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PDB: 34568 件

3LO1
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Crystal structure of human alpha-defensin 1 (Y16A mutant)
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, AZIDE ION, Neutrophil defensin 1
著者Pazgier, M, Lu, W.
登録日2010-02-03
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Trp-26 imparts functional versatility to human alpha-defensin HNP1.
J.Biol.Chem., 285, 2010
4XYN
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X-ray structure of Ca(2+)-S100B with human RAGE-derived W61 peptide
分子名称: CALCIUM ION, Protein S100-B, Receptor for advanced glycation endproducts-derived peptide (W61)
著者Jensen, J.L, Indurthi, V.S.K, Neau, D, Vetter, S.W, Colbert, C.L.
登録日2015-02-02
公開日2015-05-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural insights into the binding of the human receptor for advanced glycation end products (RAGE) by S100B, as revealed by an S100B-RAGE-derived peptide complex.
Acta Crystallogr.,Sect.D, 71, 2015
6FBV
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Single particle cryo em structure of Mycobacterium tuberculosis RNA polymerase in complex with Fidaxomicin
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Das, K, Lin, W, Ebright, E.
登録日2017-12-19
公開日2018-02-28
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献Structural Basis of Transcription Inhibition by Fidaxomicin (Lipiarmycin A3).
Mol. Cell, 70, 2018
6EYN
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Structure of the 8D6 (anti-IgE) Fab
分子名称: 1,2-ETHANEDIOL, 8D6 Fab heavy chain, 8D6 Fab light chain, ...
著者Chen, J.B, Ramadani, F, Pang, M.O.Y, Beavil, R.L, Holdom, M.D, Mitropoulou, A.N, Beavil, A.J, Gould, H.J, Chang, T.W, Sutton, B.J, McDonnell, J.M, Davies, A.M.
登録日2017-11-13
公開日2018-08-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for selective inhibition of immunoglobulin E-receptor interactions by an anti-IgE antibody.
Sci Rep, 8, 2018
7T8S
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Light Harvesting complex phycoerythrin PE 566, from the cryptophyte Cryptomonas pyrenoidifera
分子名称: Bilin 584 (doubly linked), Bilin 584 (single linked), Bilin 618 (single linked), ...
著者Michie, K.A, Harrop, S.J, Rathbone, H.W, Wilk, K.E, Curmi, P.M.G.
登録日2021-12-17
公開日2023-02-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular structures reveal the origin of spectral variation in cryptophyte light harvesting antenna proteins.
Protein Sci., 32, 2023
6M05
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Trimolecular G-quadruplex
分子名称: DNA (5'-D(*GP*TP*TP*AP*GP*G)-3')
著者Jing, H.T, Fu, W.Q, Zhang, N.
登録日2020-02-20
公開日2021-01-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structural study on the self-trimerization of d(GTTAGG) into a dynamic trimolecular G-quadruplex assembly preferentially in Na+ solution with a moderate K+ tolerance.
Nucleic Acids Res., 49, 2021
5IJT
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Human Peroxiredoxin 2 Oxidized (SS)
分子名称: Peroxiredoxin-2, ZINC ION
著者Haynes, A.C, Bolduc, J.A, Lowther, W.T.
登録日2016-03-02
公開日2017-09-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.148 Å)
主引用文献Novel hyperoxidation resistance motifs in 2-Cys peroxiredoxins.
J. Biol. Chem., 293, 2018
8AJQ
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Crystal structure of PA2722 from Pseudomonas aeruginosa PAO1
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CENP-V/GFA domain-containing protein, GLYCEROL, ...
著者Popp, M.A, Blankenfeldt, W.
登録日2022-07-28
公開日2022-10-05
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structure of PA2722 from P. aeruginosa PAO1
To Be Published
8B0J
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CryoEM structure of bacterial RNaseE.RapZ.GlmZ complex central to the control of cell envelope biogenesis
分子名称: GlmZ small RNA, RNase adapter protein RapZ, Ribonuclease E
著者Islam, M.S, Hardwick, H.W, Chirgadze, D.Y, Luisi, B.F.
