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PDB: 12479 results

7YBJ
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BU of 7ybj by Molmil
SARS-CoV-2 Mu variant spike(close state)
Descriptor: Spike glycoprotein
Authors:Wang, X, Fu, W.
Deposit date:2022-06-29
Release date:2023-07-12
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:SARS-CoV-2 lambda variant spike
To Be Published
7YBI
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BU of 7ybi by Molmil
SARS-CoV-2 Mu variant spike (open state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-06-29
Release date:2023-07-12
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:SARS-CoV-2 lambda variant spike
To Be Published
1MZP
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BU of 1mzp by Molmil
Structure of the L1 protuberance in the ribosome
Descriptor: 50s ribosomal protein L1P, MAGNESIUM ION, fragment of 23S rRNA
Authors:Nikulin, A, Eliseikina, I, Tishchenko, S, Nevskaya, N, Davydova, N, Platonova, O, Piendl, W, Selmer, M, Liljas, A, Zimmermann, R, Garber, M, Nikonov, S.
Deposit date:2002-10-09
Release date:2003-01-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of the L1 protuberance in the ribosome.
Nat.Struct.Biol., 10, 2003
3HZ3
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BU of 3hz3 by Molmil
Lactobacillus reuteri N-terminally truncated glucansucrase GTF180(D1025N)-sucrose complex
Descriptor: CALCIUM ION, Glucansucrase, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Vujicic-Zagar, A, Pijning, T, Kralj, S, Eeuwema, W, Dijkhuizen, L, Dijkstra, B.W.
Deposit date:2009-06-23
Release date:2010-06-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure of a 117 kDa glucansucrase fragment provides insight into evolution and product specificity of GH70 enzymes
Proc.Natl.Acad.Sci.USA, 107, 2010
7YD2
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BU of 7yd2 by Molmil
SulE_P44R_S209A
Descriptor: 2-[(4-chloranyl-6-methoxy-pyrimidin-2-yl)carbamoylsulfamoyl]benzoic acid, 2-[[[[(4-CHLORO-6-METHOXY-2-PYRIMIDINYL)AMINO]CARBONYL]AMINO]SULFONYL]BENZOIC ACID ETHYL ESTER, Alpha/beta fold hydrolase, ...
Authors:Liu, B, Ran, T, Wang, W, He, J.
Deposit date:2022-07-03
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Crystal structures of herbicide-detoxifying esterase reveal a lid loop affecting substrate binding and activity.
Nat Commun, 14, 2023
7YKP
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BU of 7ykp by Molmil
Crystal structure of a novel alpha/beta hydrolase from thermomonospora curvata with glycerol
Descriptor: GLYCEROL, Triacylglycerol lipase
Authors:Han, X, Jian, G, Bornscheuer, U.T, Wei, R, Liu, W.
Deposit date:2022-07-23
Release date:2023-07-26
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Crystal structure of a novel alpha/beta hydrolase from thermomonospora curvata with glycerol
To Be Published
7YKO
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BU of 7yko by Molmil
Crystal structure of a novel alpha/beta hydrolase mutant from thermomonospora curvata in complex with pentane-1,5-diol
Descriptor: Triacylglycerol lipase, pentane-1,5-diol
Authors:Han, X, Jian, G, Bornscheuer, U.T, Wei, R, Liu, W.
Deposit date:2022-07-23
Release date:2023-07-26
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of a novel alpha/beta hydrolase mutant from thermomonospora curvata in complex with pentane-1,5-diol
To Be Published
7YKQ
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BU of 7ykq by Molmil
Crystal structure of a novel alpha/beta hydrolase mutant from thermomonospora curvata in apo form
Descriptor: Triacylglycerol lipase
Authors:Han, X, Jian, G, Bornscheuer, U.T, Wei, R, Liu, W.
