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PDB: 34568 results

3HU2
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BU of 3hu2 by Molmil
Structure of p97 N-D1 R86A mutant in complex with ATPgS
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Tang, W.-K.
Deposit date:2009-06-12
Release date:2010-06-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:A novel ATP-dependent conformation in p97 N-D1 fragment revealed by crystal structures of disease-related mutants.
Embo J., 29, 2010
5A14
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BU of 5a14 by Molmil
Human CDK2 with type II inhibitor
Descriptor: 1-[4-(2-azanylpyrimidin-4-yl)oxyphenyl]-3-[4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl]urea, CYCLIN-DEPENDENT KINASE 2
Authors:Alexander, L.T, Elkins, J.M, Kopec, J, Fedorov, O, Savitsky, P.A, Moebitz, H, Cowan-Jacob, S.W, Szklarz, M, Pike, A.C.W, Carpenter, E.P, Krojer, T, Bountra, C, Edwards, A.M, Knapp, S.
Deposit date:2015-04-27
Release date:2015-07-22
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Type II Inhibitors Targeting Cdk2.
Acs Chem.Biol., 10, 2015
5A1V
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BU of 5a1v by Molmil
The structure of the COPI coat linkage I
Descriptor: ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT ALPHA, COATOMER SUBUNIT BETA, ...
Authors:Dodonova, S.O, Diestelkoetter-Bachert, P, von Appen, A, Hagen, W.J.H, Beck, R, Beck, M, Wieland, F, Briggs, J.A.G.
Deposit date:2015-05-06
Release date:2015-07-08
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (21 Å)
Cite:Vesicular Transport. A Structure of the Copi Coat and the Role of Coat Proteins in Membrane Vesicle Assembly.
Science, 349, 2015
7OC4
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BU of 7oc4 by Molmil
Alpha-humulene synthase AsR6 from Sarocladium schorii in complex with thiolodiphosphate and a cyclized reaction product.
Descriptor: (1E,4E,8E)-2,6,6,9-Tetramethyl-1,4-8-cycloundecatriene, (R,R)-2,3-BUTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Schotte, C, Lukat, P, Deuschmann, A, Blankenfeldt, W, Cox, R.J.
Deposit date:2021-04-26
Release date:2021-07-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Understanding and Engineering the Stereoselectivity of Humulene Synthase.
Angew.Chem.Int.Ed.Engl., 60, 2021
7OBA
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BU of 7oba by Molmil
Cryo-EM structure of human RNA Polymerase I in complex with RRN3
Descriptor: DNA-directed RNA polymerase I subunit RPA1, DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA2, ...
Authors:Misiaszek, A.D, Girbig, M, Mueller, C.W.
Deposit date:2021-04-21
Release date:2021-12-08
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of human RNA polymerase I.
Nat.Struct.Mol.Biol., 28, 2021
6Z17
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BU of 6z17 by Molmil
PqsR (MvfR) in complex with antagonist 6
Descriptor: 6-chloranyl-3-[(2-propan-2-yl-2,3-dihydro-1,3-thiazol-4-yl)methyl]quinazolin-4-one, Transcriptional regulator MvfR
Authors:Richardson, W.K, Emsley, J.
Deposit date:2020-05-12
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Novel quinazolinone inhibitors of the Pseudomonas aeruginosa quorum sensing transcriptional regulator PqsR.
Eur.J.Med.Chem., 208, 2020
1XFU
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BU of 1xfu by Molmil
Crystal structure of anthrax edema factor (EF) truncation mutant, EF-delta 64 in complex with calmodulin
Descriptor: CALCIUM ION, Calmodulin 2, Calmodulin-sensitive adenylate cyclase, ...
Authors:Shen, Y, Zhukovskaya, N.L, Guo, Q, Florian, J, Tang, W.J.
Deposit date:2004-09-15
Release date:2005-05-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Calcium-independent calmodulin binding and two-metal-ion catalytic mechanism of anthrax edema factor.
EMBO J., 24, 2005
3SYY
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BU of 3syy by Molmil
Crystal Structure of an alkaline exonuclease (LHK-Exo) from Laribacter hongkongensis
Descriptor: Exonuclease, MAGNESIUM ION
Authors:Yang, W, Chen, W.Y, Wang, H, Zhang, Q, Zhou, W, Bartlam, M, Watt, R.M, Rao, Z.
Deposit date:2011-07-18
Release date:2012-02-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional insight into the mechanism of an alkaline exonuclease from Laribacter hongkongensis.
Nucleic Acids Res., 39, 2011
7OBB
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BU of 7obb by Molmil
Cryo-EM structure of human RNA Polymerase I Open Complex
Descriptor: DNA non-template strand, DNA template strand, DNA-directed RNA polymerase I subunit RPA1, ...
Authors:Misiaszek, A.D, Girbig, M, Mueller, C.W.
Deposit date:2021-04-21
Release date:2021-12-08
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of human RNA polymerase I.
Nat.Struct.Mol.Biol., 28, 2021
3SZ4
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BU of 3sz4 by Molmil
Crystal Structure of LHK-Exo in complex with dAMP
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Exonuclease, MAGNESIUM ION
Authors:Yang, W, Chen, W.Y, Wang, H, Zhang, Q, Zhou, W, Bartlam, M, Watt, R.M, Rao, Z.
Deposit date:2011-07-18
Release date:2012-02-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structural and functional insight into the mechanism of an alkaline exonuclease from Laribacter hongkongensis.
Nucleic Acids Res., 39, 2011
4QVC
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BU of 4qvc by Molmil
E.coli Hfq in complex with RNA Aus
Descriptor: RNA (5'-R(*AP*U*AP*AP*CP*UP*A)-3'), RNA-binding protein Hfq
Authors:Wang, L.J, Wang, W.W, Li, F.D, Wu, J.H, Gong, Q.G, Shi, Y.Y.
Deposit date:2014-07-14
Release date:2015-05-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural insights into the recognition of the internal A-rich linker from OxyS sRNA by Escherichia coli Hfq
Nucleic Acids Res., 43, 2015
1Q55
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BU of 1q55 by Molmil
W-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:He, W, Cowin, P, Stokes, D.L.
Deposit date:2003-08-06
Release date:2003-10-07
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (30 Å)
Cite:Untangling Desmosomal Knots with Electron Tomography
Science, 302, 2003
7OEX
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BU of 7oex by Molmil
Crystal structure of RBBP9 in complex with phenylalanine
Descriptor: PHENYLALANINE, Serine hydrolase RBBP9
Authors:Fiedler, M, Tang, S, Chin, J.W.
Deposit date:2021-05-04
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Mechanism-based traps enable protease and hydrolase substrate discovery.
Nature, 602, 2022
7WBJ
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BU of 7wbj by Molmil
Cryo-EM structure of N-terminal modified human vasoactive intestinal polypeptide receptor 2 (VIP2R) in complex with PACAP27 and Gs
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Xu, Y.N, Feng, W.B, Zhou, Q.T, Liang, A.Y, Li, J, Dai, A.T, Zhao, F.H, Yan, J.H, Chen, C.W, Li, H, Zhao, L.H, Xia, T, Jiang, Y, Xu, H.E, Yang, D.H, Wang, M.W.
Deposit date:2021-12-16
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:A distinctive ligand recognition mechanism by the human vasoactive intestinal polypeptide receptor 2.
Nat Commun, 13, 2022
6W1V
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BU of 6w1v by Molmil
RT XFEL structure of the two-flash state of Photosystem II (2F, S3-rich) at 2.09 Angstrom resolution
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Ibrahim, M, Fransson, T, Chatterjee, R, Cheah, M.H, Hussein, R, Lassalle, L, Sutherlin, K.D, Young, I.D, Fuller, F.D, Gul, S, Kim, I.-S, Simon, P.S, de Lichtenberg, C, Chernev, P, Bogacz, I, Pham, C, Orville, A.M, Saichek, N, Northen, T.R, Batyuk, A, Carbajo, S, Alonso-Mori, R, Tono, K, Owada, S, Bhowmick, A, Bolotovski, R, Mendez, D, Moriarty, N.W, Holton, J.M, Dobbek, H, Brewster, A.S, Adams, P.D, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yachandra, V.K, Yano, J.
Deposit date:2020-03-04
Release date:2020-06-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Untangling the sequence of events during the S2→ S3transition in photosystem II and implications for the water oxidation mechanism.
Proc.Natl.Acad.Sci.USA, 117, 2020
7E14
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BU of 7e14 by Molmil
Compound2_GLP-1R_OWL833_Gs complex structure
Descriptor: 3-[(1S,2S)-1-(5-[(4S)-2,2-dimethyloxan-4-yl]-2-{(4S)-2-(4-fluoro-3,5-dimethylphenyl)-3-[3-(4-fluoro-1-methyl-1H-indazol-5-yl)-2-oxo-2,3-dihydro-1H-imidazol-1-yl]-4-methyl-2,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridine-5-carbonyl}-1H-indol-1-yl)-2-methylcyclopropyl]-1,2,4-oxadiazol-5(4H)-one, CHOLESTEROL, G protein, ...
Authors:Cong, Z.T, Chen, L.N, Ma, H.L, Yang, D.H, Xu, H.E, Zhang, Y, Wang, M.W.
Deposit date:2021-01-30
Release date:2021-07-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular insights into ago-allosteric modulation of the human glucagon-like peptide-1 receptor.
Nat Commun, 12, 2021
3MVG
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BU of 3mvg by Molmil
Native structure of IRIP, a type I ribosome inactivating protein from Iris hollandica var. at 1.25 A
Descriptor: GLYCEROL, Ribosome inactivating type 1 protein, SULFATE ION
Authors:Meyer, A, Weber, W, Singh, T.P, Betzel, C.
Deposit date:2010-05-04
Release date:2011-06-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Native structure of IRIP, a type I ribosome inactivating protein from Iris hollandica var. at 1.25 A
to be published
3JAC
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BU of 3jac by Molmil
Cryo-EM study of a channel
Descriptor: Piezo-type mechanosensitive ion channel component 1
Authors:Ge, J, Li, W, Zhao, Q, Li, N, Xiao, B, Gao, N, Yang, M.
Deposit date:2015-06-05
Release date:2015-09-23
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Architecture of the mammalian mechanosensitive Piezo1 channel
Nature, 527, 2015
4KOL
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BU of 4kol by Molmil
The structure of hemagglutinin from avian-origin H7N9 influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, Hemagglutinin HA2
Authors:Shi, Y, Zhang, W, Wang, F, Qi, J, Song, H, Wu, Y, Gao, F, Zhang, Y, Fan, Z, Gong, W, Wang, D, Shu, Y, Wang, Y, Yan, J, Gao, G.F.
Deposit date:2013-05-12
Release date:2013-11-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:Structures and receptor binding of hemagglutinins from human-infecting H7N9 influenza viruses.
Science, 342, 2013
3D03
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BU of 3d03 by Molmil
1.9A structure of Glycerophoshphodiesterase (GpdQ) from Enterobacter aerogenes
Descriptor: COBALT (II) ION, Phosphohydrolase
Authors:Hadler, K.S, Tanifum, E, Yip, S.H.-C, Miti, N, Guddat, L.W, Jackson, C.J, Gahan, L.R, Carr, P.D, Nguyen, K, Ollis, D.L, Hengge, A.C, Larrabee, J.A, Schenk, G.
Deposit date:2008-04-30
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Substrate-promoted formation of a catalytically competent binuclear center and regulation of reactivity in a glycerophosphodiesterase from Enterobacter aerogenes.
J.Am.Chem.Soc., 130, 2008
4KON
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BU of 4kon by Molmil
The structure of hemagglutinin from avian-origin H7N9 influenza virus in complex with human receptor analog 6'SLNLN (NeuAcα2-6Galβ1-4GlcNAcβ1-3Galβ1-4Glc)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, Hemagglutinin HA2, ...
Authors:Shi, Y, Zhang, W, Wang, F, Qi, J, Song, H, Wu, Y, Gao, F, Zhang, Y, Fan, Z, Gong, W, Wang, D, Shu, Y, Wang, Y, Yan, J, Gao, G.F.
Deposit date:2013-05-12
Release date:2013-11-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures and receptor binding of hemagglutinins from human-infecting H7N9 influenza viruses.
Science, 342, 2013
8JEX
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BU of 8jex by Molmil
Cryo-EM structure of alpha-synuclein gS87 fibril
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-synuclein, unverified amino acid chain
Authors:Xia, W.C, Sun, Y.P, Liu, C.
Deposit date:2023-05-16
Release date:2024-04-17
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Phosphorylation and O-GlcNAcylation at the same alpha-synuclein site generate distinct fibril structures.
Nat Commun, 15, 2024
6VYD
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BU of 6vyd by Molmil
Terpenoid Cyclase FgGS in Complex with Mg, Inorganic Pyrophosphate, and Benzyltriethylammonium cation
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Herbst-Gervasoni, C.J, Christianson, D.W.
Deposit date:2020-02-26
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Discovery of the cryptic function of terpene cyclases as aromatic prenyltransferases.
Nat Commun, 11, 2020
5ET0
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BU of 5et0 by Molmil
Crystal structure of Myo3b-ARB2 in complex with Espin1-AR
Descriptor: Espin, Myosin-IIIb
Authors:Liu, H, Li, J, Liu, W, Zhang, M.
Deposit date:2015-11-17
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Myosin III-mediated cross-linking and stimulation of actin bundling activity of Espin
Elife, 5, 2016
2EDC
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BU of 2edc by Molmil
CRYSTALLOGRAPHIC AND FLUORESCENCE STUDIES OF THE INTERACTION OF HALOALKANE DEHALOGENASE WITH HALIDE IONS: STUDIES WITH HALIDE COMPOUNDS REVEAL A HALIDE BINDING SITE IN THE ACTIVE SITE
Descriptor: HALOALKANE DEHALOGENASE, IODIDE ION
Authors:Verschueren, K.H.G, Dijkstra, B.W.
Deposit date:1993-08-31
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic and fluorescence studies of the interaction of haloalkane dehalogenase with halide ions. Studies with halide compounds reveal a halide binding site in the active site.
Biochemistry, 32, 1993

224004

数据于2024-08-21公开中

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