Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 34840 件

7NPV
DownloadVisualize
BU of 7npv by Molmil
MycP5-free ESX-5 inner membrane complex, State II
分子名称: ESX-5 secretion system ATPase EccB5, ESX-5 secretion system protein EccC5, ESX-5 secretion system protein EccD5
著者Fahrenkamp, D, Bunduc, C.M, Wald, J, Ummels, R, Bitter, W, Houben, E.N.G, Marlovits, T.C.
登録日2021-02-28
公開日2021-06-02
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (6.66 Å)
主引用文献Structure and dynamics of a mycobacterial type VII secretion system.
Nature, 593, 2021
4TXE
DownloadVisualize
BU of 4txe by Molmil
ScCTS1 in complex with compound 5
分子名称: (2S)-1-(2,3-dihydro-1H-inden-2-ylamino)-3-(3,4-dimethylphenoxy)propan-2-ol, Endochitinase
著者Schuettelkopf, A.W, van Aalten, D.M.F.
登録日2014-07-03
公開日2014-08-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Screening-based discovery of Aspergillus fumigatus plant-type chitinase inhibitors
FEBS Lett, 588, 2014
1CDM
DownloadVisualize
BU of 1cdm by Molmil
MODULATION OF CALMODULIN PLASTICITY IN MOLECULAR RECOGNITION ON THE BASIS OF X-RAY STRUCTURES
分子名称: CALCIUM ION, CALMODULIN, PEPTIDE CALMODULIN-DEPENDENT PROTEIN KINASE II
著者Meador, W.E, Quiocho, F.A.
登録日1993-10-08
公開日1994-08-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Modulation of calmodulin plasticity in molecular recognition on the basis of x-ray structures.
Science, 262, 1993
1S9G
DownloadVisualize
BU of 1s9g by Molmil
CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R120394.
分子名称: 4-[4-AMINO-6-(5-CHLORO-1H-INDOL-4-YLMETHYL)-[1,3,5]TRIAZIN-2-YLAMINO]-BENZONITRILE, POL polyprotein [Contains: Reverse transcriptase]
著者Das, K, Clark Jr, A.D, Ludovici, D.W, Kukla, M.J, Decorte, B, Lewi, P.J, Hughes, S.H, Janssen, P.A, Arnold, E.
登録日2004-02-04
公開日2004-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Roles of Conformational and Positional Adaptability in Structure-Based Design of TMC125-R165335 (Etravirine) and Related Non-nucleoside Reverse Transcriptase Inhibitors That Are Highly Potent and Effective against Wild-Type and Drug-Resistant HIV-1 Variants.
J.Med.Chem., 47, 2004
1CCU
DownloadVisualize
BU of 1ccu by Molmil
STRUCTURE-ASSISTED REDESIGN OF A PROTEIN-ZINC BINDING SITE WITH FEMTOMOLAR AFFINITY
分子名称: CARBONIC ANHYDRASE II, SULFATE ION, ZINC ION
著者Ippolito, J.A, Christianson, D.W.
登録日1994-12-09
公開日1995-02-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure-assisted redesign of a protein-zinc-binding site with femtomolar affinity.
Proc.Natl.Acad.Sci.USA, 92, 1995
1C8P
DownloadVisualize
BU of 1c8p by Molmil
NMR STRUCTURE OF THE LIGAND BINDING DOMAIN OF THE COMMON BETA-CHAIN IN THE GM-CSF, IL-3 AND IL-5 RECEPTORS
分子名称: CYTOKINE RECEPTOR COMMON BETA CHAIN
著者Mulhern, T.D, D'Andrea, R.J, Gaunt, C, Vandeleur, L, Vadas, M.A, Lopez, A.F, Booker, G.W, Bagley, C.J.
登録日1999-10-05
公開日2000-06-15
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献The solution structure of the cytokine-binding domain of the common beta-chain of the receptors for granulocyte-macrophage colony-stimulating factor, interleukin-3 and interleukin-5.
J.Mol.Biol., 297, 2000
1CDG
DownloadVisualize
BU of 1cdg by Molmil
NUCLEOTIDE SEQUENCE AND X-RAY STRUCTURE OF CYCLODEXTRIN GLYCOSYLTRANSFERASE FROM BACILLUS CIRCULANS STRAIN 251 IN A MALTOSE-DEPENDENT CRYSTAL FORM
分子名称: CALCIUM ION, CYCLODEXTRIN GLYCOSYL-TRANSFERASE, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Lawson, C.L, Van Montfort, R, Strokopytov, B.V, Kalk, K.H, Rozeboom, H.J, Dijkstra, B.W.
登録日1993-08-02
公開日1994-01-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Nucleotide sequence and X-ray structure of cyclodextrin glycosyltransferase from Bacillus circulans strain 251 in a maltose-dependent crystal form.
J.Mol.Biol., 236, 1994
1J6V
DownloadVisualize
BU of 1j6v by Molmil
CRYSTAL STRUCTURE OF D. RADIODURANS LUXS, C2
分子名称: AUTOINDUCER-2 PRODUCTION PROTEIN LUXS, ZINC ION
著者Lewis, H.A, Furlong, E.B, Bergseid, M.G, Sanderson, W.E, Buchanan, S.G.
登録日2001-05-14
公開日2001-06-08
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A structural genomics approach to the study of quorum sensing: crystal structures of three LuxS orthologs.
Structure, 9, 2001
1C9T
DownloadVisualize
BU of 1c9t by Molmil
COMPLEX OF BDELLASTASIN WITH BOVINE TRYPSIN
分子名称: BDELLASTASIN, TRYPSIN
著者Rester, U, Bode, W, Moser, M, Parry, M.A, Huber, R, Auerswald, E.
登録日1999-08-03
公開日2000-08-03
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the complex of the antistasin-type inhibitor bdellastasin with trypsin and modelling of the bdellastasin-microplasmin system.
J.Mol.Biol., 293, 1999
1CCT
DownloadVisualize
BU of 1cct by Molmil
STRUCTURE-ASSISTED REDESIGN OF A PROTEIN-ZINC BINDING SITE WITH FEMTOMOLAR AFFINITY
分子名称: CARBONIC ANHYDRASE II, ZINC ION
著者Ippolito, J.A, Christianson, D.W.
登録日1994-12-09
公開日1995-02-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-assisted redesign of a protein-zinc-binding site with femtomolar affinity.
Proc.Natl.Acad.Sci.USA, 92, 1995
1IM3
DownloadVisualize
BU of 1im3 by Molmil
Crystal Structure of the human cytomegalovirus protein US2 bound to the MHC class I molecule HLA-A2/tax
分子名称: HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN, Human T-cell lymphotropic virus type 1 Tax peptide, ...
著者Gewurz, B.E, Gaudet, R, Tortorella, D, Wang, E.W, Ploegh, H.L, Wiley, D.C.
登録日2001-05-09
公開日2001-06-06
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Antigen presentation subverted: Structure of the human cytomegalovirus protein US2 bound to the class I molecule HLA-A2.
Proc.Natl.Acad.Sci.USA, 98, 2001
1CB1
DownloadVisualize
BU of 1cb1 by Molmil
THREE-DIMENSIONAL SOLUTION STRUCTURE OF CA2+-LOADED PORCINE CALBINDIN D9K DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
分子名称: CALBINDIN D9K
著者Akke, M, Drakenberg, T, Chazin, W.J.
登録日1991-12-13
公開日1993-10-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of Ca(2+)-loaded porcine calbindin D9k determined by nuclear magnetic resonance spectroscopy.
Biochemistry, 31, 1992
1J73
DownloadVisualize
BU of 1j73 by Molmil
Crystal structure of an unstable insulin analog with native activity.
分子名称: ZINC ION, insulin a, insulin b
著者Wan, Z, Zhao, M, Nakagawa, S, Jia, W, Weiss, M.A.
登録日2001-05-15
公開日2001-05-30
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Non-standard insulin design: structure-activity relationships at the periphery of the insulin receptor.
J.Mol.Biol., 315, 2002
4WR3
DownloadVisualize
BU of 4wr3 by Molmil
Y274F alanine racemase from E. coli
分子名称: Alanine racemase, biosynthetic, GLYCEROL, ...
著者Squire, C.J, Yosaatmadja, Y, Patrick, W.M.
登録日2014-10-23
公開日2015-11-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanistic and Evolutionary Insights from the Reciprocal Promiscuity of Two Pyridoxal Phosphate-dependent Enzymes.
J.Biol.Chem., 291, 2016
3DKU
DownloadVisualize
BU of 3dku by Molmil
Crystal structure of Nudix hydrolase Orf153, ymfB, from Escherichia coli K-1
分子名称: Putative phosphohydrolase
著者Hong, M.K, Kim, J.K, Jung, J.H, Jung, J.W, Choi, J.Y, Kang, L.W.
登録日2008-06-26
公開日2009-06-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Crystal structure of Nudix hydrolase Orf153, ymfB, from Escherichia coli K-1.
To be Published
4WYC
DownloadVisualize
BU of 4wyc by Molmil
Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with a thiazole benzamide inhibitor
分子名称: 1,2-ETHANEDIOL, 4-(1H-imidazol-1-yl)benzamide, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, ...
著者Finzel, B.C, Dai, R, Geders, T.W.
登録日2014-11-17
公開日2015-07-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Fragment-Based Exploration of Binding Site Flexibility in Mycobacterium tuberculosis BioA.
J.Med.Chem., 58, 2015
4WKT
DownloadVisualize
BU of 4wkt by Molmil
n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ
分子名称: 1-BUTANE BORONIC ACID, Acyl-homoserine lactone acylase PvdQ, GLYCEROL
著者Wu, R, Clevenger, K.D, Fast, W, Liu, D.
登録日2014-10-03
公開日2014-11-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.782 Å)
主引用文献n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ.
Biochemistry, 53, 2014
1J6W
DownloadVisualize
BU of 1j6w by Molmil
CRYSTAL STRUCTURE OF HAEMOPHILUS INFLUENZAE LUXS
分子名称: AUTOINDUCER-2 PRODUCTION PROTEIN LUXS, METHIONINE, ZINC ION
著者Lewis, H.A, Furlong, E.B, Bergseid, M.G, Sanderson, W.E, Buchanan, S.G.
登録日2001-05-14
公開日2001-06-08
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A structural genomics approach to the study of quorum sensing: crystal structures of three LuxS orthologs.
Structure, 9, 2001
1INV
DownloadVisualize
BU of 1inv by Molmil
A SIALIC ACID DERIVED PHOSPHONATE ANALOG INHIBITS DIFFERENT STRAINS OF INFLUENZA VIRUS NEURAMINIDASE WITH DIFFERENT EFFICIENCIES
分子名称: (1R)-4-acetamido-1,5-anhydro-2,4-dideoxy-1-phosphono-D-glycero-D-galacto-octitol, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者White, C.L, Janakiraman, M.N, Laver, W.G, Philippon, C, Vasella, A, Air, G.M, Luo, M.
登録日1994-09-26
公開日1995-02-07
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A sialic acid-derived phosphonate analog inhibits different strains of influenza virus neuraminidase with different efficiencies.
J.Mol.Biol., 245, 1995
2BHW
DownloadVisualize
BU of 2bhw by Molmil
PEA LIGHT-HARVESTING COMPLEX II AT 2.5 ANGSTROM RESOLUTION
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6'S,9R,9'R,13R,13'S)-4',5'-DIDEHYDRO-5',6',7',8',9,9',10,10',11,11',12,12',13,13',14,14',15,15'-OCTADECAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Standfuss, J, Terwisscha van Scheltinga, A.C, Lamborghini, M, Kuehlbrandt, W.
登録日2005-01-19
公開日2006-05-23
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanisms of Photoprotection and Nonphotochemical Quenching in Pea Light-Harvesting Complex at 2.5 A Resolution.
Embo J., 24, 2005
2TGP
DownloadVisualize
BU of 2tgp by Molmil
THE GEOMETRY OF THE REACTIVE SITE AND OF THE PEPTIDE GROUPS IN TRYPSIN, TRYPSINOGEN AND ITS COMPLEXES WITH INHIBITORS
分子名称: CALCIUM ION, SULFATE ION, TRYPSIN INHIBITOR, ...
著者Huber, R, Bode, W, Deisenhofer, J, Schwager, P.
登録日1982-09-27
公開日1983-01-18
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Geometry of the Reactive Site and of the Peptide Groups in Trypsin, Trypsinogen and its Complexes with Inhibitors
Acta Crystallogr.,Sect.B, 39, 1983
4CAU
DownloadVisualize
BU of 4cau by Molmil
THREE-DIMENSIONAL STRUCTURE OF DENGUE VIRUS SEROTYPE 1 COMPLEXED WITH 2 HMAB 14C10 FAB
分子名称: ENVELOPE PROTEIN E, FAB 14C10
著者Teoh, E.P, Kukkaro, P, Teo, E.W, Lim, A.P, Tan, T.T, Yip, A, Schul, W, Aung, M, Kostyuchenko, V.A, Leo, Y.S, Chan, S.H, Smith, K.G, Chan, A.H, Zou, G, Ooi, E.E, Kemeny, D.M, Tan, G.K, Ng, J.K, Ng, M.L, Alonso, S, Fisher, D, Shi, P.Y, Hanson, B.J, Lok, S.M, Macary, P.A.
登録日2013-10-09
公開日2013-10-16
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献The Structural Basis for Serotype-Specific Neutralization of Dengue Virus by a Human Antibody.
Sci.Trans.Med, 4, 2012
1JCZ
DownloadVisualize
BU of 1jcz by Molmil
CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN CARBONIC ANHYDRASE XII
分子名称: ACETIC ACID, CARBONIC ANHYDRASE XII, ZINC ION
著者Whittington, D.A, Waheed, A, Ulmasov, B, Shah, G.N, Grubb, J.H, Sly, W.S, Christianson, D.W.
登録日2001-06-11
公開日2001-08-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of the dimeric extracellular domain of human carbonic anhydrase XII, a bitopic membrane protein overexpressed in certain cancer tumor cells.
Proc.Natl.Acad.Sci.USA, 98, 2001
1S4B
DownloadVisualize
BU of 1s4b by Molmil
Crystal structure of human thimet oligopeptidase.
分子名称: Thimet oligopeptidase, ZINC ION
著者Ray, K, Hines, C.S, Coll-Rodriguez, J, Rodgers, D.W.
登録日2004-01-15
公開日2004-07-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of human thimet oligopeptidase provides insight into substrate recognition, regulation, and localization
J.Biol.Chem., 279, 2004
4KK1
DownloadVisualize
BU of 4kk1 by Molmil
Crystal Structure of TSC1 core domain from S. pombe
分子名称: Tuberous sclerosis 1 protein homolog
著者Sun, W, Zhu, Y, Wang, Z.Z, Zhong, Q, Gao, F, Lou, J.Z, Gong, W.M, Xu, W.Q.
登録日2013-05-05
公開日2013-07-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of the yeast TSC1 core domain and implications for tuberous sclerosis pathological mutations.
Nat Commun, 4, 2013

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon