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PDB: 12895 件

3IYG
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Ca model of bovine TRiC/CCT derived from a 4.0 Angstrom cryo-EM map
分子名称: T-complex protein 1 subunit, T-complex protein 1 subunit alpha, T-complex protein 1 subunit beta, ...
著者Cong, Y, Baker, M.L, Ludtke, S.J, Frydman, J, Chiu, W.
登録日2009-11-28
公開日2010-03-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement.
Proc.Natl.Acad.Sci.USA, 107, 2010
2JPB
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BU of 2jpb by Molmil
Solution Structure of OMPR-C DNA Binding Protein
分子名称: Transcriptional regulatory protein ompR
著者Liao, X, Kenney, L, Liao, W, Integrated Center for Structure and Function Innovation (ISFI)
登録日2007-05-03
公開日2007-06-12
最終更新日2023-12-20
実験手法SOLUTION NMR
主引用文献Solution Structure of OMPR-C DNA Binding Protein
To be Published
1Q55
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BU of 1q55 by Molmil
W-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者He, W, Cowin, P, Stokes, D.L.
登録日2003-08-06
公開日2003-10-07
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (30 Å)
主引用文献Untangling Desmosomal Knots with Electron Tomography
Science, 302, 2003
3IZM
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Mm-cpn wildtype with ATP
分子名称: Chaperonin
著者Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
登録日2010-10-30
公開日2011-02-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3J0C
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BU of 3j0c by Molmil
Models of E1, E2 and CP of Venezuelan Equine Encephalitis Virus TC-83 strain restrained by a near atomic resolution cryo-EM map
分子名称: Capsid protein, E1 envelope glycoprotein, E2 envelope glycoprotein
著者Zhang, R, Hryc, C.F, Cong, Y, Liu, X, Jakana, J, Gorchakov, R, Baker, M.L, Weaver, S.C, Chiu, W.
登録日2011-06-22
公開日2011-08-24
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献4.4 A cryo-EM structure of an enveloped alphavirus Venezuelan equine encephalitis virus.
Embo J., 30, 2011
3IYF
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BU of 3iyf by Molmil
Atomic Model of the Lidless Mm-cpn in the Open State
分子名称: Chaperonin
著者Zhang, J, Baker, M.L, Schroeder, G, Douglas, N.R, Reissmann, S, Jakana, J, Dougherty, M, Fu, C.J, Levitt, M, Ludtke, S.J, Frydman, J, Chiu, W.
登録日2009-10-23
公開日2010-02-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Mechanism of folding chamber closure in a group II chaperonin
Nature, 463, 2010
3IZL
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BU of 3izl by Molmil
Mm-cpn rls deltalid with ATP and AlFx
分子名称: Mm-cpn rls deltalid
著者Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
登録日2010-10-29
公開日2011-02-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3WMJ
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BU of 3wmj by Molmil
Crystal structure of EIAV vaccine gp45
分子名称: EIAV vaccine gp45
著者Liu, X, Du, J, Qiao, W.
登録日2013-11-19
公開日2014-11-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献A mutation associated with EIAV vaccine strain within heptad repeat of EIAV gp45 provides insight into vaccine development for HIV
To be Published
3IZN
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Mm-cpn deltalid with ATP
分子名称: Chaperonin
著者Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
登録日2010-10-30
公開日2011-02-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
3J0F
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BU of 3j0f by Molmil
Sindbis virion
分子名称: Capsid protein, E1 envelope glycoprotein, E2 envelope glycoprotein
著者Tang, J, Jose, J, Zhang, W, Chipman, P, Kuhn, R.J, Baker, T.S.
登録日2011-07-08
公開日2011-10-12
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Molecular Links between the E2 Envelope Glycoprotein and Nucleocapsid Core in Sindbis Virus.
J.Mol.Biol., 414, 2011
4ZMK
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BU of 4zmk by Molmil
Crystal structure of the dimerization domain of S. pombe Taz1
分子名称: Telomere length regulator taz1
著者Deng, W, Wu, J, Wang, F, Lei, M.
登録日2015-05-04
公開日2015-09-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Fission yeast telomere-binding protein Taz1 is a functional but not a structural counterpart of human TRF1 and TRF2.
Cell Res., 25, 2015
3IZP
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BU of 3izp by Molmil
Conformation of EF-G during translocation
分子名称: Elongation factor G
著者Li, W, Trabuco, L.G, Schulten, K, Frank, J.
登録日2010-11-15
公開日2011-03-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY
主引用文献Molecular dynamics of EF-G during translocation.
Proteins, 79, 2011
3CNI
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BU of 3cni by Molmil
Crystal structure of a domain of a putative ABC type-2 transporter from Thermotoga maritima MSB8
分子名称: CALCIUM ION, Putative ABC type-2 transporter
著者Filippova, E.V, Shumilin, I, Tkaczuk, K.L, Cymborowski, M, Chruszcz, M, Xu, X, Que, Q, Savchenko, A, Edwards, A.M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2008-03-25
公開日2008-04-08
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural characterization of the putative ABC-type 2 transporter from Thermotoga maritima MSB8.
J.Struct.Funct.Genom., 15, 2014
8A6U
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BU of 8a6u by Molmil
PcIDS1 in complex with Mg2+
分子名称: Isoprenyl diphosphate synthase, MAGNESIUM ION
著者Ecker, F, Boland, W, Groll, M.
登録日2022-06-20
公開日2023-05-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Metal-dependent enzyme symmetry guides the biosynthetic flux of terpene precursors.
