borgert, S.R, Schmelz, S, Blankenfeldt, W.
Deposit date:2022-02-07
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Moonlighting chaperone activity of the enzyme PqsE contributes to RhlR-controlled virulence of Pseudomonas aeruginosa.
Nat Commun, 13, 2022
7R3I
DownloadVisualize
BU of 7r3i by Molmil
PROSS optimitzed variant of RhlR (61 mutations) in complex with the synthetic antagonist mBTL
Descriptor: 4-(3-bromophenoxy)-N-[(3S)-2-oxothiolan-3-yl]butanamide, PROSS optimized variant of RhlR with 61 mutations
Authors:Henke, S, Blankenfeldt, W.
Deposit date:2022-02-07
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Moonlighting chaperone activity of the enzyme PqsE contributes to RhlR-controlled virulence of Pseudomonas aeruginosa.
Nat Commun, 13, 2022
4WUM
DownloadVisualize
BU of 4wum by Molmil
X-ray crystal structure of Chalcone Synthase from Freesia hybrida
Descriptor: Chalcone synthase
Authors:Almqvist, J, Jiang, W.S, Wang, L, Huang, Y.
Deposit date:2014-11-02
Release date:2014-11-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Molecular and Biochemical Analysis of Chalcone Synthase from Freesia hybrid in Flavonoid Biosynthetic Pathway.
Plos One, 10, 2015
2DNU
DownloadVisualize
BU of 2dnu by Molmil
Solution structure of RSGI RUH-061, a SH3 domain from human
Descriptor: SH3 multiple domains 1
Authors:Ohashi, W, Hirota, H, Nagashima, T, Kurosaki, C, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-26
Release date:2006-10-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RSGI RUH-061, a SH3 domain from human
to be published
2R9G
DownloadVisualize
BU of 2r9g by Molmil
Crystal structure of the C-terminal fragment of AAA ATPase from Enterococcus faecium
Descriptor: AAA ATPase, central region, ACETATE ION, ...
Authors:Ramagopal, U.A, Patskovsky, Y, Bonanno, J.B, Shi, W, Toro, R, Meyer, A.J, Rutter, M, Wu, B, Groshong, C, Gheyi, T, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-09-12
Release date:2007-10-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal Structure of the C-Terminal Domain of AAA ATPase from Enterococcus faecium.
To be Published
5KH9
DownloadVisualize
BU of 5kh9 by Molmil
Crystal structure of a low occupancy fragment candidate (5-[(4-Isopropylphenyl)amino]-6-methyl-1,2,4-triazin-3(2H)-one) bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
Descriptor: 6-methyl-5-[(4-propan-2-ylphenyl)amino]-2~{H}-1,2,4-triazin-3-one, FORMIC ACID, Histone deacetylase 6, ...
Authors:Harding, R.J, Tempel, W, Ravichandran, M, Collins, P, Pearce, N, Brandao-Neto, J, Douangamath, A, Schapira, M, Bountra, C, Edwards, A.M, von Delft, F, Santhakumar, V, Arrowsmith, C.M, Structural Genomics Consortium (SGC)
Deposit date:2016-06-14
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Small Molecule Antagonists of the Interaction between the Histone Deacetylase 6 Zinc-Finger Domain and Ubiquitin.
J. Med. Chem., 60, 2017
1A4T
DownloadVisualize
BU of 1a4t by Molmil
SOLUTION STRUCTURE OF PHAGE P22 N PEPTIDE-BOX B RNA COMPLEX, NMR, 20 STRUCTURES
Descriptor: 20-MER BASIC PEPTIDE, BOXB RNA
Authors:Cai, Z, Gorin, A.A, Frederick, R, Ye, X, Hu, W, Majumdar, A, Kettani, A, Patel, D.J.
Deposit date:1998-02-04
Release date:1998-04-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of P22 transcriptional antitermination N peptide-boxB RNA complex.
Nat.Struct.Biol., 5, 1998

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon