Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 34877 results

8TV8
DownloadVisualize
BU of 8tv8 by Molmil
Crystal structure of nontypeable Haemophilus influenzae SapA
Descriptor: ABC-type transport system, periplasmic component, involved in antimicrobial peptide resistance
Authors:Tanaka, K.J, Buechel, E.R, Rivera, K.G, Pinkett, H.W.
Deposit date:2023-08-17
Release date:2024-01-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Antimicrobial Peptide Recognition Motif of the Substrate Binding Protein SapA from Nontypeable Haemophilus influenzae .
Biochemistry, 63, 2024
3W99
DownloadVisualize
BU of 3w99 by Molmil
Crystal Structure of Human Nucleosome Core Particle lacking H4 N-terminal region
Descriptor: 146-mer DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Iwasaki, W, Miya, Y, Horikoshi, N, Osakabe, A, Tachiwana, H, Shibata, T, Kagawa, W, Kurumizaka, H.
Deposit date:2013-04-01
Release date:2013-08-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Contribution of histone N-terminal tails to the structure and stability of nucleosomes
FEBS Open Bio, 3, 2013
1OAT
DownloadVisualize
BU of 1oat by Molmil
ORNITHINE AMINOTRANSFERASE
Descriptor: ORNITHINE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Shen, B.W, Schirmer, T, Jansonius, J.N.
Deposit date:1997-03-26
Release date:1998-04-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human recombinant ornithine aminotransferase.
J.Mol.Biol., 277, 1998
3W98
DownloadVisualize
BU of 3w98 by Molmil
Crystal Structure of Human Nucleosome Core Particle lacking H3.1 N-terminal region
Descriptor: 146-mer DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ...
Authors:Iwasaki, W, Miya, Y, Horikoshi, N, Osakabe, A, Tachiwana, H, Shibata, T, Kagawa, W, Kurumizaka, H.
Deposit date:2013-04-01
Release date:2013-08-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:Contribution of histone N-terminal tails to the structure and stability of nucleosomes
FEBS Open Bio, 3, 2013
4Q3T
DownloadVisualize
BU of 4q3t by Molmil
Crystal structure of Schistosoma mansoni arginase in complex with inhibitor NOHA
Descriptor: Arginase, GLYCEROL, MANGANESE (II) ION, ...
Authors:Hai, Y, Edwards, J.E, Van Zandt, M.C, Hoffmann, K.F, Christianson, D.W.
Deposit date:2014-04-12
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.142 Å)
Cite:Crystal Structure of Schistosoma mansoni Arginase, a Potential Drug Target for the Treatment of Schistosomiasis.
Biochemistry, 53, 2014
7WHD
DownloadVisualize
BU of 7whd by Molmil
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Zeng, J.W, Wang, X.W, Ge, J.W, Wang, Z.Y.
Deposit date:2021-12-30
Release date:2023-01-18
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:SARS-CoV-2 hijacks neutralizing dimeric IgA for nasal infection and injury in Syrian hamsters 1 .
Emerg Microbes Infect, 12, 2023
8U22
DownloadVisualize
BU of 8u22 by Molmil
A Highly Stable Variant of Corynactis Californica Green Fluorescent Protein, ccGFP 7
Descriptor: Green Fluorescent Protein Variant #7, ccGFP 7
Authors:Hung, L.-W, Terwilliger, T.C, Waldo, G, Nguyen, H.B.
Deposit date:2023-09-05
Release date:2024-01-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Engineering highly stable variants of Corynactis californica green fluorescent proteins.
Protein Sci., 33, 2024
2NPM
DownloadVisualize
BU of 2npm by Molmil
crystal structure of Cryptosporidium parvum 14-3-3 protein in complex with peptide
Descriptor: 14-3-3 domain containing protein, CONSENSUS PEPTIDE FOR 14-3-3 PROTEINS
Authors:Dong, A, Lew, J, Wasney, G, Ren, H, Lin, L, Hassanali, A, Qiu, W, Zhao, Y, Doyle, D, Vedadi, M, Koeieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Brokx, S, Structural Genomics Consortium (SGC)
Deposit date:2006-10-27
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Characterization of 14-3-3 proteins from Cryptosporidium parvum.
Plos One, 6, 2011
1NPC
DownloadVisualize
BU of 1npc by Molmil
THE STRUCTURE OF NEUTRAL PROTEASE FROM BACILLUS CEREUS AT 0.2-NM RESOLUTION
Descriptor: CALCIUM ION, NEUTRAL PROTEASE, ZINC ION
Authors:Stark, W, Pauptit, R.A, Jansonius, J.N.
