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PDB: 12929 件

2Q2R
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Trypanosoma cruzi glucokinase in complex with beta-D-glucose and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Glucokinase 1, putative, ...
著者Cordeiro, A.T, Caceres, A.J, Vertommen, D, Concepcion, J.L, Michels, P.A, Versees, W.
登録日2007-05-29
公開日2007-10-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Crystal Structure of Trypanosoma cruzi Glucokinase Reveals Features Determining Oligomerization and Anomer Specificity of Hexose-phosphorylating Enzymes.
J.Mol.Biol., 372, 2007
1URX
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Crystallographic structure of beta-agarase A in complex with oligoagarose
分子名称: 3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-alpha-D-galactopyranose, 3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose, BETA-AGARASE A, ...
著者Allouch, J, Helbert, W, Henrissat, B, Czjzek, M.
登録日2003-11-12
公開日2004-03-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Parallel Substrate Binding Sites in a Beta-Agarase Suggest a Novel Mode of Action on Double-Helical Agarose
Structure, 12, 2004
2GV6
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Crystal Structure of Matriptase with Inhibitor CJ-730
分子名称: (S)-3-(3-(4-(2-GUANIDINOETHYL)PIPERIDIN-1-YL)-2-(NAPHTHALENE-2-SULFONAMIDO)-3-OXOPROPYL)BENZIMIDAMIDE, Suppressor of tumorigenicity 14
著者Bode, W.
登録日2006-05-02
公開日2006-06-06
最終更新日2021-06-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Secondary Amides of Sulfonylated 3-Amidinophenylalanine. New Potent and Selective Inhibitors of Matriptase.
J.Med.Chem., 49, 2006
1UUB
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Solution structure of a truncated bovine pancreatic trypsin inhibitor mutant, 3-58 BPTI (K15R, R17A, R42S)
分子名称: BOVINE PANCREATIC TRYPSIN INHIBITOR
著者Zhang, W, Nielsen, C.B, Hansen, P.E.
登録日2003-12-17
公開日2004-01-29
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献NMR Solution Structures of Modified and Truncated Bovine Pancreatic Trypsin Inhibitor Proteins (3-58 Bpti'S)
To be Published
3IJK
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5-OMe modified DNA 8mer
分子名称: 5'-D(*GP*(UMS)P*GP*(T5O)P*AP*CP*AP*C)-3'
著者Sheng, J, Zhang, W, Hassan, A.E.A, Gan, J, Huang, Z.
登録日2009-08-04
公開日2009-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate
Chemistryselect, 8, 2023
2GQ6
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Crystal structure of an RNA racemate
分子名称: CALCIUM ION, GLYCEROL, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), ...
著者Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
登録日2006-04-20
公開日2006-06-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
1UXO
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The crystal structure of the ydeN gene product from B. subtilis
分子名称: Putative hydrolase YdeN
著者Janda, I.K, Devedjiev, Y, Cooper, D.R, Chruszcz, M, Derewenda, U, Gabrys, A, Minor, W, Joachimiak, A, Derewenda, Z.S, Midwest Center for Structural Genomics (MCSG)
登録日2004-02-27
公開日2004-05-27
最終更新日2022-05-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Harvesting the high-hanging fruit: the structure of the YdeN gene product from Bacillus subtilis at 1.8 angstroms resolution.
Acta Crystallogr. D Biol. Crystallogr., 60, 2004
2PK9
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Structure of the Pho85-Pho80 CDK-cyclin Complex of the Phosphate-responsive Signal Transduction Pathway
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cyclin-dependent protein kinase PHO85, PHO85 cyclin PHO80
著者Huang, K, Ferrin-O'Connell, I, Zhang, W, Leonard, G.A, O'Shea, E.K, Quiocho, F.A.
登録日2007-04-17
公開日2007-12-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.906 Å)
主引用文献Structure of the Pho85-Pho80 CDK-Cyclin Complex of the Phosphate-Responsive Signal Transduction Pathway
Mol.Cell, 28, 2007
1UND
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Solution structure of the human advillin C-terminal headpiece subdomain
分子名称: ADVILLIN
著者Vermeulen, W, Van Troys, M, Vanhaesebrouck, P, Verschueren, M, Fant, F, Ampe, C, Martins, J, Borremans, F.