Nat.Chem., 15, 2023
3IZK
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BU of 3izk by Molmil
Mm-cpn rls deltalid with ATP
分子名称: Chaperonin
著者Douglas, N.R, Reissmann, S, Zhang, J, Chen, B, Jakana, J, Kumar, R, Chiu, W, Frydman, J.
登録日2010-10-29
公開日2011-02-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Dual Action of ATP Hydrolysis Couples Lid Closure to Substrate Release into the Group II Chaperonin Chamber.
Cell(Cambridge,Mass.), 144, 2011
2JFT
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BU of 2jft by Molmil
Crystal structure of the PPM Ser-Thr phosphatase MsPP from Mycobacterium smegmatis in complex with sulfate
分子名称: MAGNESIUM ION, MANGANESE (II) ION, SER-THR PHOSPHATASE MSPP, ...
著者Bellinzoni, M, Wehenkel, A, Shepard, W, Alzari, P.M.
登録日2007-02-04
公開日2007-07-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Insights Into the Mechanism of Ppm Ser/Thr Phosphatases from the Atomic Resolution Structures of a Mycobacterial Enzyme
Structure, 15, 2007
2JFR
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BU of 2jfr by Molmil
Crystal structure of the PPM Ser-Thr phosphatase MsPP from Mycobacterium smegmatis in complex with phosphate at 0.83 A resolution
分子名称: CHLORIDE ION, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Bellinzoni, M, Wehenkel, A, Shepard, W, Alzari, P.M.
登録日2007-02-04
公開日2007-07-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (0.83 Å)
主引用文献Insights Into the Mechanism of Ppm Ser/Thr Phosphatases from the Atomic Resolution Structures of a Mycobacterial Enzyme
Structure, 15, 2007
3CON
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BU of 3con by Molmil
Crystal structure of the human NRAS GTPase bound with GDP
分子名称: GTPase NRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Nedyalkova, L, Tong, Y, Tempel, W, Shen, L, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2008-03-28
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.649 Å)
主引用文献Crystal structure of the human NRAS GTPase bound with GDP.
To be Published
3COS
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BU of 3cos by Molmil
Crystal structure of human class II alcohol dehydrogenase (ADH4) in complex with NAD and Zn
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, Alcohol dehydrogenase 4, ...
著者Kavanagh, K.L, Shafqat, N, Yue, W, von Delft, F, Bishop, S, Roos, A, Murray, J, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2008-03-29
公開日2008-04-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of human class II alcohol dehydrogenase (ADH4) in complex with NAD and Zn.
To be Published
8A7K
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BU of 8a7k by Molmil
PcIDS1 in complex with Mg2+/Mn2+, IPP, and ZOL
分子名称: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, GLYCEROL, Isoprenyl diphosphate synthase, ...
著者Ecker, F, Boland, W, Groll, M.
登録日2022-06-21
公開日2023-05-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Metal-dependent enzyme symmetry guides the biosynthetic flux of terpene precursors.
Nat.Chem., 15, 2023
8A6V
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BU of 8a6v by Molmil
PcIDS1 in complex with Mg2+ and IPP
分子名称: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Isoprenyl diphosphate synthase, MAGNESIUM ION
著者Ecker, F, Boland, W, Groll, M.
登録日2022-06-20
公開日2023-05-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Metal-dependent enzyme symmetry guides the biosynthetic flux of terpene precursors.
Nat.Chem., 15, 2023
7ZPN
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BU of 7zpn by Molmil
Crystal Structure of IscR from Dinoroseobacter shibae
分子名称: GLYCEROL, HTH-type transcriptional regulator, SULFATE ION
著者Lukat, P, Ploetzky, L, Blankenfeldt, W, Jahn, D, Haertig, E.
登録日2022-04-28
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Dinoroseobacter shibae IscR homolog acts as a repressor for iron acquisition genes
To Be Published
3J32
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BU of 3j32 by Molmil
An asymmetric unit map from electron cryo-microscopy of Haliotis diversicolor molluscan hemocyanin isoform 1 (HdH1)
分子名称: Hemocyanin isoform 1
著者Zhang, Q, Dai, X, Cong, Y, Zhang, J, Chen, D.-H, Dougherty, M, Wang, J, Ludtke, S, Schmid, M.F, Chiu, W.
登録日2013-02-20
公開日2013-04-17
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Cryo-EM structure of a molluscan hemocyanin suggests its allosteric mechanism.
Structure, 21, 2013
4Z3S
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BU of 4z3s by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 3'-deoxy-3'-{[(2E)-3-(4-{[(4Z)-6-O-(6-deoxy-3,4-di-O-methyl-alpha-D-mannopyranosyl)-5-O-methyl-alpha-D-threo-hex-4-enofuranosyl]oxy}phenyl)-2-methylprop-2-enoyl]amino}-N,N-dimethyladenosine, ...
著者Polikanov, Y.S, Starosta, A.L, Juette, M.F, Altman, R.B, Terry, D.S, Lu, W, Burnett, B.J, Dinos, G, Reynolds, K, Blanchard, S.C, Steitz, T.A, Wilson, D.N.
登録日2015-03-31
公開日2015-06-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Distinct tRNA Accommodation Intermediates Observed on the Ribosome with the Antibiotics Hygromycin A and A201A.
Mol.Cell, 58, 2015
3J7L
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Full virus map of brome mosaic virus
分子名称: Capsid protein
著者Wang, Z, Hryc, C, Bammes, B, Afonine, P.V, Jakana, J, Chen, D.H, Liu, X, Baker, M.L, Kao, C, Ludtke, S.J, Schmid, M.F, Adams, P.D, Chiu, W.
登録日2014-07-18
公開日2014-09-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014

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