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PDB: 12920 件

5IJE
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Crystal structure of Equine Serum Albumin in the presence of 30 mM zinc at pH 7.4
分子名称: SULFATE ION, Serum albumin, ZINC ION
著者Handing, K.B, Shabalin, I.G, Cooper, D.R, Szlachta, K, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2016-03-01
公開日2016-04-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Circulatory zinc transport is controlled by distinct interdomain sites on mammalian albumins.
Chem Sci, 7, 2016
1IDW
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BU of 1idw by Molmil
STRUCTURE OF THE HYBRID RNA/DNA R-GCUUCGGC-D[CL]U IN PRESENCE OF RH(NH3)6+++
分子名称: 5'-R(*GP*CP*UP*UP*CP*GP*GP*C)-D(P*(UCL))-3', CHLORIDE ION, RHODIUM HEXAMINE ION
著者Cruse, W, Saludjian, P, Neuman, A, Prange, T.
登録日2001-04-05
公開日2001-04-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Destabilizing effect of a fluorouracil extra base in a hybrid RNA duplex compared with bromo and chloro analogues
Acta Crystallogr.,Sect.D, 57, 2001
8JC0
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V gamma9 V delta2 TCR and CD3 complex in LMNG
分子名称: CHOLESTEROL, T cell receptor delta variable 2,T cell receptor delta constant, T cell receptor gamma variable 9,T cell receptor gamma constant 1, ...
著者Xin, W, Huang, B, Chi, X, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
登録日2023-05-10
公開日2024-05-08
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 630, 2024
8EC0
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III2IV respiratory supercomplex from Saccharomyces cerevisiae cardiolipin-lacking mutant
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL, ...
著者Hryc, C.F, Mileykovskaya, E, Baker, M, Dowhan, W.
登録日2022-08-31
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural insights into cardiolipin replacement by phosphatidylglycerol in a cardiolipin-lacking yeast respiratory supercomplex.
Nat Commun, 14, 2023
8JA5
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BU of 8ja5 by Molmil
Crystal structure of Nipah Virus attachment (G) glycoprotein in complex with neutralizing antibody 14F8
分子名称: 14F8 antibody heavy chain, 14F8 antibody light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Li, Y.H, Huang, X.Y, Xu, J.J, Chen, W.
登録日2023-05-05
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Crystal structure of Nipah Virus attachment (G) glycoprotein in complex with neutralizing antibody 14F8
To Be Published
8JCB
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BU of 8jcb by Molmil
Vgamma5 Vdelta1 T cell receptor complex
分子名称: T cell receptor delta variable 1,T cell receptor delta constant, T cell receptor gamma variable 5,T cell receptor gamma constant 1, T-cell surface glycoprotein CD3 delta chain, ...
著者Xin, W, Huang, B, Chi, X, Xu, M, Zhang, Y, Li, X, Su, Q, Zhou, Q.
登録日2023-05-10
公開日2024-05-08
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 630, 2024
8E7S
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BU of 8e7s by Molmil
III2IV2 respiratory supercomplex from Saccharomyces cerevisiae with 4 bound UQ6
分子名称: (5S,11R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-4,6,10,12,16-pentaoxa-5,11-diphosphaoctadec-1-yl pentadecanoate, 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL, ...
著者Hryc, C.F, Mileykovskaya, E, Baker, M, Dowhan, W.
登録日2022-08-24
公開日2023-05-24
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into cardiolipin replacement by phosphatidylglycerol in a cardiolipin-lacking yeast respiratory supercomplex.
Nat Commun, 14, 2023
8JBV
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BU of 8jbv by Molmil
Extracellular domain of gamma delta TCR
分子名称: T cell receptor delta variable 1,T cell receptor delta constant, T cell receptor gamma variable 5,T cell receptor gamma constant 1
著者Xin, W, Chi, X, Huang, B, Su, Q, Zhou, Q.
登録日2023-05-09
公開日2024-05-08
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Structures of human gamma delta T cell receptor-CD3 complex.
Nature, 630, 2024
6M0V
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BU of 6m0v by Molmil
Crsytal structure of streptococcus thermophilus Cas9 in complex with the GGAA PAM
分子名称: BARIUM ION, CRISPR-associated endonuclease Cas9 1, DNA (28-MER), ...
著者Zhang, Y, Zhang, H, Xu, X, Wang, Y, Chen, W, Wang, Y, Wu, Z, Tang, N, Wang, Y, Zhao, S, Gan, J, Ji, Q.
登録日2020-02-22
公開日2020-09-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Catalytic-state structure and engineering of Streptococcus thermophilus Cas9
Nat Catal, 2020
8JIK
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BU of 8jik by Molmil
Alanine decarboxylase
分子名称: CALCIUM ION, ETHANAMINE, PYRIDOXAL-5'-PHOSPHATE, ...
著者Gong, W, Wang, H.
登録日2023-05-26
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of alanine decarboxylase
To Be Published
8SFY
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BU of 8sfy by Molmil
Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with UDP-glucose
分子名称: UDP-glycosyltransferase 202A2, URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Arriaza, R.H, Daneshian, L, Dermauw, W, Wybouw, N, Van Leeuwen, T, Chruszcz, M.
登録日2023-04-11
公開日2023-09-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with UDP-glucose
To Be Published
5AY7
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BU of 5ay7 by Molmil
A psychrophilic glycoside hydrolase family 10 endo-beta-1,4-xylanase
分子名称: xylanase
著者Zheng, Y, Li, Y, Liu, W, Guo, R.T.
登録日2015-08-10
公開日2016-02-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural insight into potential cold adaptation mechanism through a psychrophilic glycoside hydrolase family 10 endo-beta-1,4-xylanase.
J.Struct.Biol., 193, 2016
2YSP
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BU of 2ysp by Molmil
Solution structure of the C2H2 type zinc finger (region 507-539) of human Zinc finger protein 224
分子名称: ZINC ION, Zinc finger protein 224
著者Takahashi, M, Kuwasako, K, Tsuda, K, Tanabe, W, Harada, T, Watanabe, S, Tochio, N, Muto, Y, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-03
公開日2007-10-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the C2H2 type zinc finger (region 507-539)of human Zinc finger protein 224
To be Published
2YV3
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BU of 2yv3 by Molmil
Crystal Structure of Aspartate Semialdehyde Dehydrogenase from Thermus thermophilus HB8
分子名称: Aspartate-semialdehyde dehydrogenase
著者Kagawa, W, Fujikawa, N, Kurumizaka, H, Bessho, Y, Ellis, M.J, Antonyuk, S.V, Strange, R.W, Hasnain, S.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-07
公開日2007-10-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of Aspartate Semialdehyde Dehydrogenase from Thermus thermophilus HB8
To be Published
8GS1
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BU of 8gs1 by Molmil
Crystal structure of AziU2-U3 complex from Streptomyces sahachiroi NRRL2485
分子名称: Azi28, Azi29, FORMIC ACID, ...
著者Cheng, Y, Li, P, Liu, W, Fang, P.
登録日2022-09-04
公開日2023-09-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Oxidase Heterotetramer Completes 1-Azabicyclo[3.1.0]hexane Formation with the Association of a Nonribosomal Peptide Synthetase.
J.Am.Chem.Soc., 145, 2023
8JIJ
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BU of 8jij by Molmil
Alanine decarboxylase
分子名称: PYRIDOXAL-5'-PHOSPHATE, Serine decarboxylase, ZINC ION
著者Gong, W, Wang, H.
登録日2023-05-26
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of alanine decarboxylase
To Be Published
6M7T
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BU of 6m7t by Molmil
Human DNA polymerase eta in a non-productive ternary complex with Ca2+ and dTTP oppositing cdA
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DNA (5'-D(*AP*GP*TP*GP*TP*GP*AP*G)-3'), ...
著者Weng, P, Gao, Y, Yang, W.
登録日2018-08-21
公開日2018-09-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Bypassing a 8,5'-cyclo-2'-deoxyadenosine lesion by human DNA polymerase eta at atomic resolution.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8SFU
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BU of 8sfu by Molmil
Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with naringin
分子名称: (2S)-5-hydroxy-2-(4-hydroxyphenyl)-4-oxo-3,4-dihydro-2H-1-benzopyran-7-yl 2-O-(6-deoxy-alpha-L-mannopyranosyl)-beta-D-glucopyranoside, UDP-glycosyltransferase 202A2, URIDINE-5'-DIPHOSPHATE
著者Arriaza, R.H, Dermauw, W, Wybouw, N, Van Leeuwen, T, Chruszcz, M.
登録日2023-04-11
公開日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of TuUGT202A2 (Tetur22g00270) in complex with naringin
To Be Published
5IKW
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BU of 5ikw by Molmil
Crystal Structure of BMP-2-inducible kinase in complex with an Indazole inhibitor
分子名称: BMP-2-inducible protein kinase, N-(6-{3-[(cyclopropylsulfonyl)amino]phenyl}-1H-indazol-3-yl)cyclopropanecarboxamide
著者Counago, R.M, Sorrell, F.J, Krojer, T, Savitsky, P, Elkins, J.M, Axtman, A, Drewry, D, Wells, C, Zhang, C, Zuercher, W, Willson, T.M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Arruda, P, Gileadi, O, Structural Genomics Consortium (SGC)
登録日2016-03-04
公開日2016-06-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Crystal Structure of BMP-2-inducible kinase in complex with a 3-acylaminoindazole inhibitor GSK3236425A
To Be Published
5IPI
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BU of 5ipi by Molmil
Structure of Adeno-associated virus type 2 VLP
分子名称: Capsid protein VP1
著者Drouin, L.M, Lins, B, Janssen, M.E, Bennet, A, Chipman, P, McKenna, R, Chen, W, Muzyczka, N, Cardone, G, Baker, T.S, Agbandje-McKenna, M.
登録日2016-03-09
公開日2016-07-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-electron Microscopy Reconstruction and Stability Studies of the Wild Type and the R432A Variant of Adeno-associated Virus Type 2 Reveal that Capsid Structural Stability Is a Major Factor in Genome Packaging.
J.Virol., 90, 2016
5IM4
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BU of 5im4 by Molmil
Crystal structure of designed two-component self-assembling icosahedral cage I52-32
分子名称: 6,7-dimethyl-8-ribityllumazine synthase, Phosphotransferase system, mannose/fructose-specific component IIA
著者Liu, Y.A, Cascio, D, Sawaya, M.R, Bale, J.B, Collazo, M.J, Thomas, C, Sheffler, W, King, N.P, Baker, D, Yeates, T.O.
登録日2016-03-05
公開日2016-07-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Accurate design of megadalton-scale two-component icosahedral protein complexes.
Science, 353, 2016
6MBT
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BU of 6mbt by Molmil
Crystal structure of wild-type KRAS bound to GDP and Mg (Space group C2)
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Dharmaiah, S, Tran, T.H, Yan, W, Simanshu, D.K.
登録日2018-08-30
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structures of N-terminally processed KRAS provide insight into the role of N-acetylation.
Sci Rep, 9, 2019
6ME7
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BU of 6me7 by Molmil
XFEL crystal structure of human melatonin receptor MT2 (H208A) in complex with 2-phenylmelatonin
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, N-[2-(5-methoxy-2-phenyl-1H-indol-3-yl)ethyl]acetamide, Soluble cytochrome b562,Melatonin receptor type 1B,Rubredoxin, ...
著者Johansson, L.C, Stauch, B, McCorvy, J, Han, G.W, Patel, N, Batyuk, A, Gati, C, Li, C, Grandner, J, Hao, S, Olsen, R.H.J, Tribo, A.R, Zaare, S, Zhu, L, Zatsepin, N.A, Weierstall, U, Liu, W, Roth, B.L, Katritch, V, Cherezov, V.
登録日2018-09-05
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献XFEL structures of the human MT2melatonin receptor reveal the basis of subtype selectivity.
Nature, 569, 2019
5BP7
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BU of 5bp7 by Molmil
Crystal structure of SAM-dependent methyltransferase from Geobacter sulfurreducens in complex with S-Adenosyl-L-homocysteine
分子名称: CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, SAM-dependent methyltransferase
著者Kutner, J, Shabalin, I.G, Mason, D.V, Handing, K.B, Gasiorowska, O.A, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2015-05-27
公開日2015-06-10
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of SAM-dependent methyltransferase from Geobacter sulfurreducens in complex with S-Adenosyl-L-homocysteine
to be published
5IIX
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BU of 5iix by Molmil
Crystal structure of Equine Serum Albumin in the presence of 15 mM zinc at pH 6.5
分子名称: SULFATE ION, Serum albumin, UNKNOWN LIGAND, ...
著者Handing, K.B, Shabalin, I.G, Cooper, D.R, Gasiorowska, O.A, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2016-03-01
公開日2016-03-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Circulatory zinc transport is controlled by distinct interdomain sites on mammalian albumins.
Chem Sci, 7, 2016

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