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PDB: 12929 件

5VNI
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Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal FA sorting motif
分子名称: C-terminal FA, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
著者Ma, W, Goldberg, J.
登録日2017-04-30
公開日2017-07-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.788 Å)
主引用文献ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife, 6, 2017
4P8V
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The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc2) were solved to resolutions of 1.5 angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3-like protein 2, SULFATE ION
著者Suginta, W, Ranok, A, Robinson, R.C, Wongsantichon, J.
登録日2014-04-01
公開日2014-12-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structural and Thermodynamic Insights into Chitooligosaccharide Binding to Human Cartilage Chitinase 3-like Protein 2 (CHI3L2 or YKL-39).
J.Biol.Chem., 290, 2015
4AQA
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CRYSTAL STRUCTURE OF DEAFNESS ASSOCIATED MUTANT MOUSE CADHERIN-23 EC1- 2D124G AND PROTOCADHERIN-15 EC1-2 FORM I
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CADHERIN-23, CALCIUM ION, ...
著者Sotomayor, M, Weihofen, W, Gaudet, R, Corey, D.P.
登録日2012-04-15
公開日2012-11-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structure of a Force-Conveying Cadherin Bond Essential for Inner-Ear Mechanotransduction
Nature, 492, 2012
7CKW
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Cryo-EM structure of Fenoldopam bound dopamine receptor DRD1-Gs signaling complex
分子名称: (1R)-6-chloranyl-1-(4-hydroxyphenyl)-2,3,4,5-tetrahydro-1H-3-benzazepine-7,8-diol, CHOLESTEROL, D(1A) dopamine receptor, ...
著者Yan, W, Shao, W.
登録日2020-07-20
公開日2021-03-03
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Ligand recognition and allosteric regulation of DRD1-Gs signaling complexes.
Cell, 184, 2021
1L7L
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Crystal structure of Pseudomonas aeruginosa lectin 1 determined by single wavelength anomalous scattering phasing method
分子名称: CALCIUM ION, PA-I galactophilic lectin
著者Liu, Z.J, Tempel, W, Lin, D, Karaveg, K, Doyle, R.J, Rose, J.P, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2002-03-15
公開日2002-12-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure determination of P. aeruginosa lectin-1 using single wavelength anomalous scattering data from native crystals (P028)
AM.CRYST.ASSOC.,ABSTR.PAPERS (ANNUAL MEETING), 29, 2002
5W1E
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PobR in complex with PHB
分子名称: GLYCEROL, P-HYDROXYBENZOIC ACID, Putative transcriptional regulator, ...
著者Page, R, Peti, W, Lord, D.M, Bajaj, R, Zhang, R.
登録日2017-06-02
公開日2017-12-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献A peculiar IclR family transcription factor regulates para-hydroxybenzoate catabolism in Streptomyces coelicolor.
Nucleic Acids Res., 46, 2018
3P7J
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Drosophila HP1a chromo shadow domain
分子名称: GLYCEROL, Heterochromatin protein 1
著者Kim, D, Chruszcz, M, Minor, W, Khorasanizadeh, S.
登録日2010-10-12
公開日2011-02-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The HP1a Disordered C Terminus and Chromo Shadow Domain Cooperate to Select Target Peptide Partners.
Chembiochem, 12, 2011
5W1J
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Echinococcus granulosus thioredoxin glutathione reductas (egTGR)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin glutathione reductase
著者Gao, W, Wang, Y, Dai, S.
登録日2017-06-03
公開日2017-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The Enzymatic and Structural Basis for Inhibition of Echinococcus granulosus Thioredoxin Glutathione Reductase by Gold(I).
Antioxid. Redox Signal., 27, 2017
4B5X
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Crystal structures of divalent metal dependent pyruvate aldolase (HpaI), mutant D42A
分子名称: 4-HYDROXY-2-OXO-HEPTANE-1,7-DIOATE ALDOLASE, GLYCEROL, PHOSPHATE ION
著者Coincon, M, Wang, W, Seah, S.Y.K, Sygusch, J.
登録日2012-08-07
公開日2012-08-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Reaction Intermediates in Pyruvate Class II Aldolase: Substrate Cleavage, Enolate Stabilization and Substrate Specificity
J.Biol.Chem., 287, 2012
4BCZ
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Monomeric Human Cu,Zn Superoxide dismutase, loops IV and VII deleted, apo form.
分子名称: SUPEROXIDE DISMUTASE [CU-ZN]
著者Saraboji, K, Awad, W, Danielsson, J, Lang, L, Kurnik, M, Marklund, S.L, Oliveberg, M, Logan, D.T.
登録日2012-10-03
公開日2013-02-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Global Structural Motions from the Strain of a Single Hydrogen Bond.
Proc.Natl.Acad.Sci.USA, 110, 2013
4PIW
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Crystal structure of sugar aminotransferase WecE from Escherichia coli K-12
分子名称: TDP-4-keto-6-deoxy-D-glucose transaminase family protein
著者Wang, F, Xu, W, Helmich, K.E, Singh, S, Yennamalli, R.M, Miller, M.D, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2014-05-09
公開日2014-07-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of sugar aminotransferase WecE from Escherichia coli K-12
To Be Published
1L1Q
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Crystal Structure of APRTase from Giardia lamblia Complexed with 9-deazaadenine
分子名称: 9-DEAZAADENINE, Adenine phosphoribosyltransferase, SULFATE ION
著者Shi, W, Sarver, A.E, Wang, C.C, Tanaka, K.S, Almo, S.C, Schramm, V.L.
登録日2002-02-19
公開日2002-11-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Closed Site Complexes of Adenine Phosphoribosyltransferase from Giardia lamblia Reveal a Mechanism of Ribosyl Migration.
J.Biol.Chem., 277, 2002
5Z1Q
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Crystal structures of the trimeric N-terminal domain of Ciliate Euplotes octocarinatus Centrin
分子名称: CALCIUM ION, CHLORIDE ION, Centrin protein
著者Wang, W, Zhao, Y, Yang, B, Wang, H.
登録日2017-12-27
公開日2018-04-25
最終更新日2018-06-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the trimeric N-terminal domain of ciliate Euplotes octocarinatus centrin binding with calcium ions
Protein Sci., 27, 2018
1L2N
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Smt3 Solution Structure
分子名称: Ubiquitin-like protein SMT3
著者Sheng, W, Liao, X.
登録日2002-02-22
公開日2002-03-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a yeast ubiquitin-like protein Smt3: the role of structurally less defined sequences in protein-protein recognitions.
Protein Sci., 11, 2002
5VNJ
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Crystal structure of Sec23a/Sec24a/Sec22 complexed with a C-terminal FF sorting motif (ERGIC-53)
分子名称: C-terminal FF Ergic-53, Protein transport protein Sec23A, Protein transport protein Sec24A, ...
著者Ma, W, Goldberg, J.
登録日2017-04-30
公開日2017-07-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.806 Å)
主引用文献ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife, 6, 2017
1LKX
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MOTOR DOMAIN OF MYOE, A CLASS-I MYOSIN
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MYOSIN IE HEAVY CHAIN, ...
著者Kollmar, M, Durrwang, U, Kliche, W, Manstein, D.J, Kull, F.J.
登録日2002-04-26
公開日2002-06-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of the motor domain of a class-I myosin.
EMBO J., 21, 2002
4BAC
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BU of 4bac by Molmil
prototype foamy virus strand transfer complexes on product DNA
分子名称: 5'-D(*AP*GP*GP*AP*GP*CP*CP*AP*AP*GP*AP*CP*GP*GP *AP*TP*CP)-3', 5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP *TP*TP*GP*TP*AP)-3', DNA (38-MER), ...
著者Yin, Z, Lapkouski, M, Yang, W, Craigie, R.
登録日2012-09-12
公開日2012-10-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.263 Å)
主引用文献Assembly of Prototype Foamy Virus Strand Transfer Complexes on Product DNA Bypassing Catalysis of Integration.