Deposit date:1992-01-08
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of neutral protease from Bacillus cereus at 0.2-nm resolution.
Eur.J.Biochem., 207, 1992
1DMI
DownloadVisualize
BU of 1dmi by Molmil
BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH 6S-H4B
Descriptor: 6S-5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, CACODYLATE ION, ...
Authors:Raman, C.S, Li, H, Martasek, P, Kotsonis, P, Pfleiderer, W, Schmidt, H.H.H.W, Masters, B.S.S, Poulos, T.L.
Deposit date:1999-12-14
Release date:2000-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with the Pterin Analogues
To be Published
4PEH
DownloadVisualize
BU of 4peh by Molmil
Dbr1 in complex with synthetic linear RNA
Descriptor: GLYCEROL, MANGANESE (II) ION, RNA (5'-R(*CP*UP*AP*(A2P)P*AP*CP*AP*A)-3'), ...
Authors:Montemayor, E.J, Katolik, A, Clark, N.E, Taylor, A.B, Schuermann, J.P, Combs, D.J, Johnsson, R, Holloway, S.P, Stevens, S.W, Damha, M.J, Hart, P.J.
Deposit date:2014-04-23
Release date:2014-08-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of lariat RNA recognition by the intron debranching enzyme Dbr1.
Nucleic Acids Res., 42, 2014
3MPX
DownloadVisualize
BU of 3mpx by Molmil
Crystal structure of the DH and PH-1 domains of human FGD5
Descriptor: FYVE, RhoGEF and PH domain-containing protein 5, UNKNOWN ATOM OR ION
Authors:Shen, Y, Nedyalkova, L, Tong, Y, Tempel, W, Crombet, L, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2010-04-27
Release date:2010-06-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the DH and PH-1 domains of human FGD5
TO BE PUBLISHED
8J3O
DownloadVisualize
BU of 8j3o by Molmil
Formate dehydrogenase wild-type enzyme from Candida dubliniensis complexed with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Formate dehydrogenase, MAGNESIUM ION
Authors:Ma, W, Zheng, Y.C, Geng, Q, Chen, C.
Deposit date:2023-04-17
Release date:2023-09-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Engineering a Formate Dehydrogenase for NADPH Regeneration.
Chembiochem, 24, 2023
8U21
DownloadVisualize
BU of 8u21 by Molmil
A Highly Stable Variant of Corynactis Californica Green Fluorescent Protein, ccGFP E6
Descriptor: Green Fluorescent Protein Variant E6, ccGFP E6
Authors:Hung, L.-W, Terwilliger, T.C, Waldo, G, Nguyen, H.B.
Deposit date:2023-09-05
Release date:2024-01-31
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Engineering highly stable variants of Corynactis californica green fluorescent proteins.
Protein Sci., 33, 2024
3MN0
DownloadVisualize
BU of 3mn0 by Molmil
Introducing a 2-His-1-Glu Non-Heme Iron Center into Myoglobin confers Nitric Oxide Reductase activity: Cu(II)-CN-FeBMb(-His) form
Descriptor: COPPER (II) ION, CYANIDE ION, Myoglobin, ...
Authors:Lin, Y.-W, Yeung, N, Gao, Y.-G, Miner, K.D, Lei, L, Robinson, H, Lu, Y.
Deposit date:2010-04-20
Release date:2010-08-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Introducing a 2-his-1-glu nonheme iron center into myoglobin confers nitric oxide reductase activity.
J.Am.Chem.Soc., 132, 2010
1G7Y
DownloadVisualize
BU of 1g7y by Molmil
THE CRYSTAL STRUCTURE OF THE 58KD VEGETATIVE LECTIN FROM THE TROPICAL LEGUME DOLICHOS BIFLORUS
Descriptor: CALCIUM ION, MANGANESE (II) ION, STEM/LEAF LECTIN DB58, ...
Authors:Buts, L, Hamelryck, T.W, Loris, R, Dao-Thi, M.-H, Wyns, L, Etzler, M.E.
Deposit date:2000-11-15
Release date:2000-11-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Weak protein-protein interactions in lectins: the crystal structure of a vegetative lectin from the legume Dolichos biflorus.
J.Mol.Biol., 309, 2001
2WFE
DownloadVisualize
BU of 2wfe by Molmil
Structure of the Candida albicans cytosolic leucyl-tRNA synthetase editing domain
Descriptor: CYTOSOLIC LEUCYL-TRNA SYNTHETASE
Authors:Seiradake, E, Mao, W, Hernandez, V, Baker, S.J, Plattner, J.J, Alley, M.R.K, Cusack, S.
Deposit date:2009-04-04
Release date:2009-05-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structures of the Human and Fungal Cytosolic Leucyl-tRNA Synthetase Editing Domains: A Structural Basis for the Rational Design of Antifungal Benzoxaboroles.
J.Mol.Biol., 390, 2009
2OMF
DownloadVisualize
BU of 2omf by Molmil
OMPF PORIN
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, MATRIX PORIN OUTER MEMBRANE PROTEIN F
Authors:Cowan, S.W.
Deposit date:1995-02-28
Release date:1995-12-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Refined Structure of Ompf Porin from E.Coli at 2.4 Angstroms Resolution
To be Published
2VSY
DownloadVisualize
BU of 2vsy by Molmil
Xanthomonas campestris putative OGT (XCC0866), apostructure
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Schuettelkopf, A.W, Clarke, A.J, van Aalten, D.M.F.
Deposit date:2008-05-01
Release date:2008-11-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Insights Into Mechanism and Specificity of O-Glcnac Transferase.
Embo J., 27, 2008
2W18
DownloadVisualize
BU of 2w18 by Molmil
Crystal structure of the C-terminal WD40 domain of human PALB2
Descriptor: GLYCEROL, PARTNER AND LOCALIZER OF BRCA2
Authors:Oliver, A.W, Pearl, L.H.
Deposit date:2008-10-15
Release date:2009-07-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Recruitment of Brca2 by Palb2
Embo Rep., 10, 2009
7VYV
DownloadVisualize
BU of 7vyv by Molmil
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Descriptor: Depolymerase
Authors:Cai, R, Ren, Z, Zhao, R, Wang, X, Guo, Z, Du, R, Han, W, Ru, H, Gu, J.
Deposit date:2021-11-15
Release date:2023-08-30
Last modified:2024-09-11
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:Structural biology and functional features of phage-derived depolymerase Depo32 on Klebsiella pneumoniae with K2 serotype capsular polysaccharides.
Microbiol Spectr, 11, 2023
6C1K
DownloadVisualize
BU of 6c1k by Molmil
HypoPP mutant with ligand1
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, GUANIDINE, Ion transport protein, ...
Authors:Catterall, W.A, Zheng, N, Jiang, D, Gamal El-Din, T.M.
Deposit date:2018-01-04
Release date:2018-05-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for gating pore current in periodic paralysis.
Nature, 557, 2018
7VZ3
DownloadVisualize
BU of 7vz3 by Molmil
Cryo-EM structure of Depo32, a Klebsiella phage depolymerase targets the K2 serotype K. pneumoniae
Descriptor: Depolymerase
Authors:Cai, R, Ren, Z, Zhao, R, Wang, X, Guo, Z, Du, R, Han, W, Ru, H, Gu, J.
Deposit date:2021-11-15
Release date:2023-08-30
Last modified:2024-09-11
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:Structural biology and functional features of phage-derived depolymerase Depo32 on Klebsiella pneumoniae with K2 serotype capsular polysaccharides.
Microbiol Spectr, 11, 2023
1GK0
DownloadVisualize
BU of 1gk0 by Molmil
Structure-based prediction of modifications in glutarylamidase to allow single-step enzymatic production of 7-aminocephalosporanic acid from cephalosporin C
Descriptor: 1,2-ETHANEDIOL, CEPHALOSPORIN ACYLASE, PHOSPHATE ION
Authors:Fritz-Wolf, K, Koller, K.P, Lange, G, Liesum, A, Sauber, K, Schreuder, H, Aretz, W, Kabsch, W.
Deposit date:2001-08-07
Release date:2002-01-01
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Prediction of Modifications in Glutarylamidase to Allow Single-Step Enzymatic Production of 7-Aminocephalosporanic Acid from Cephalosporin C.
Protein Sci., 11, 2002
8TL0
DownloadVisualize
BU of 8tl0 by Molmil
Structure of activated SAVED-CHAT filament
Descriptor: CHAT domain-containing protein, RNA (5'-R(*AP*AP*A)-3')
Authors:Bravo, J.P.K, Taylor, D.W.
Deposit date:2023-07-26
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Type III-B CRISPR-Cas cascade of proteolytic cleavages.
Science, 383, 2024

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon