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PDB: 34568 件

3HDH
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PIG HEART SHORT CHAIN L-3-HYDROXYACYL COA DEHYDROGENASE REVISITED: SEQUENCE ANALYSIS AND CRYSTAL STRUCTURE DETERMINATION
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTEIN (L-3-HYDROXYACYL COA DEHYDROGENASE)
著者Barycki, J.J, O'Brien, L.K, Birktoft, J.J, Strauss, A.W, Banaszak, L.J.
登録日1999-04-13
公開日1999-10-08
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Pig heart short chain L-3-hydroxyacyl-CoA dehydrogenase revisited: sequence analysis and crystal structure determination.
Protein Sci., 8, 1999
8EZG
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Monobody 12D1 bound to KRAS(G12D)
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Hattori, T, Glasser, E, Akkapeddi, P, Ketavarapu, G, Teng, K.W, Koide, A, Koide, S.
登録日2022-10-31
公開日2023-07-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Exploring switch II pocket conformation of KRAS(G12D) with mutant-selective monobody inhibitors.
Proc.Natl.Acad.Sci.USA, 120, 2023
5AD3
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Bivalent binding to BET bromodomains
分子名称: 3-methoxy-N-[2-[4-[1-(3-methoxy-[1,2,4]triazolo[4,3-b]pyridazin-6-yl)-4-piperidyl]phenoxy]ethyl]-N-methyl-[1,2,4]triazolo[4,3-b]pyridazin-6-amine, BROMODOMAIN-CONTAINING PROTEIN 4
著者Waring, M.J, Chen, H, Rabow, A.A, Walker, G, Bobby, R, Boiko, S, Bradbury, R.H, Callis, R, Dale, I, Daniels, D, Flavell, L, Holdgate, G, Jowitt, T.A, Kikhney, A, McAlister, M, Ogg, D, Patel, J, Petteruti, P, Robb, G.R, Robers, M, Stratton, N, Svergun, D.I, Wang, W, Whittaker, D.
登録日2015-08-19
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Potent and Selective Bivalent Inhibitors of Bet Bromodomains
Nat.Chem.Biol., 12, 2016
1E71
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MYROSINASE FROM SINAPIS ALBA with bound ascorbate
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ASCORBIC ACID, ...
著者Burmeister, W.P.
登録日2000-08-23
公開日2001-01-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献High Resolution X-Ray Crystallography Shows that Ascorbate is a Cofactor for Myrosinase and Substitutes for the Function of the Catalytic Base
J.Biol.Chem., 275, 2000
5ABD
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CRYSTAL STRUCTURE OF VEGFR-1 DOMAIN 2 IN PRESENCE OF CU
分子名称: COPPER (II) ION, SODIUM ION, SULFATE ION, ...
著者Gaucher, J.-F, Lascombe, M.-B, Reille-Seroussi, M, Gagey-Eilstein, N, Broussy, S, Coric, P, Seijo, B, Gautier, B, Liu, W.-Q, Huguenot, F, Inguimbert, N, Bouaziz, S, Vidal, M, Broutin, I.
登録日2015-08-05
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.995 Å)
主引用文献Biophysical Studies of the Induced Dimerization of Human Vegf R Receptor 1 Binding Domain by Divalent Metals Competing with Vegf-A
Plos One, 11, 2016
7Q18
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Beta-lactoglobulin mutant FAF (I56F/L39A/M107F), unliganded form
分子名称: Beta-lactoglobulin, SULFATE ION
著者Loch, J.I, Cymborowski, M.T, Minor, W, Lewinski, K.
登録日2021-10-18
公開日2022-05-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.804 Å)
主引用文献New ligand-binding sites identified in the crystal structures of [beta]-lactoglobulin complexes with desipramine
Iucrj, 9, 2022
1EN4
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CRYSTAL STRUCTURE ANALYSIS OF THE E. COLI MANGANESE SUPEROXIDE DISMUTASE Q146H MUTANT
分子名称: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE
著者Edwards, R.A, Whittaker, M.M, Baker, E.N, Whittaker, J.W, Jameson, G.B.
登録日2000-03-20
公開日2001-06-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Outer sphere mutations perturb metal reactivity in manganese superoxide dismutase.
Biochemistry, 40, 2001
3E50
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Crystal structure of human insulin degrading enzyme in complex with transforming growth factor-alpha
分子名称: Insulin-degrading enzyme, Protransforming growth factor alpha, ZINC ION
著者Guo, Q, Manolopoulou, M, Tang, W.-J.
登録日2008-08-12
公開日2009-08-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular Basis for the Recognition and Cleavages of IGF-II, TGF-alpha, and Amylin by Human Insulin-Degrading Enzyme.
J.Mol.Biol., 395, 2010
2ZBJ
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Crystal structure of Dioclea rostrata lectin
分子名称: CALCIUM ION, Lectin alpha chain, MANGANESE (II) ION, ...
著者de Oliveira, T.M, Delatorre, P, da Rocha, B.A.M, de Sousa, E.P, Nascimento, K.S, Bezerra, G.A, Moura, T.R, Benevides, R.G, Bezerra, E.H.S, Moreno, F.B.M.B, Freire, V.N, de Azevedo Jr, W.F, Cavada, B.S.
登録日2007-10-22
公開日2008-08-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of Dioclea rostrata lectin: Insights into understanding the pH-dependent dimer-tetramer equilibrium and the structural basis for carbohydrate recognition in Diocleinae lectins
J.Struct.Biol., 164, 2008
8F5C
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Mirror-image DNA containing 2'-OMe-L-dC modification
分子名称: DNA (5'-D(*(0DG))-R(P*(XE6))-D(P*(0DG)P*(0DT)P*(0DA)P*(0DC)P*(0DG)P*(0DC))-3'), MAGNESIUM ION
著者Zhang, W, Dantsu, Y.
登録日2022-11-13
公開日2023-09-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Synthesis and Structural Characterization of 2'-Deoxy-2'-Methoxy-L-Cytidine Nucleic Acids
Chemistryselect, 2023
6UBL
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Structure of DynF from the Dynemicin Biosynthesis Pathway of Micromonospora chersina
分子名称: DynF, PALMITIC ACID
著者Kosgei, A.J, Miller, M.D, Xu, W, Bhardwaj, M, Van Lanen, S.G, Thorson, J.S, Phillips Jr, G.N.
登録日2019-09-12
公開日2020-09-16
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.499 Å)
主引用文献The crystal structure of DynF from the dynemicin-biosynthesis pathway of Micromonospora chersina.
Acta Crystallogr.,Sect.F, 78, 2022
8ELZ
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HRAS R97M Crystal Form 1
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CALCIUM ION, GTPase HRas, ...
著者Johnson, C.W, Mattos, C.
登録日2022-09-26
公開日2023-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.961 Å)
主引用文献Allosteric site variants affect GTP hydrolysis on Ras.
Protein Sci., 32, 2023
8ELS
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HRAS R97A Crystal Form 1 R-state
分子名称: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ...
著者Davis, D, Johnson, C.W, Mattos, C.
登録日2022-09-26
公開日2023-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.267 Å)
主引用文献Allosteric site variants affect GTP hydrolysis on Ras.
Protein Sci., 32, 2023
7VIJ
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Crystal structure of USP7-HUBL domain
分子名称: Ubiquitin carboxyl-terminal hydrolase 7
著者Feng, N, Zeng, K.W.
登録日2021-09-27
公開日2022-08-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Neuroinflammation inhibition by small-molecule targeting USP7 noncatalytic domain for neurodegenerative disease therapy.
Sci Adv, 8, 2022
7K1D
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Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM_77291
分子名称: (3R)-3-{4-[(3R)-4-(3,4-difluorobenzene-1-carbonyl)morpholin-3-yl]-1H-1,2,3-triazol-1-yl}-N-hydroxy-4-(naphthalen-2-yl)butanamide, 1,4-DIETHYLENE DIOXIDE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Liang, W.G, Deprez, R, Bosc, D, Tang, W.
登録日2020-09-07
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of human insulin degrading enzyme (IDE) in complex with compound 2
To Be Published
7K1F
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Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM_88558
分子名称: 1,4-DIETHYLENE DIOXIDE, 3,4-difluoro-N-({1-[(2R)-4-(hydroxyamino)-4-oxo-1-(quinolin-7-yl)butan-2-yl]-1H-1,2,3-triazol-4-yl}methyl)benzamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Liang, W.G, Deprez, R, Bosc, D, Tang, W.
登録日2020-09-07
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of human insulin degrading enzyme (IDE) in complex with compound 4
To Be Published
5A4A
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Crystal structure of the OSK domain of Drosophila Oskar
分子名称: MATERNAL EFFECT PROTEIN OSKAR, SULFATE ION
著者Jeske, M, Glatt, S, Ephrussi, A, Mueller, C.W.
登録日2015-06-05
公開日2015-07-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.699 Å)
主引用文献The Crystal Structure of the Drosophila Germline Inducer Oskar Identifies Two Domains with Distinct Vasa Helicase-and RNA-Binding Activities.
Cell Rep., 12, 2015
7K1E
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Crystal structure of human insulin degrading enzyme (IDE) in complex with compound BDM_88646
分子名称: 1,4-DIETHYLENE DIOXIDE, 3,4-difluoro-N-[(1S)-1-{1-[(2R)-4-(hydroxyamino)-4-oxo-1-(5,6,7,8-tetrahydronaphthalen-2-yl)butan-2-yl]-1H-1,2,3-triazol-4-yl}ethyl]benzamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Liang, W.G, Deprez, R, Bosc, D, Tang, W.
登録日2020-09-07
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of human insulin degrading enzyme (IDE) in complex with compound 3
To Be Published
8SVC
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Crystal Structure of SBP from Klebsiella pneumoniae
分子名称: Metal ABC transporter substrate-binding protein, SULFATE ION, ZINC ION
著者Giles, M.W, Cole, G.B, Ng, D, McDevitt, C.A, Moraes, T.F.
登録日2023-05-16
公開日2024-01-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Zinc acquisition and its contribution to Klebsiella pneumoniae virulence.
Front Cell Infect Microbiol, 13, 2023
5AIM
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BU of 5aim by Molmil
Crystal structure of T138 central eWH domain
分子名称: GLYCEROL, TRANSCRIPTION FACTOR TAU 138 KDA SUBUNIT
著者Male, G, Glatt, S, Mueller, C.W.
登録日2015-02-16
公開日2015-06-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献Architecture of TFIIIC and its role in RNA polymerase III pre-initiation complex assembly.
Nat Commun, 6, 2015
1EL0
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SOLUTION STRUCTURE OF THE HUMAN CC CHEMOKINE, I-309
分子名称: I-309
著者Keizer, D.W, Crump, M.P, Lee, T.W, Slupsky, C.M, Clark-Lewis, I, Sykes, B.D.
登録日2000-03-11
公開日2000-09-01
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Human CC chemokine I-309, structural consequences of the additional disulfide bond.
Biochemistry, 39, 2000
3ETW
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Crystal Structure of bacterial adhesin FadA
分子名称: Adhesin A, THIOCYANATE ION
著者Nithianantham, S, Xu, M, Wu, N, Shoham, M, Han, Y.W.
登録日2008-10-08
公開日2008-12-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of FadA Adhesin from Fusobacterium nucleatum Reveals a Novel Oligomerization Motif, the Leucine Chain.
J.Biol.Chem., 284, 2009
1IGZ
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Crystal Structure of Linoleic acid Bound in the Cyclooxygenase Channel of Prostaglandin Endoperoxide H Synthase-1.
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LINOLEIC ACID, ...
著者Malkowski, M.G, Thuresson, E.D, Smith, W.L, Garavito, R.M.
登録日2001-04-18
公開日2001-12-12
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of eicosapentaenoic and linoleic acids in the cyclooxygenase site of prostaglandin endoperoxide H synthase-1.
J.Biol.Chem., 276, 2001
3EU5
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Crystal structure of FTase(ALPHA-subunit; BETA-subunit DELTA C10) in complex with BiotinGPP
分子名称: (2E,6E)-3,7-dimethyl-8-({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)octa-2,6-dien-1-yl trihydrogen diphosphate, Protein farnesyltransferase subunit beta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, ...
著者Guo, Z, Nguyen, U.T.T, Delon, C, Bon, R.S, Blankenfeldt, W, Goody, R.S, Waldmann, H, Wolters, D, Alexandrov, K.
登録日2008-10-09
公開日2009-07-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Analysis of the eukaryotic prenylome by isoprenoid affinity tagging
Nat.Chem.Biol., 5, 2009
3HT5
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Crystal Structure of IlvE a Branched Chain Amino Acid Transaminase from Mycobacterium tuberculosis
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, branched-chain-amino-acid aminotransferase
著者Tremblay, L.W, Blanchard, J.S.
登録日2009-06-11
公開日2009-12-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The 1.9 A structure of the branched-chain amino-acid transaminase (IlvE) from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.F, 65, 2009

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