登録日2003-09-09
公開日2004-07-15
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution Structures of the C-Terminal Headpiece Subdomains of Human Villin and Advillin, Evaluation of Headpiece F-Actin-Binding Requirements
Protein Sci., 13, 2004
3IKI
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5-SMe-dU containing DNA octamer
分子名称: 5'-D(*GP*(UMS)P*GP*(US2)P*AP*CP*AP*C)-3', MAGNESIUM ION
著者Sheng, J, Hassan, A.E.A, Zhang, W, Gan, J, Huang, Z.
登録日2009-08-05
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Hydrogen bond formation between the naturally modified nucleobase and phosphate backbone.
Nucleic Acids Res., 40, 2012
3ITA
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Crystal structure of Penicillin-Binding Protein 6 (PBP6) from E. coli in acyl-enzyme complex with ampicillin
分子名称: (2R,4S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, (2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID, D-alanyl-D-alanine carboxypeptidase dacC, ...
著者Chen, Y, Zhang, W, Shi, Q, Hesek, D, Lee, M, Mobashery, S, Shoichet, B.K.
登録日2009-08-27
公開日2009-10-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of penicillin-binding protein 6 from Escherichia coli.
J.Am.Chem.Soc., 131, 2009
2PT6
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The structure of Plasmodium falciparum spermidine synthase in complex with decarboxylated S-adenosylmethionine
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 5'-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5'-DEOXYADENOSINE, GLYCEROL, ...
著者Dufe, V.T, Qiu, W, Muller, I.B, Hui, R, Walter, R.D, Al-Karadaghi, S, Structural Genomics Consortium (SGC)
登録日2007-05-08
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Plasmodium falciparum spermidine synthase in complex with the substrate decarboxylated S-adenosylmethionine and the potent inhibitors 4MCHA and AdoDATO.
J.Mol.Biol., 373, 2007
2PSY
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BU of 2psy by Molmil
Crystal Structure of Human Kallikrein 5 in complex with Leupeptin and Zinc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Kallikrein-5, LEUPEPTIN, ...
著者Debela, M, Bode, W, Goettig, P.
登録日2007-05-07
公開日2007-09-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of the zinc inhibition of human tissue kallikrein 5.
J.Mol.Biol., 373, 2007
3J7N
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Virus model of brome mosaic virus (second half data set)
分子名称: Capsid protein
著者Wang, Z, Hryc, C, Bammes, B, Afonine, P.V, Jakana, J, Chen, D.H, Liu, X, Baker, M.L, Kao, C, Ludtke, S.J, Schmid, M.F, Adams, P.D, Chiu, W.
登録日2014-07-18
公開日2014-09-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
3J7L
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Full virus map of brome mosaic virus
分子名称: Capsid protein
著者Wang, Z, Hryc, C, Bammes, B, Afonine, P.V, Jakana, J, Chen, D.H, Liu, X, Baker, M.L, Kao, C, Ludtke, S.J, Schmid, M.F, Adams, P.D, Chiu, W.
登録日2014-07-18
公開日2014-09-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
3J8A
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Structure of the F-actin-tropomyosin complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者von der Ecken, J, Mueller, M, Lehman, W, Manstein, J.M, Penczek, A.P, Raunser, S.
登録日2014-10-08
公開日2014-12-10
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of the F-actin--tropomyosin complex.
Nature, 519, 2015
2PWP
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Crystal structure of spermidine synthase from Plasmodium falciparum in complex with spermidine
分子名称: GLYCEROL, SPERMIDINE, SULFATE ION, ...
著者Qiu, W, Dong, A, Ren, H, Wu, H, Zhao, Y, Schapira, M, Wasney, G, Vedadi, M, Lew, J, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Plotnikov, A.N, Bochkarev, A, Hui, R, Structural Genomics Consortium (SGC)
登録日2007-05-11
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of spermidine synthase from Plasmodium falciparum in complex with spermidine.
To be Published
1UYL
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Structure-Activity Relationships in purine-based inhibitor binding to HSP90 isoforms
分子名称: HEAT SHOCK PROTEIN HSP 90-ALPHA
著者Wright, L, Barril, X, Dymock, B, Sheridan, L, Surgenor, A, Beswick, M, Drysdale, M, Collier, A, Massey, A, Davies, N, Fink, A, Fromont, C, Aherne, W, Boxall, K, Sharp, S, Workman, P, Hubbard, R.E.
登録日2004-03-02
公開日2004-07-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure-Activity Relationships in Purine-Based Inhibitor Binding to Hsp90 Isoforms
Chem.Biol., 11, 2004
2M9J
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NMR solution structure of Pin1 WW domain mutant 6-1g
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
著者Enck, S, Chen, W, Price, J.L, Powers, E.T, Wong, C, Dyson, H.J, Kelly, J.W.
登録日2013-06-10
公開日2013-06-26
最終更新日2020-07-29
実験手法SOLUTION NMR
主引用文献Structural and energetic basis of carbohydrate-aromatic packing interactions in proteins.
J.Am.Chem.Soc., 135, 2013
3J7A
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Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit
分子名称: 18S ribosomal RNA, 40S ribosomal protein eS1, 40S ribosomal protein eS10, ...
著者Wong, W, Bai, X.C, Brown, A, Fernandez, I.S, Hanssen, E, Condron, M, Tan, Y.H, Baum, J, Scheres, S.H.W.
登録日2014-06-03
公開日2014-07-16
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine.
Elife, 3, 2014
1UY6
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Human Hsp90-alpha with 9-Butyl-8-(3,4,5-trimethoxy-benzyl)-9H-purin-6-ylamine
分子名称: 9-BUTYL-8-(3,4,5-TRIMETHOXYBENZYL)-9H-PURIN-6-AMINE, HEAT SHOCK PROTEIN HSP 90-ALPHA
著者Wright, L, Barril, X, Dymock, B, Sheridan, L, Surgenor, A, Beswick, M, Drysdale, M, Collier, A, Massey, A, Davies, N, Fink, A, Fromont, C, Aherne, W, Boxall, K, Sharp, S, Workman, P, Hubbard, R.E.
登録日2004-03-02
公開日2004-07-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-Activity Relationships in Purine-Based Inhibitor Binding to Hsp90 Isoforms
Chem.Biol., 11, 2004
1URD
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X-ray structures of the maltose-maltodextrin binding protein of the thermoacidophilic bacterium Alicyclobacillus acidocaldarius provide insight into acid stability of proteins
分子名称: MALTOSE-BINDING PROTEIN, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Schafer, K, Magnusson, U, Scheffel, F, Schiefner, A, Sandgren, M.O.J, Diederichs, K, Welte, W, Hulsmann, A, Schneider, E, Mowbray, S.L.
登録日2003-10-29
公開日2003-12-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献X-Ray Structures of the Maltose-Maltodextrin-Binding Protein of the Thermoacidophilic Bacterium Alicyclobacillus Acidocaldarius Provide Insight Into Acid Stability of Proteins.
J.Mol.Biol., 335, 2004
2GQ5
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Crystal structure of an RNA racemate
分子名称: CALCIUM ION, GLYCEROL, RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), ...
著者Rypniewski, W, Vallazza, M, Perbandt, M, Klussmann, S, Betzel, C, Erdmann, V.A.
登録日2006-04-20
公開日2006-06-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
2H52
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Crystal structure of human bisphosphoglycerate mutase complex with 3-phosphoglycerate (18 days)
分子名称: 3-PHOSPHOGLYCERIC ACID, Bisphosphoglycerate mutase, CYCLOHEXYLAMMONIUM ION
著者Wang, Y, Gong, W.
登録日2006-05-25
公開日2006-10-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Seeing the process of histidine phosphorylation in human bisphosphoglycerate mutase
To be Published
3JVJ
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Crystal structure of the bromodomain 1 in mouse Brd4
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, GLYCEROL
著者Vollmuth, F, Blankenfeldt, W, Geyer, M.
登録日2009-09-17
公開日2009-10-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structures of the Dual Bromodomains of the P-TEFb-activating Protein Brd4 at Atomic Resolution
J.Biol.Chem., 284, 2009

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件を2024-08-07に公開中

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