Deposit date:2022-07-23
Release date:2023-07-26
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Crystal structure of a novel alpha/beta hydrolase mutant from thermomonospora curvata in apo form
To Be Published
1NE9
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BU of 1ne9 by Molmil
Crystal Structure of Weissella viridescens FemX at 1.7 Ang Resolution
Descriptor: FemX, MAGNESIUM ION
Authors:Biarrotte-Sorin, S, Maillard, A.P, Delettre, J, Sougakoff, W, Arthur, M, Mayer, C.
Deposit date:2002-12-11
Release date:2004-02-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of Weissella viridescens FemX and its complex with UDP-MurNAc-pentapeptide: insights into FemABX family substrates recognition.
Structure, 12, 2004
3E57
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BU of 3e57 by Molmil
Crystal structure of Tm1382, a putative Nudix hydrolase
Descriptor: uncharacterized protein Tm1382
Authors:Choi, W, Cooper, D.R, Derewenda, Z.S, Integrated Center for Structure and Function Innovation (ISFI)
Deposit date:2008-08-13
Release date:2008-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of Tm1382, a putative Nudix hydrolase
To be Published
7Y0L
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BU of 7y0l by Molmil
SulE-S209A
Descriptor: Alpha/beta fold hydrolase, GLYCEROL, METHYL 2-[({[(4-METHOXY-6-METHYL-1,3,5-TRIAZIN-2-YL)AMINO]CARBONYL}AMINO)SULFONYL]BENZOATE
Authors:Liu, B, Ran, T, He, J, Wang, W.
Deposit date:2022-06-05
Release date:2023-08-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Crystal structures of herbicide-detoxifying esterase reveal a lid loop affecting substrate binding and activity.
Nat Commun, 14, 2023
3HTT
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BU of 3htt by Molmil
The hemagglutinin structure of an avian H1N1 influenza A virus in complex with 2,3-sialyllactose
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Wang, G, Li, A, Zhang, Q, Wu, C, Zhang, R, Cai, Q, Song, W, Yuen, K.-Y.
Deposit date:2009-06-12
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The hemagglutinin structure of an avian H1N1 influenza A virus
Virology, 392, 2009
1NHI
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BU of 1nhi by Molmil
Crystal structure of N-terminal 40KD MutL (LN40) complex with ADPnP and one potassium
Descriptor: 1,2-ETHANEDIOL, DNA mismatch repair protein mutL, MAGNESIUM ION, ...
Authors:Hu, X, Machius, M, Yang, W.
Deposit date:2002-12-19
Release date:2003-06-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Monovalent cation dependence and preference of GHKL ATPases and kinases
FEBS Lett., 544, 2003
3E7N
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BU of 3e7n by Molmil
Crystal structure of d-ribose high-affinity transport system from salmonella typhimurium lt2
Descriptor: 1,2-ETHANEDIOL, D-ribose high-affinity transport system
Authors:Nocek, B, Maltseva, N, Gu, M, Joachimiak, A, Anderson, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-08-18
Release date:2008-08-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of d-ribose high-affinity transport system from salmonella typhimurium lt2
To be Published
7YB4
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BU of 7yb4 by Molmil
Solution structure of homeodomain of EXTRADENTICLE
Descriptor: Homeobox protein extradenticle
Authors:Acharya, B, Basak, A.J, Lee, W, De, S.
Deposit date:2022-06-28
Release date:2023-07-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of homeodomain of EXTRADENTICLE
To Be Published
7YBL
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BU of 7ybl by Molmil
SARS-CoV-2 B.1.620 variant spike (close state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-06-29
Release date:2023-08-09
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structures of SARS-CoV-2 spike protein alert noteworthy sites for the potential approaching variants.
Virol Sin, 37, 2022
7YLQ
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BU of 7ylq by Molmil
Crystal structure of Microcystinase C from Sphingomonas sp. ACM-3962 at 2.6 A resolution
Descriptor: CALCIUM ION, Microcystinase C, ZINC ION
Authors:Guo, X, Li, Z, Ding, W, Yin, P, Feng, L.
Deposit date:2022-07-26
Release date:2023-08-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Crystal structure of Microcystin C from Sphingomonas sp. ACM-3962 at 2.6 A resolution
To Be Published
3E7B
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BU of 3e7b by Molmil
Crystal Structure of Protein Phosphatase-1 Bound to the natural toxin inhibitor Tautomycin
Descriptor: (2Z)-2-[(1R)-3-{[(1R,2S,3R,6S,7S,10R)-10-{(2S,3S,6R,8S,9R)-3,9-dimethyl-8-[(3S)-3-methyl-4-oxopentyl]-1,7-dioxaspiro[5.5]undec-2-yl}-3,7-dihydroxy-2-methoxy-6-methyl-1-(1-methylethyl)-5-oxoundecyl]oxy}-1-hydroxy-3-oxopropyl]-3-methylbut-2-enedioic acid, AZIDE ION, CHLORIDE ION, ...
Authors:Kelker, M.S, Page, R, Peti, W.
Deposit date:2008-08-18
Release date:2008-11-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of protein phosphatase-1 bound to nodularin-R and tautomycin: a novel scaffold for structure-based drug design of serine/threonine phosphatase inhibitors
J.Mol.Biol., 385, 2009
7YBK
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BU of 7ybk by Molmil
SARS-CoV-2 B.1.620 variant spike (open state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-06-29
Release date:2023-09-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structures of SARS-CoV-2 spike protein alert noteworthy sites for the potential approaching variants.
Virol Sin, 37, 2022
7YBH
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BU of 7ybh by Molmil
SARS-CoV-2 lambda variant spike
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-06-29
Release date:2023-08-09
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of SARS-CoV-2 spike protein alert noteworthy sites for the potential approaching variants.
Virol Sin, 37, 2022
7YBM
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BU of 7ybm by Molmil
SARS-CoV-2 C.1.2 variant spike (Close state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, X, Fu, W.
Deposit date:2022-06-29
Release date:2023-08-09
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structures of SARS-CoV-2 spike protein alert noteworthy sites for the potential approaching variants.
Virol Sin, 37, 2022
3ECI
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BU of 3eci by Molmil
Microtubule-associated protein 1 light chain 3 alpha isoform A (MAP1ALC3)
Descriptor: Microtubule-associated protein 1 light chain 3 alpha
Authors:Walker, J.R, Davis, T.L, Mujib, S, Butler-Cole, C, Tempel, W, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Botchkarev, A, Dhe-Paganon, S.
Deposit date:2008-08-30
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Human Autophagy-Related Protein LC3 A
To be Published
7Y53
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BU of 7y53 by Molmil
The cryo-EM structure of human ERAD retro-translocation complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Derlin-1, Transitional endoplasmic reticulum ATPase
Authors:Cao, Y, Rao, B, Wang, Q, Yao, D, Xia, Y, Li, W, Li, S, Shen, Y.
Deposit date:2022-06-16
Release date:2023-10-18
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:The cryo-EM structure of the human ERAD retrotranslocation complex.
Sci Adv, 9, 2023
3EGG
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BU of 3egg by Molmil
Crystal structure of a complex between Protein Phosphatase 1 alpha (PP1) and the PP1 binding and PDZ domains of Spinophilin
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MANGANESE (II) ION, ...
Authors:Ragusa, M.J, Page, R, Peti, W.
Deposit date:2008-09-10
Release date:2010-03-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Spinophilin directs protein phosphatase 1 specificity by blocking substrate binding sites.
Nat.Struct.Mol.Biol., 17, 2010
7Y59
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BU of 7y59 by Molmil
The cryo-EM structure of human ERAD retro-translocation complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Derlin-1, ...
Authors:Cao, Y, Rao, B, Wang, Q, Yao, D, Xia, Y, Li, W, Li, S, Shen, Y.
Deposit date:2022-06-16
Release date:2023-10-18
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (4.51 Å)
Cite:The cryo-EM structure of the human ERAD retrotranslocation complex.
Sci Adv, 9, 2023

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