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PDB: 12521 件

3JUI
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Crystal Structure of the C-terminal Domain of Human Translation Initiation Factor eIF2B epsilon Subunit
分子名称: GLYCEROL, Translation initiation factor eIF-2B subunit epsilon
著者Wei, J, Xu, H, Zhang, C, Wang, M, Gao, F, Gong, W.
登録日2009-09-15
公開日2009-10-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the C-terminal Domain of Human Translation Initiation Factor eIF2B epsilon Subunit
To be published
8V6Q
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Crystal structure of EcThsA in ligand-free state
分子名称: Thoeris protein ThsA Macro domain-containing protein
著者Shi, Y, Masic, V, Mosaiab, T, Goulart, C.C, Hartley-Tassell, L, Sorbello, M, Vasquez, V, Mishra, B.P, Holt, S, Gu, W, Kobe, B, Ve, T.
登録日2023-12-02
公開日2024-06-12
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Structural characterization of macro domain-containing Thoeris antiphage defense systems.
Sci Adv, 10, 2024
8V6S
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Crystal structure of PcThsA in complex with Imidazole Adenine Dinucleotide
分子名称: Thoeris protein ThsA Macro domain-containing protein, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-imidazol-1-yl-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
著者Shi, Y, Masic, V, Mosaiab, T, Goulart, C.C, Hartley-Tassell, L, Sorbello, M, Vasquez, E, Mishra, B.P, Holt, S, Gu, W, Kobe, B, Ve, T.
登録日2023-12-02
公開日2024-06-12
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural characterization of macro domain-containing Thoeris antiphage defense systems.
Sci Adv, 10, 2024
4QAU
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Crystal structure of F43Y mutant of sperm whale myoglobin
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Lin, Y, Tan, X, Li, W.
登録日2014-05-06
公開日2015-01-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.597 Å)
主引用文献A Novel Tyrosine-Heme C-O Covalent Linkage in F43Y Myoglobin: A New Post-translational Modification of Heme Proteins
Chembiochem, 16, 2015
8V6T
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Crystal structure of EcThsB2
分子名称: BROMIDE ION, Molecular chaperone Tir
著者Shi, Y, Masic, V, Mosaiab, T, Goulart, C.C, Hartley-Tassell, L, Sorbello, M, Vasquez, E, Mishra, B.P, Holt, S, Gu, W, Kobe, B, Ve, T.
登録日2023-12-02
公開日2024-06-12
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural characterization of macro domain-containing Thoeris antiphage defense systems.
Sci Adv, 10, 2024
8V6R
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Crystal structure of EcThsA in complex with ADPR
分子名称: Thoeris protein ThsA Macro domain-containing protein, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Shi, Y, Masic, V, Mosaiab, T, Goulart, C.C, Hartley-Tassell, L, Sorbello, M, Vasquez, E, Mishra, B.P, Holt, S, Gu, W, Kobe, B, Ve, T.
登録日2023-12-02
公開日2024-06-12
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structural characterization of macro domain-containing Thoeris antiphage defense systems.
Sci Adv, 10, 2024
3KJF
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Caspase 3 Bound to a covalent inhibitor
分子名称: (3S)-3-({[(5S,10aS)-2-{(2S)-4-carboxy-2-[(phenylacetyl)amino]butyl}-1,3-dioxo-2,3,5,7,8,9,10,10a-octahydro-1H-[1,2,4]triazolo[1,2-a]cinnolin-5-yl]carbonyl}amino)-4-oxopentanoic acid, Caspase-3
著者Kamtekar, S, Watt, W, Finzel, B.C, Harris, M.S, Blinn, J, Wang, Z, Tomasselli, A.G.
登録日2009-11-03
公開日2010-08-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Kinetic and structural characterization of caspase-3 and caspase-8 inhibition by a novel class of irreversible inhibitors.
Biochim.Biophys.Acta, 1804, 2010
3KJN
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Caspase 8 bound to a covalent inhibitor
分子名称: (3S)-3-({[(5S)-2-{2-[(1H-benzimidazol-5-ylcarbonyl)amino]ethyl}-7-(cyclohexylmethyl)-1,3-dioxo-2,3,5,8-tetrahydro-1H-[1,2,4]triazolo[1,2-a]pyridazin-5-yl]carbonyl}amino)-4-oxopentanoic acid, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Caspase-8
著者Kamtekar, S, Watt, W, Finzel, B.C, Harris, M.S, Blinn, J, Wang, Z, Tomasselli, A.G.
登録日2009-11-03
公開日2010-08-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Kinetic and structural characterization of caspase-3 and caspase-8 inhibition by a novel class of irreversible inhibitors.
Biochim.Biophys.Acta, 1804, 2010
3KH4
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Crystal structure of human Cu/Zn superoxide dismutase recombinantly produced in Leishmania tarantolae; P6522 crystal form containing 6 chains in the asymmetric unit
分子名称: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
著者Gazdag, E.M, Blankenfeldt, W.
登録日2009-10-30
公開日2010-08-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Purification and crystallization of human Cu/Zn superoxide dismutase recombinantly produced in the protozoan Leishmania tarentolae.
Acta Crystallogr.,Sect.F, 66, 2010
3KLK
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Crystal structure of Lactobacillus reuteri N-terminally truncated glucansucrase GTF180 in triclinic apo- form
分子名称: CALCIUM ION, GLYCEROL, Glucansucrase
著者Vujicic-Zagar, A, Pijning, T, Kralj, S, Eeuwema, W, Dijkhuizen, L, Dijkstra, B.W.
登録日2009-11-08
公開日2010-11-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of a 117 kDa glucansucrase fragment provides insight into evolution and product specificity of GH70 enzymes
Proc.Natl.Acad.Sci.USA, 107, 2010
3KBH
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Crystal structure of NL63 respiratory coronavirus receptor-binding domain complexed with its human receptor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike glycoprotein
著者Wu, K, Li, W, Peng, G, Li, F.
登録日2009-10-20
公開日2009-12-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Crystal structure of NL63 respiratory coronavirus receptor-binding domain complexed with its human receptor.
Proc.Natl.Acad.Sci.USA, 106, 2009
3KMR
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Crystal structure of RARalpha ligand binding domain in complex with an agonist ligand (Am580) and a coactivator fragment
分子名称: 4-{[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbonyl]amino}benzoic acid, Nuclear receptor coactivator 1, Retinoic acid receptor alpha
著者Bourguet, W, Teyssier, C.
登録日2009-11-11
公開日2010-06-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A unique secondary-structure switch controls constitutive gene repression by retinoic acid receptor.
Nat.Struct.Mol.Biol., 17, 2010
3KEF
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Crystal structure of IspH:DMAPP-complex
分子名称: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, DIMETHYLALLYL DIPHOSPHATE, FE3-S4 CLUSTER
著者Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
登録日2009-10-26
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
8U45
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Crystal Structure Analysis of Aspergillus fumigatus alkaline protease
分子名称: Alkaline protease 1, CALCIUM ION, CHLORIDE ION, ...
著者Fernandez, D, Diec, D.D.L, Guo, W, Russi, S.
登録日2023-09-08
公開日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Targeting Aspergillus allergen oryzin with a chemical probe at atomic precision.
Sci Rep, 13, 2023
4Q96
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CID of human RPRD1B in complex with an unmodified CTD peptide
分子名称: RPB1-CTD, Regulation of nuclear pre-mRNA domain-containing protein 1B, SULFATE ION, ...
著者Ni, Z, Xu, C, Tempel, W, El Bakkouri, M, Loppnau, P, Guo, X, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Greenblatt, J.F, Structural Genomics Consortium (SGC)
登録日2014-04-29
公開日2014-06-04
最終更新日2014-08-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献RPRD1A and RPRD1B are human RNA polymerase II C-terminal domain scaffolds for Ser5 dephosphorylation.
Nat.Struct.Mol.Biol., 21, 2014
4PW8
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Human tryptophan 2,3-dioxygenase
分子名称: COBALT (II) ION, Tryptophan 2,3-dioxygenase
著者Meng, B, Wu, D, Gu, J.H, Ouyang, S.Y, Ding, W, Liu, Z.J.
登録日2014-03-19
公開日2014-08-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献Structural and functional analyses of human tryptophan 2,3-dioxygenase
Proteins, 82, 2014
3KEM
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Crystal structure of IspH:IPP complex
分子名称: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, FE3-S4 CLUSTER
著者Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
登録日2009-10-26
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KE9
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Crystal structure of IspH:Intermediate-complex
分子名称: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
著者Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
登録日2009-10-24
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KEL
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Crystal Structure of IspH:PP complex
分子名称: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, FE3-S4 CLUSTER, PYROPHOSPHATE 2-
著者Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
登録日2009-10-26
公開日2010-01-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
8U5G
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Crystal structure of the co-expressed SDS22:PP1:I3 complex
分子名称: E3 ubiquitin-protein ligase PPP1R11, FE (III) ION, PHOSPHATE ION, ...
著者Choy, M.S, Peti, W, Page, R.
登録日2023-09-12
公開日2023-12-06
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The SDS22:PP1:I3 complex: SDS22 binding to PP1 loosens the active site metal to prime metal exchange.
J.Biol.Chem., 300, 2023
4QE9
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Open MthK pore structure soaked in 10 mM Ba2+/100 mM K+
分子名称: Calcium-gated potassium channel MthK, POTASSIUM ION
著者Guo, R, Zeng, W, Cui, H, Chen, L, Ye, S.
登録日2014-05-15
公開日2014-07-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Ionic interactions of Ba2+ blockades in the MthK K+ channel
J.Gen.Physiol., 144, 2014
4QGM
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Acireductone dioxygenase from Bacillus anthracis with cadmium ion in active center
分子名称: Acireductone dioxygenase, CADMIUM ION
著者Milaczewska, A.M, Chruszcz, M, Shabalin, I.G, Cooper, D.R, Borowski, T, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-05-23
公開日2014-06-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Acireductone dioxygenase from Bacillus anthracis with cadmium ion in active center
To be Published
3J7M
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Virus model of brome mosaic virus (first half data set)
分子名称: Capsid protein
著者Wang, Z, Hryc, C, Bammes, B, Afonine, P.V, Jakana, J, Chen, D.H, Liu, X, Baker, M.L, Kao, C, Ludtke, S.J, Schmid, M.F, Adams, P.D, Chiu, W.
登録日2014-07-18
公開日2014-09-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献An atomic model of brome mosaic virus using direct electron detection and real-space optimization.
Nat Commun, 5, 2014
7W1N
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Complex structure of a leaf-branch compost cutinase variant LCC ICCG_KRP
分子名称: 1,2-ETHANEDIOL, BICINE, Leaf-branch compost cutinase
著者Niu, D, Zeng, W, Huang, J.W, Chen, C.C, Liu, W.D, Guo, R.T.
登録日2021-11-19
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Substrate-Binding Mode of a Thermophilic PET Hydrolase and Engineering the Enzyme to Enhance the Hydrolytic Efficacy.
Acs Catalysis, 12, 2022
7WI6
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Cryo-EM structure of LY341495/NAM-bound mGlu3
分子名称: 2-[(1S,2S)-2-carboxycyclopropyl]-3-(9H-xanthen-9-yl)-D-alanine, 2-acetamido-2-deoxy-beta-D-glucopyranose, Metabotropic glutamate receptor 3
著者Fang, W, Yang, F, Xu, C.J, Ling, S.L, Lin, L, Zhou, Y.X, Sun, W.J, Wang, X.M, Liu, P, Rondard, P, Pan, S, Pin, J.P, Tian, C.L, Liu, J.F.
登録日2022-01-03
公開日2022-03-16
最終更新日2022-07-20
実験手法ELECTRON MICROSCOPY (3.71 Å)
主引用文献Structural basis of the activation of metabotropic glutamate receptor 3.
Cell Res., 32, 2022

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