Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12479 results

1RL1
DownloadVisualize
BU of 1rl1 by Molmil
Solution structure of human Sgt1 CS domain
Descriptor: Suppressor of G2 allele of SKP1 homolog
Authors:Lee, Y.-T, Jacob, J, Michowski, W, Nowotny, M, Kuznicki, J, Chazin, W.J.
Deposit date:2003-11-24
Release date:2004-05-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Human Sgt1 Binds HSP90 through the CHORD-Sgt1 Domain and Not the Tetratricopeptide Repeat Domain
J.Biol.Chem., 279, 2004
2PBF
DownloadVisualize
BU of 2pbf by Molmil
Crystal structure of a putative protein-L-isoaspartate O-methyltransferase beta-aspartate methyltransferase (PCMT) from Plasmodium falciparum in complex with S-adenosyl-L-homocysteine
Descriptor: Protein-L-isoaspartate O-methyltransferase beta-aspartate methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Wernimont, A.K, Hassanali, A, Lin, L, Lew, J, Zhao, Y, Ravichandran, M, Wasney, G, Vedadi, M, Kozieradzki, I, Bochkarev, A, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Hui, R, Qiu, W, Structural Genomics Consortium (SGC)
Deposit date:2007-03-28
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a putative protein-L-isoaspartate O-methyltransferase beta-aspartate methyltransferase (PCMT) from Plasmodium falciparum in complex with S-adenosyl-L-homocysteine
To be Published
2PBX
DownloadVisualize
BU of 2pbx by Molmil
Vibrio cholerae HapR
Descriptor: Hemagglutinin/protease regulatory protein
Authors:Kull, F.J, DeSilva, R.S, Kovacikova, G, Lin, W, Taylor, R.K, Skorupski, K.
Deposit date:2007-03-29
Release date:2007-10-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the Vibrio cholerae Quorum-Sensing Regulatory Protein HapR
J.BACTERIOL., 189, 2007
3NGN
DownloadVisualize
BU of 3ngn by Molmil
Crystal structure of the human CNOT6L nuclease domain in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, CCR4-NOT transcription complex subunit 6-like
Authors:Wang, H, Morita, M, Yang, W, Bartlam, M, Yamamoto, T, Rao, Z.
Deposit date:2010-06-12
Release date:2010-07-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the human CNOT6L nuclease domain reveals strict poly(A) substrate specificity.
Embo J., 2010
2P1U
DownloadVisualize
BU of 2p1u by Molmil
Crystal structure of the ligand binding domain of the retinoid X receptor alpha in complex with 3-(2'-ethoxy)-tetrahydronaphtyl cinnamic acid and a fragment of the coactivator TIF-2
Descriptor: (2E)-3-[3-(3-ETHOXY-5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRONAPHTHALEN-2-YL)-4-HYDROXYPHENYL]ACRYLIC ACID, Nuclear receptor coactivator 2 peptide, Retinoic acid receptor RXR-alpha
Authors:Bourguet, W, Nahoum, V.
Deposit date:2007-03-06
Release date:2007-10-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Modulators of the structural dynamics of the retinoid X receptor to reveal receptor function.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2PER
DownloadVisualize
BU of 2per by Molmil
Crystal Structure of Human Chloride Intracellular Channel protein 2
Descriptor: 5-MERCAPTO-2-NITRO-BENZOIC ACID, Chloride intracellular channel protein 2
Authors:Su, X.D, Liang, Y.H, Mi, W.
Deposit date:2007-04-03
Release date:2008-03-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of human chloride intracellular channel protein 2: A disulfide bond with functional implications.
Proteins, 71, 2008
2P3N
DownloadVisualize
BU of 2p3n by Molmil
Thermotoga maritima IMPase TM1415
Descriptor: Inositol-1-monophosphatase, MAGNESIUM ION
Authors:Stieglitz, K.A, Roberts, M.F, Li, W, Stec, B.
Deposit date:2007-03-09
Release date:2007-04-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the tetrameric inositol 1-phosphate phosphatase (TM1415) from the hyperthermophile, Thermotoga maritima.
Febs J., 274, 2007
1RRV
DownloadVisualize
BU of 1rrv by Molmil
X-ray crystal structure of TDP-vancosaminyltransferase GtfD as a complex with TDP and the natural substrate, desvancosaminyl vancomycin.
Descriptor: DESVANCOSAMINYL VANCOMYCIN, GLYCEROL, GLYCOSYLTRANSFERASE GTFD, ...
Authors:Mulichak, A.M, Lu, W, Losey, H.C, Walsh, C.T, Garavito, R.M.
Deposit date:2003-12-09
Release date:2004-05-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Vancosaminyltransferase Gtfd from the Vancomycin Biosynthetic Pathway: Interactions with Acceptor and Nucleotide Ligands
Biochemistry, 43, 2004
1R33
DownloadVisualize
BU of 1r33 by Molmil
Golgi alpha-mannosidase II complex with 5-thio-D-mannopyranosylamine
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-thio-alpha-D-mannopyranosylamine, ...
Authors:Kuntz, D.A, Xin, W, Kavelekar, L.M, Rose, D.R, Pinto, B.M.
Deposit date:2003-09-30
Release date:2004-11-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:5-Thio-d-glycopyranosylamines and their amidinium salts as potential transition-state mimics of glycosyl hydrolases: synthesis, enzyme inhibitory activities, X-ray crystallography, and molecular modeling
TETRAHEDRON ASYMMETRY, 16, 2005
5UED
DownloadVisualize
BU of 5ued by Molmil
RNA primer-template complex with guanosine dinucleotide ligand G(5')pp(5')G
Descriptor: RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*GP*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3'), [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Zhang, W, Tam, C.P, Szostak, J.W.
Deposit date:2017-01-01
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Insight into the mechanism of nonenzymatic RNA primer extension from the structure of an RNA-GpppG complex.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UBL
DownloadVisualize
BU of 5ubl by Molmil
A circularly permuted version of PvdQ (cpPvdQ)
Descriptor: Acyl-homoserine lactone acylase PvdQ
Authors:Wu, R, Mascarenhas, R, Catlin, D, Clevenger, K, Fast, W, Liu, D.
Deposit date:2016-12-20
Release date:2017-03-01
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Circular Permutation Reveals a Chromophore Precursor Binding Pocket of the Siderophore Tailoring Enzyme PvdQ
To Be Published
1R5P
DownloadVisualize
BU of 1r5p by Molmil
Crystal Structure Analysis of KaiB from PCC7120
Descriptor: circadian oscillation regulator
Authors:Garces, R.G, Wu, N, Gillon, W, Pai, E.F.
Deposit date:2003-10-12
Release date:2004-05-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Anabaena circadian clock proteins KaiA and KaiB reveal a potential common binding site to their partner KaiC
Embo J., 23, 2004
3TA2
DownloadVisualize
BU of 3ta2 by Molmil
A. fulgidus GlnK3, MgATP/2-OG complex
Descriptor: 2-OXOGLUTARIC ACID, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Maier, S, Schleberger, P, Lue, W, Wacker, T, Pflueger, T, Litz, C, Andrade, S.L.A.
Deposit date:2011-08-03
Release date:2011-10-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of disruption of the Amt-GlnK complex by P(II)-mediated sensing of 2-oxoglutarate.
Plos One, 6, 2011
2PAQ
DownloadVisualize
BU of 2paq by Molmil
Crystal structure of the 5'-deoxynucleotidase YfbR
Descriptor: 5'-deoxynucleotidase YfbR
Authors:Zimmerman, M.D, Chruszcz, M, Cymborowski, M, Kudritska, M, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-03-27
Release date:2007-04-10
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into the mechanism of substrate specificity and catalytic activity of an HD-domain phosphohydrolase: the 5'-deoxyribonucleotidase YfbR from Escherichia coli.
J.Mol.Biol., 378, 2008
5UHG
DownloadVisualize
BU of 5uhg by Molmil
Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-AAP1 and Rifampin
Descriptor: DNA (5'-D(*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*CP*AP*GP*G)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Lin, W, Das, K, Feng, Y, Ebright, R.H.
Deposit date:2017-01-11
Release date:2017-04-12
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.971 Å)
Cite:Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition.
Mol. Cell, 66, 2017
3NJ6
DownloadVisualize
BU of 3nj6 by Molmil
0.95 A resolution X-ray structure of (GGCAGCAGCC)2
Descriptor: 5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3', SULFATE ION
Authors:Kiliszek, A, Kierzek, R, Krzyzosiak, W.J, Rypniewski, W.
Deposit date:2010-06-17
Release date:2010-08-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Atomic resolution structure of CAG RNA repeats: structural insights and implications for the trinucleotide repeat expansion diseases.
Nucleic Acids Res., 38, 2010
1R9Q
DownloadVisualize
BU of 1r9q by Molmil
structure analysis of ProX in complex with proline betaine
Descriptor: 1,1-DIMETHYL-PROLINIUM, Glycine betaine-binding periplasmic protein, UNKNOWN ATOM OR ION
Authors:Schiefner, A, Breed, J, Bosser, L, Kneip, S, Gade, J, Holtmann, G, Diederichs, K, Welte, W, Bremer, E.
Deposit date:2003-10-30
Release date:2004-02-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Cation-pi Interactions as Determinants for Binding of the Compatible Solutes Glycine Betaine and Proline Betaine by the Periplasmic Ligand-binding Protein ProX from Escherichia coli
J.BIOL.CHEM., 279, 2004
2PD0
DownloadVisualize
BU of 2pd0 by Molmil
Protein cgd2_2020 from Cryptosporidium parvum
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Hypothetical protein
Authors:Cymborowski, M, Chruszcz, M, Hills, T, Lew, J, Melone, M, Zhao, Y, Artz, J, Wernimont, A, Edwards, A, Sundstrom, M, Weigelt, J, Bochkarev, A, Arrowsmith, C, Hui, R, Minor, W, Structural Genomics Consortium (SGC)
Deposit date:2007-03-30
Release date:2007-04-17
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Protein cgd2_2020 from Cryptosporidium parvum
To be Published
3T2B
DownloadVisualize
BU of 3t2b by Molmil
Fructose-1,6-bisphosphate aldolase/phosphatase from Thermoproteus neutrophilus, ligand free
Descriptor: Fructose-1,6-bisphosphate aldolase/phosphatase, MAGNESIUM ION
Authors:Du, J, Say, R, Lue, W, Fuchs, G, Einsle, O.
Deposit date:2011-07-22
Release date:2011-10-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Active-site remodelling in the bifunctional fructose-1,6-bisphosphate aldolase/phosphatase.
Nature, 478, 2011
4P8U
DownloadVisualize
BU of 4p8u by Molmil
The crystal structures of YKL-39 in the absence of chitooligosaccharides was solved to resolutions of 2.4 angstrom
Descriptor: Chitinase-3-like protein 2, DI(HYDROXYETHYL)ETHER, SULFATE ION
Authors:Suginta, W, Ranok, A, Robinson, R.C, Wongsantichon, J.
Deposit date:2014-04-01
Release date:2014-10-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and Thermodynamic Insights into Chitooligosaccharide Binding to Human Cartilage Chitinase 3-like Protein 2 (CHI3L2 or YKL-39).
J.Biol.Chem., 290, 2015
5UFL
DownloadVisualize
BU of 5ufl by Molmil
Crystal structure of a CIP2A core domain
Descriptor: Protein CIP2A, ZINC ION
Authors:Wang, Z, Wang, J, Rao, Z, Xu, W.
Deposit date:2017-01-04
Release date:2017-02-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Oncoprotein CIP2A is stabilized via interaction with tumor suppressor PP2A/B56.
EMBO Rep., 18, 2017
5UGU
DownloadVisualize
BU of 5ugu by Molmil
Crystal structure of M. tuberculosis InhA inhibited by PT506
Descriptor: 2-[4-[(4-cyclopropyl-1,2,3-triazol-1-yl)methyl]-2-oxidanyl-phenoxy]benzenecarbonitrile, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Eltschkner, S, Pschibul, A, Spagnuolo, L.A, Yu, W, Tonge, P.J, Kisker, C.
Deposit date:2017-01-10
Release date:2017-02-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Evaluating the Contribution of Transition-State Destabilization to Changes in the Residence Time of Triazole-Based InhA Inhibitors.
J. Am. Chem. Soc., 139, 2017
1RHX
DownloadVisualize
BU of 1rhx by Molmil
HIGH-RESOLUTION NMR STRUCTURE OF A PUTATIVE SULFUR TRANSFERASE (TM0979) FROM THERMOTOGA MARITIMA
Descriptor: conserved hypothetical protein TM0979
Authors:Peti, W, Herrmann, T, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2003-11-14
Release date:2004-12-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the conserved hypothetical protein TM0979 from Thermotoga maritima.
Proteins, 59, 2005
5UH6
DownloadVisualize
BU of 5uh6 by Molmil
Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntRNA in complex with Rifampin
Descriptor: DNA (5'-D(*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*CP*AP*GP*G)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*G)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Lin, W, Das, K, Feng, Y, Ebright, R.H.
Deposit date:2017-01-11
Release date:2017-04-12
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3.837 Å)
Cite:Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition.
Mol. Cell, 66, 2017
3NJ7
DownloadVisualize
BU of 3nj7 by Molmil
1.9 A resolution X-ray structure of (GGCAGCAGCC)2
Descriptor: 5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3', SULFATE ION
Authors:Kiliszek, A, Kierzek, R, Krzyzosiak, W.J, Rypniewski, W.
Deposit date:2010-06-17
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.904 Å)
Cite:Atomic resolution structure of CAG RNA repeats: structural insights and implications for the trinucleotide repeat expansion diseases.
Nucleic Acids Res., 38, 2010

222415

數據於2024-07-10公開中

PDB statisticsPDBj update infoContact PDBjnumon