Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12920 件

3B9D
DownloadVisualize
BU of 3b9d by Molmil
Crystal structure of Vibrio harveyi chitinase A complexed with pentasaccharide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase A
著者Songsiriritthigul, C, Aguda, A.H, Robinson, R.C, Suginta, W.
登録日2007-11-05
公開日2008-04-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Crystal structures of Vibrio harveyi chitinase A complexed with chitooligosaccharides: implications for the catalytic mechanism
J.Struct.Biol., 162, 2008
5UBB
DownloadVisualize
BU of 5ubb by Molmil
Crystal structure of human alpha N-terminal protein methyltransferase 1B
分子名称: Alpha N-terminal protein methyltransferase 1B, S-ADENOSYLMETHIONINE, UNKNOWN ATOM OR ION
著者Dong, C, Zhu, L, Tempel, W, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2016-12-20
公開日2017-03-22
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An asparagine/glycine switch governs product specificity of human N-terminal methyltransferase NTMT2.
Commun Biol, 1, 2018
5UBI
DownloadVisualize
BU of 5ubi by Molmil
Catalytic core domain of Adenosine triphosphate phosphoribosyltransferase from Campylobacter jejuni with bound PRPP
分子名称: 1,2-ETHANEDIOL, 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, ACETATE ION, ...
著者Mittelstaedt, G, Jiao, W, Livingstone, E.K, Parker, E.J.
登録日2016-12-20
公開日2017-12-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献A dimeric catalytic core relates the short and long forms of ATP-phosphoribosyltransferase.
Biochem. J., 475, 2018
2IBM
DownloadVisualize
BU of 2ibm by Molmil
A novel dimer interface and conformational changes revealed by an X-ray structure of B. subtilis SecA
分子名称: ADENOSINE-5'-DIPHOSPHATE, Preprotein translocase secA subunit
著者Zimmer, J, Li, W, Rapoport, T.A.
登録日2006-09-11
公開日2006-11-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A Novel Dimer Interface and Conformational Changes Revealed by an X-ray Structure of B. subtilis SecA.
J.Mol.Biol., 364, 2006
5DPQ
DownloadVisualize
BU of 5dpq by Molmil
Crystal Structure of E72A mutant of domain swapped dimer Human Cellular Retinol Binding Protein
分子名称: ACETATE ION, Retinol-binding protein 2
著者Assar, Z, Nossoni, Z, Wang, W, Geiger, J.H, Borhan, B.
登録日2015-09-14
公開日2016-09-14
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.775 Å)
主引用文献Domain-Swapped Dimers of Intracellular Lipid-Binding Proteins: Evidence for Ordered Folding Intermediates.
Structure, 24, 2016
5UBA
DownloadVisualize
BU of 5uba by Molmil
Human RNA Pseudouridylate Synthase Domain Containing 4
分子名称: CALCIUM ION, CHLORIDE ION, RNA pseudouridylate synthase domain-containing protein 4, ...
著者DONG, A, ZENG, H, TEMPEL, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, BROWN, P.J, WU, H, Structural Genomics Consortium (SGC)
登録日2016-12-20
公開日2017-02-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献The Crystal Structure of Human Pseudouridylate Synthase Domain Containing 4. To be published
to be published
1PTF
DownloadVisualize
BU of 1ptf by Molmil
THE 1.6 ANGSTROMS STRUCTURE OF HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN HPR FROM STREPTOCOCCUS FAECALIS
分子名称: HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR
著者Jia, Z, Quail, W, Delbaere, L.
登録日1993-10-04
公開日1994-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The 1.6 A structure of histidine-containing phosphotransfer protein HPr from Streptococcus faecalis.
J.Mol.Biol., 236, 1994
2B3A
DownloadVisualize
BU of 2b3a by Molmil
Solution structure of the Ras-binding domain of the Ral Guanosine Dissociation Stimulator
分子名称: Ral guanine nucleotide dissociation stimulator
著者Gronwald, W, Maurer, T, Fuechsl, R, Wohlgemuth, S, Herrmann, C, Kalbitzer, H.R.
登録日2005-09-20
公開日2006-09-26
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献New insights into binding of the possible cancer target RalGDS
To be Published
2I6T
DownloadVisualize
BU of 2i6t by Molmil
Orthorhombic Structure of the LDH domain of Human Ubiquitin-conjugating Enzyme E2-like Isoform A
分子名称: GLYCEROL, SULFATE ION, UBIQUITIN-CONJUGATING ENZYME E2-LIKE ISOFORM A
著者Walker, J.R, Avvakumov, G.V, Xue, S, Newman, E.M, Finerty Jr, P.J, Butler-Cole, C, Tempel, W, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S.
登録日2006-08-29
公開日2006-10-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Investigation into the L-lactate Dehydrogenase Domain of Human Ubiquitin-conjugating Enzyme E2-like Isoform A
To be Published
2B34
DownloadVisualize
BU of 2b34 by Molmil
Structure of MAR1 Ribonuclease from Caenorhabditis elegans
分子名称: MAR1 Ribonuclease
著者Schormann, N, Karpova, E, Li, S, Symersky, J, Zhang, Y, Lu, S, Zhou, Q, Lin, G, Cao, Z, Luo, M, Qiu, S, Luan, C.-H, Luo, D, Huang, W, Shang, Q, McKinstry, A, An, J, Tsao, J, Carson, M, Stinnett, M, Chen, Y, Johnson, D, Gary, R, Arabshahi, A, Bunzel, R, Bray, T, DeLucas, L, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2005-09-19
公開日2005-09-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.141 Å)
主引用文献Structure of MAR1 Ribonuclease from Caenorhabditis elegans
To be Published
2I7C
DownloadVisualize
BU of 2i7c by Molmil
The crystal structure of spermidine synthase from p. falciparum in complex with AdoDATO
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, GLYCEROL, S-ADENOSYL-1,8-DIAMINO-3-THIOOCTANE, ...
著者Qiu, W, Dong, A, Ren, H, Wu, H, Wasney, G, Vedadi, M, Lew, J, Kozieradski, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Plotnikov, A.N, Bochkarev, A, Hui, R, Structural Genomics Consortium (SGC)
登録日2006-08-30
公開日2006-09-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Crystal structure of Plasmodium falciparum spermidine synthase in complex with the substrate decarboxylated S-adenosylmethionine and the potent inhibitors 4MCHA and AdoDATO.
J.Mol.Biol., 373, 2007
3B3A
DownloadVisualize
BU of 3b3a by Molmil
Structure of E163K/R145E DJ-1
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Protein DJ-1
著者Lakshminarasimhan, M, Maldonado, M.T, Zhou, W, Fink, A.L, Wilson, M.A.
登録日2007-10-19
公開日2008-01-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Impact of Three Parkinsonism-Associated Missense Mutations on Human DJ-1.
Biochemistry, 47, 2008
2B5U
DownloadVisualize
BU of 2b5u by Molmil
Crystal Structure Of Colicin E3 V206C Mutant In Complex With Its Immunity Protein
分子名称: CITRIC ACID, Colicin E3, Colicin E3 immunity protein
著者Nallini Vijayarangan, A, Nithianantham, S, Nan, W, Jakes, K, Shoham, M.
登録日2005-09-29
公開日2006-11-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure Of Colicin E3 In Complex With Its Immunity Protein
TO BE PUBLISHED
2AGQ
DownloadVisualize
BU of 2agq by Molmil
Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*(DOC))-3', 5'-D(*TP*CP*AP*TP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3', ...
著者Ling, H, Yang, W.
登録日2005-07-27
公開日2005-09-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
5E1L
DownloadVisualize
BU of 5e1l by Molmil
Structural and functional analysis of the E. coli FtsZ interacting protein, ZapC, reveals insight into molecular properties of a novel Z ring stabilizing protein
分子名称: Cell division protein ZapC
著者Schumacher, M.A, Huang, K.-H, Tchorzewski, L, Zeng, W, Janakiraman, A.
登録日2015-09-29
公開日2015-12-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural and Functional Analyses Reveal Insights into the Molecular Properties of the Escherichia coli Z Ring Stabilizing Protein, ZapC.
J.Biol.Chem., 291, 2016
3C00
DownloadVisualize
BU of 3c00 by Molmil
Crystal structural of the mutated G247T EscU/SpaS C-terminal domain
分子名称: EscU
著者Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
登録日2008-01-18
公開日2008-04-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
5E4N
DownloadVisualize
BU of 5e4n by Molmil
3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase from Mycobacterium tuberculosis with D-tyrosine bound in the tyrosine and phenylalanine binding sites
分子名称: 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase, CHLORIDE ION, D-TYROSINE, ...
著者Reichau, S, Jiao, W, Parker, E.J.
登録日2015-10-06
公開日2016-06-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Probing the Sophisticated Synergistic Allosteric Regulation of Aromatic Amino Acid Biosynthesis in Mycobacterium tuberculosis Using -Amino Acids.
Plos One, 11, 2016
3DJ7
DownloadVisualize
BU of 3dj7 by Molmil
Crystal structure of the mouse Aurora-A catalytic domain (Asn186->Gly, Lys240->Arg, Met302->Leu) in complex with Compound 130.
分子名称: 1-(5-{2-[(6-amino-5-bromopyrimidin-4-yl)amino]ethyl}-1,3-thiazol-2-yl)-3-[3-(trifluoromethyl)phenyl]urea, serine/threonine kinase 6
著者Elling, R.A, Yang, W, Erlanson, D.A, Tangonan, B.T, Hansen, S.K, Romanowski, M.J.
登録日2008-06-22
公開日2009-05-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献New fragment-based drug discovery
To be Published
5T0V
DownloadVisualize
BU of 5t0v by Molmil
Architecture of the Yeast Mitochondrial Iron-Sulfur Cluster Assembly Machinery: the Sub-Complex Formed by the Iron Donor, Yfh1, and the Scaffold, Isu1
分子名称: Frataxin homolog, mitochondrial, Iron sulfur cluster assembly protein 1
著者Ranatunga, W, Gakh, O, Galeano, B.K, Smith IV, D.Y, Soderberg, C.A, Al-Karadaghi, S, Thompson, J.R, Isaya, G.
登録日2016-08-16
公開日2016-08-31
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (17.5 Å)
主引用文献Architecture of the Yeast Mitochondrial Iron-Sulfur Cluster Assembly Machinery: the Sub-Complex Formed by the Iron Donor, Yfh1, and the Scaffold, Isu1
J. Biol. Chem., 291, 2016
3DL9
DownloadVisualize
BU of 3dl9 by Molmil
Crystal structure of CYP2R1 in complex with 1-alpha-hydroxy-vitamin D2
分子名称: (1S,3R,5Z,7E,22E)-9,10-secoergosta-5,7,10,22-tetraene-1,3-diol, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), Cytochrome P450 2R1, ...
著者Strushkevich, N.V, Tempel, W, Gilep, A.A, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Wilkstrom, M, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2008-06-26
公開日2008-08-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.721 Å)
主引用文献Crystal structure of CYP2R1 in complex with 1-alpha-hydroxy-vitamin D2.
To be Published
2AOQ
DownloadVisualize
BU of 2aoq by Molmil
Crystal structure of MutH-unmethylated DNA complex
分子名称: 5'-D(*GP*CP*AP*TP*GP*AP*TP*CP*AP*TP*GP*C)-3', CALCIUM ION, DNA mismatch repair protein mutH
著者Lee, J.Y, Chang, J, Joseph, N, Ghirlando, R, Rao, D.N, Yang, W.
登録日2005-08-13
公開日2005-10-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献MutH complexed with hemi- and unmethylated DNAs: coupling base recognition and DNA cleavage.
Mol.Cell, 20, 2005
2AS0
DownloadVisualize
BU of 2as0 by Molmil
Crystal Structure of PH1915 (APC 5817): A Hypothetical RNA Methyltransferase
分子名称: hypothetical protein PH1915
著者Sun, W, Xu, X, Pavlova, M, Edwards, A.M, Joachimiak, A, Savchenko, A, Christendat, D, Midwest Center for Structural Genomics (MCSG)
登録日2005-08-22
公開日2005-09-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The crystal structure of a novel SAM-dependent methyltransferase PH1915 from Pyrococcus horikoshii.
Protein Sci., 14, 2005
5GXT
DownloadVisualize
BU of 5gxt by Molmil
Crystal structure of PigG
分子名称: MAGNESIUM ION, Maltose-binding periplasmic protein,PigG
著者Zhang, F, Ran, T, Xu, D, Wang, W.
登録日2016-09-20
公開日2017-07-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.245 Å)
主引用文献Crystal structure of MBP-PigG fusion protein and the essential function of PigG in the prodigiosin biosynthetic pathway in Serratia marcescens FS14.
Int. J. Biol. Macromol., 99, 2017
5H0S
DownloadVisualize
BU of 5h0s by Molmil
EM Structure of VP1A and VP1B
分子名称: VP1
著者Li, X, Zhou, N, Xu, B, Chen, W, Zhu, B, Wang, X, Wang, J, Liu, H, Cheng, L.
登録日2016-10-06
公開日2017-01-25
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Near-Atomic Resolution Structure Determination of a Cypovirus Capsid and Polymerase Complex Using Cryo-EM at 200kV
J. Mol. Biol., 429, 2017
5SVE
DownloadVisualize
BU of 5sve by Molmil
Structure of Calcineurin in complex with NFATc1 LxVP peptide
分子名称: CALCIUM ION, Calcineurin subunit B type 1, FE (III) ION, ...
著者Sheftic, S.R, Page, R, Peti, W.
登録日2016-08-05
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.596 Å)
主引用文献Investigating the human Calcineurin Interaction Network using the pi LxVP SLiM.
Sci Rep, 6, 2016

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon