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PDB: 644 results

1GNT
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Hybrid Cluster Protein from Desulfovibrio vulgaris. X-ray structure at 1.25A resolution using synchrotron radiation.
Descriptor: HYBRID CLUSTER PROTEIN, IRON/SULFUR CLUSTER, IRON/SULFUR/OXYGEN HYBRID CLUSTER
Authors:Macedo, S, Mitchell, E.P, Romao, C.V, Cooper, S.J, Coelho, R, Liu, M.Y, Xavier, A.V, Legall, J, Bailey, S, Garner, D.C, Hagen, W.R, Teixeira, M, Carrondo, M.A, Lindley, P.
Deposit date:2001-10-08
Release date:2002-04-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Hybrid cluster proteins (HCPs) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at 1.25 A resolution using synchrotron radiation.
J. Biol. Inorg. Chem., 7, 2002
1HBZ
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BU of 1hbz by Molmil
Catalase from Micrococcus lysodeikticu
Descriptor: CATALASE, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Murshudov, G.N, Grebenko, A.I, Barynin, V.V, Braningen, J, Wilson, K.S, Dauter, Z, Melik-Adamyan, W.R.
Deposit date:2001-04-24
Release date:2001-05-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Three-Dimensional Structure of Catalase from Micrococcus Lysodeikticus at 1.5A Resolution
FEBS Lett., 312, 1992
7TPM
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BU of 7tpm by Molmil
Structure of the outer-membrane lipoprotein carrier protein (LolA) from Borrelia burgdorferi
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CHLORIDE ION, Outer membrane lipoprotein carrier protein LolA, ...
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Zueckert, W.R.
Deposit date:2022-01-25
Release date:2023-03-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the outer-membrane lipoprotein carrier protein (LolA) from Borrelia burgdorferi
To be published
7UU6
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BU of 7uu6 by Molmil
Crystal structure of the SARS-CoV-2 main protease in its apo-form
Descriptor: 3C-like proteinase nsp5
Authors:Yang, K.S, Liu, W.R.
Deposit date:2022-04-28
Release date:2023-01-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Novel Y-Shaped, S-O-N-O-S-Bridged Cross-Link between Three Residues C22, C44, and K61 Is Frequently Observed in the SARS-CoV-2 Main Protease.
Acs Chem.Biol., 18, 2023
7UU8
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BU of 7uu8 by Molmil
Crystal structure of the SARS-CoV-2 main protease in its apo-form
Descriptor: 3C-like proteinase nsp5
Authors:Yang, K.S, Liu, W.R.
Deposit date:2022-04-28
Release date:2023-01-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Novel Y-Shaped, S-O-N-O-S-Bridged Cross-Link between Three Residues C22, C44, and K61 Is Frequently Observed in the SARS-CoV-2 Main Protease.
Acs Chem.Biol., 18, 2023
7UUC
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BU of 7uuc by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI19
Descriptor: 3C-like proteinase nsp5, N-[(benzyloxy)carbonyl]-3-methyl-L-valyl-3-cyclopropyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide
Authors:Yang, K.S, Liu, W.R.
Deposit date:2022-04-28
Release date:2023-01-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Novel Y-Shaped, S-O-N-O-S-Bridged Cross-Link between Three Residues C22, C44, and K61 Is Frequently Observed in the SARS-CoV-2 Main Protease.
Acs Chem.Biol., 18, 2023
7UU7
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BU of 7uu7 by Molmil
Crystal structure of the SARS-CoV-2 main protease in its apo-form
Descriptor: 3C-like proteinase nsp5
Authors:Yang, K.S, Liu, W.R.
Deposit date:2022-04-28
Release date:2023-01-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:A Novel Y-Shaped, S-O-N-O-S-Bridged Cross-Link between Three Residues C22, C44, and K61 Is Frequently Observed in the SARS-CoV-2 Main Protease.
Acs Chem.Biol., 18, 2023
7UUB
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BU of 7uub by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI12
Descriptor: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, N-[(benzyloxy)carbonyl]-L-valyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-4-methylidene-L-norvalinamide
Authors:Yang, K.S, Liu, W.R.
Deposit date:2022-04-28
Release date:2023-01-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:A Novel Y-Shaped, S-O-N-O-S-Bridged Cross-Link between Three Residues C22, C44, and K61 Is Frequently Observed in the SARS-CoV-2 Main Protease.
Acs Chem.Biol., 18, 2023
7UUA
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BU of 7uua by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI8
Descriptor: 3C-like proteinase nsp5, N-[(BENZYLOXY)CARBONYL]-O-(TERT-BUTYL)-L-THREONYL-3-CYCLOHEXYL-N-[(1S)-2-HYDROXY-1-{[(3S)-2-OXOPYRROLIDIN-3-YL]METHYL}ETHYL]-L-ALANINAMIDE
Authors:Yang, K.S, Liu, W.R.
Deposit date:2022-04-28
Release date:2023-01-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Novel Y-Shaped, S-O-N-O-S-Bridged Cross-Link between Three Residues C22, C44, and K61 Is Frequently Observed in the SARS-CoV-2 Main Protease.
Acs Chem.Biol., 18, 2023
7UU9
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BU of 7uu9 by Molmil
Crystal structure of the SARS-CoV-2 main protease in its apo-form
Descriptor: 3C-like proteinase nsp5
Authors:Yang, K.S, Liu, W.R.
Deposit date:2022-04-28
Release date:2023-01-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:A Novel Y-Shaped, S-O-N-O-S-Bridged Cross-Link between Three Residues C22, C44, and K61 Is Frequently Observed in the SARS-CoV-2 Main Protease.
Acs Chem.Biol., 18, 2023
7UUE
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BU of 7uue by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI85
Descriptor: 3C-like proteinase nsp5, benzyl [(2S,3R)-1-({(2S)-1-[2-(3-amino-3-oxopropyl)-2-propanoylhydrazinyl]-3-cyclohexyl-1-oxopropan-2-yl}amino)-3-tert-butoxy-1-oxobutan-2-yl]carbamate (non-preferred name)
Authors:Yang, K.S, Liu, W.R.
Deposit date:2022-04-28
Release date:2023-01-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Novel Y-Shaped, S-O-N-O-S-Bridged Cross-Link between Three Residues C22, C44, and K61 Is Frequently Observed in the SARS-CoV-2 Main Protease.
Acs Chem.Biol., 18, 2023
7UUD
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BU of 7uud by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI33
Descriptor: (1R,2S,5S)-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-N-{(2S,3R)-4-(ethylamino)-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
Authors:Yang, K.S, Liu, W.R.
Deposit date:2022-04-28
Release date:2023-01-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A Novel Y-Shaped, S-O-N-O-S-Bridged Cross-Link between Three Residues C22, C44, and K61 Is Frequently Observed in the SARS-CoV-2 Main Protease.
Acs Chem.Biol., 18, 2023
3IHI
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BU of 3ihi by Molmil
Crystal structure of mouse thymidylate synthase
Descriptor: SULFATE ION, Thymidylate synthase
Authors:Dowiercial, A, Jarmula, A, Rypniewski, W.R, Sokolowska, M, Fraczyk, T, Ciesla, J, Rode, W.
Deposit date:2009-07-30
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Mouse thymidylate synthase does not show the inactive conformation, observed for the human enzyme
Struct Chem, 2016
3IIY
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BU of 3iiy by Molmil
Crystal structure of Eed in complex with a trimethylated histone H1K26 peptide
Descriptor: Histone H1K26 peptide, Polycomb protein EED
Authors:Justin, N, Sharpe, M.L, Martin, S, Taylor, W.R, De Marco, V, Gamblin, S.J.
Deposit date:2009-08-03
Release date:2009-09-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Role of the polycomb protein EED in the propagation of repressive histone marks.
Nature, 461, 2009
3IIW
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BU of 3iiw by Molmil
Crystal structure of Eed in complex with a trimethylated histone H3K27 peptide
Descriptor: Histone H3 peptide, Polycomb protein EED
Authors:Justin, N, Sharpe, M.L, Martin, S, Taylor, W.R, De Marco, V, Gamblin, S.J.
Deposit date:2009-08-03
Release date:2009-09-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of the polycomb protein EED in the propagation of repressive histone marks.
Nature, 461, 2009
3IJ0
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BU of 3ij0 by Molmil
Crystal structure of Eed in complex with a trimethylated histone H3K9 peptide
Descriptor: Histone H3K9 peptide, Polycomb protein EED
Authors:Justin, N, Sharpe, M.L, Martin, S, Taylor, W.R, De Marco, V, Gamblin, S.J.
Deposit date:2009-08-03
Release date:2009-09-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Role of the polycomb protein EED in the propagation of repressive histone marks.
Nature, 461, 2009
3IJC
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BU of 3ijc by Molmil
Crystal structure of Eed in complex with NDSB-195
Descriptor: ETHYL DIMETHYL AMMONIO PROPANE SULFONATE, Polycomb protein EED
Authors:Justin, N, Sharpe, M.L, Martin, S, Taylor, W.R, De Marco, V, Gamblin, S.J.
Deposit date:2009-08-04
Release date:2009-09-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Role of the polycomb protein EED in the propagation of repressive histone marks.
Nature, 461, 2009
7TUU
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BU of 7tuu by Molmil
Structure of the SARS-CoV-2 main protease in complex with halicin
Descriptor: 3C-like proteinase nsp5, 5-nitro-1,3-thiazole
Authors:Yang, K.S, Liu, W.R.
Deposit date:2022-02-03
Release date:2022-08-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Repurposing Halicin as a potent covalent inhibitor for the SARS-CoV-2 main protease.
Curr Res Chem Biol, 2, 2022
8T3L
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BU of 8t3l by Molmil
TRPV1 in nanodisc bound with 2 LPA molecules in neighboring monomers
Descriptor: (2R)-2-hydroxy-3-(phosphonooxy)propyl tetradecanoate, (2R)-3-{[(R)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dioctadecanoate, SODIUM ION, ...
Authors:Arnold, W.R, Julius, D, Cheng, Y.
Deposit date:2023-06-07
Release date:2024-05-08
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of TRPV1 modulation by endogenous bioactive lipids.
Nat.Struct.Mol.Biol., 31, 2024
8T0C
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BU of 8t0c by Molmil
TRPV1 in Nanodisc bound with lysophosphatidic acid in all four monomers
Descriptor: (2R)-2-hydroxy-3-(phosphonooxy)propyl tetradecanoate, SODIUM ION, Transient receptor potential cation channel subfamily V member 1
Authors:Arnold, W.R, Cheng, Y.
Deposit date:2023-05-31
Release date:2024-05-08
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis of TRPV1 modulation by endogenous bioactive lipids.
Nat.Struct.Mol.Biol., 31, 2024
8T0E
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BU of 8t0e by Molmil
TRPV1 in Nanodisc not bound with lysophosphatidic acid (apo)
Descriptor: (2R)-3-{[(R)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dioctadecanoate, SODIUM ION, Transient receptor potential cation channel subfamily V member 1
Authors:Arnold, W.R, Cheng, Y.
Deposit date:2023-05-31
Release date:2024-05-08
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of TRPV1 modulation by endogenous bioactive lipids.
Nat.Struct.Mol.Biol., 31, 2024
8T10
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BU of 8t10 by Molmil
TRPV1 in nanodisc bound with two LPA molecules in opposite monomers
Descriptor: (2R)-2-hydroxy-3-(phosphonooxy)propyl tetradecanoate, (2R)-3-{[(R)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dioctadecanoate, SODIUM ION, ...
Authors:Arnold, W.R, Julius, D, Cheng, Y.
Deposit date:2023-06-01
Release date:2024-05-08
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of TRPV1 modulation by endogenous bioactive lipids.
Nat.Struct.Mol.Biol., 31, 2024
8T3M
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BU of 8t3m by Molmil
TRPV1 in nanodisc bound with 3 LPA molecules
Descriptor: (2R)-2-hydroxy-3-(phosphonooxy)propyl tetradecanoate, SODIUM ION, Transient receptor potential cation channel subfamily V member 1, ...
Authors:Arnold, W.R, Julius, D, Cheng, Y.
Deposit date:2023-06-07
Release date:2024-05-08
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis of TRPV1 modulation by endogenous bioactive lipids.
Nat.Struct.Mol.Biol., 31, 2024
8T0Y
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BU of 8t0y by Molmil
TRPV1 in nanodisc bound with one LPA in one monomer
Descriptor: (2R)-2-hydroxy-3-(phosphonooxy)propyl tetradecanoate, (2R)-3-{[(R)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dioctadecanoate, SODIUM ION, ...
Authors:Arnold, W.R, Cheng, Y.
Deposit date:2023-06-01
Release date:2024-05-08
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis of TRPV1 modulation by endogenous bioactive lipids.
Nat.Struct.Mol.Biol., 31, 2024
2NRL
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BU of 2nrl by Molmil
Blackfin tuna myoglobin
Descriptor: 1,2-ETHANEDIOL, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Schreiter, E.R, Rodr guez, M.M, Weichsel, A, Montfort, W.R, Bonaventura, J.
Deposit date:2006-11-02
Release date:2007-05-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.91 Å)
Cite:S-nitrosylation-induced conformational change in blackfin tuna myoglobin.
J.Biol.Chem., 282, 2007

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