Protein Sci., 21, 2012
4P8X
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The crystal structures of YKL-39 in the presence of chitooligosaccharides (GlcNAc6) were solved to resolutions of 2.48 angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3-like protein 2, SULFATE ION
著者Suginta, W, Ranok, A, Robinson, R.C, Wongsantichon, J.
登録日2014-04-01
公開日2014-12-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural and Thermodynamic Insights into Chitooligosaccharide Binding to Human Cartilage Chitinase 3-like Protein 2 (CHI3L2 or YKL-39).
J.Biol.Chem., 290, 2015
5Z9Y
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Crystal structure of Mycobacterium tuberculosis thiazole synthase (ThiG) complexed with DXP
分子名称: 1-DEOXY-D-XYLULOSE-5-PHOSPHATE, Thiazole synthase
著者Zhang, J, Zhang, B, Zhao, Y, Yang, X, Huang, M, Cui, P, Zhang, W, Li, J, Zhang, Y.
登録日2018-02-05
公開日2018-04-11
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Snapshots of catalysis: Structure of covalently bound substrate trapped in Mycobacterium tuberculosis thiazole synthase (ThiG).
Biochem. Biophys. Res. Commun., 497, 2018
5ZBS
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Crystal Structure of Kinesin-3 KIF13B motor Y73C mutant
分子名称: Kinesin family member 13B, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Ren, J.Q, Wang, S, Feng, W.
登録日2018-02-12
公開日2018-05-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.203 Å)
主引用文献Structural Delineation of the Neck Linker of Kinesin-3 for Processive Movement.
J. Mol. Biol., 430, 2018
5ZC9
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Crystal structure of the human eIF4A1-ATP analog-RocA-polypurine RNA complex
分子名称: (1R,2R,3S,3aR,8bS)-6,8-dimethoxy-3a-(4-methoxyphenyl)-N,N-dimethyl-1,8b-bis(oxidanyl)-3-phenyl-2,3-dihydro-1H-cyclopenta[b][1]benzofuran-2-carboxamide, Eukaryotic initiation factor 4A-I, MAGNESIUM ION, ...
著者Iwasaki, W, Takahashi, M, Sakamoto, A, Iwasaki, S, Ito, T.
登録日2018-02-16
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Translation Inhibitor Rocaglamide Targets a Bimolecular Cavity between eIF4A and Polypurine RNA.
Mol. Cell, 73, 2019
4PCV
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The structure of BdcA (YjgI) from E. coli
分子名称: BdcA (YjgI), PENTAETHYLENE GLYCOL, TRIETHYLENE GLYCOL
著者Page, R, Peti, W, Lord, D.
登録日2014-04-16
公開日2015-03-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献BdcA, a protein important for Escherichia coli biofilm dispersal, is a short-chain dehydrogenase/reductase that binds specifically to NADPH.
Plos One, 9, 2014
3PSM
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.98A crystal structure of a dimeric plant defensin SPE10
分子名称: Defensin
著者Zhou, H, Song, X, Gong, W.
登録日2010-12-01
公開日2010-12-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献0.98A crystal structure of a dimeric plant defensin SPE10
To be Published
3PV8
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Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to DNA and ddTTP-dA in Closed Conformation
分子名称: 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*C*AP*TP*AP*AP*GP*AP*GP*TP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(2DT))-3'), ...
著者Wang, W, Beese, L.S.
登録日2010-12-06
公開日2011-10-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis.
Proc.Natl.Acad.Sci.USA, 108, 2011
5ZHK
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Crystal structure of TrmD from Mycobacterium tuberculosis in complex with active-site inhibitor
分子名称: N-[(4-{[cyclohexyl(ethyl)amino]methyl}phenyl)methyl]-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidine-5-carboxamide, tRNA (guanine-N(1)-)-methyltransferase
著者Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C.
登録日2018-03-13
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism.
J.Med.Chem., 62, 2019

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件を2024-08-07に公開中

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