登録日2022-09-07
公開日2022-10-05
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.99 Å)
主引用文献Structure of a bacterial ribonucleoprotein complex central to the control of cell envelope biogenesis.
Embo J., 42, 2023
4XAP
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Crystal structure of aldo-keto reductase from Sinorhizobium meliloti 1021
分子名称: Aldo-keto reductase
著者Gasiorowska, O.A, Handing, K.B, Shabalin, I.G, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-12-15
公開日2014-12-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of aldo-keto reductase from Sinorhizobium meliloti 1021
to be published
6F5D
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Trypanosoma brucei F1-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP synthase gamma subunit, ATP synthase subunit alpha, ...
著者Montgomery, M.G, Gahura, O, Leslie, A.G.W, Zikova, A, Walker, J.E.
登録日2017-12-01
公開日2018-02-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献ATP synthase fromTrypanosoma bruceihas an elaborated canonical F1-domain and conventional catalytic sites.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4X9V
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PLK-1 polo-box domain in complex with Bioactive Imidazolium-containing phosphopeptide macrocycle 3C
分子名称: Phosphopeptide macrocycle 3C, Serine/threonine-protein kinase PLK1
著者Grant, R.A, Qian, W.-J, Yaffe, M.B, Burke, T.R.
登録日2014-12-11
公開日2015-07-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.429 Å)
主引用文献Neighbor-directed histidine N ( tau )-alkylation: A route to imidazolium-containing phosphopeptide macrocycles.
Biopolymers, 104, 2015
1RK6
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The enzyme in complex with 50mM CdCl2
分子名称: ACETATE ION, CADMIUM ION, D-aminoacylase, ...
著者Lai, W.L, Chou, L.Y, Ting, C.Y, Tsai, Y.C, Liaw, S.H.
登録日2003-11-20
公開日2004-04-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献The functional role of the binuclear metal center in D-aminoacylase: one-metal activation and second-metal attenuation.
J.Biol.Chem., 279, 2004
7WRG
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BU of 7wrg by Molmil
Crystal structure of full-length kinesin-3 KLP-6
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein, MAGNESIUM ION
著者Wang, W.J, Ren, J.Q, Song, W.Y, Feng, W.
登録日2022-01-26
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献The architecture of kinesin-3 KLP-6 reveals a multilevel-lockdown mechanism for autoinhibition.
Nat Commun, 13, 2022
2XKM
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BU of 2xkm by Molmil
Consensus structure of Pf1 filamentous bacteriophage from X-ray fibre diffraction and solid-state NMR
分子名称: CAPSID PROTEIN G8P
著者Straus, S.K, P Scott, W.R, Schwieters, C.D, Marvin, D.A.
登録日2010-07-09
公開日2010-11-24
最終更新日2023-12-20
実験手法FIBER DIFFRACTION (3.3 Å), SOLID-STATE NMR
主引用文献Consensus Structure of Pf1 Filamentous Bacteriophage from X-Ray Fibre Diffraction and Solid-State NMR.
Eur.Biophys.J., 40, 2011
1I7J
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BU of 1i7j by Molmil
CRYSTAL STRUCTURE OF 2'-O-ME(CGCGCG)2: AN RNA DUPLEX AT 1.19 A RESOLUTION. 2-METHYL-2,4-PENTANEDIOL AND MAGNESIUM BINDING.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5'-R(*(OMC)P*(OMG)P*(OMC)P*(OMG)P*(OMC)P*(OMG))-3', MAGNESIUM ION
著者Adamiak, D.A, Rypniewski, W.R, Milecki, J, Adamiak, R.W.
登録日2001-03-09
公開日2001-09-21
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献The 1.19 A X-ray structure of 2'-O-Me(CGCGCG)(2) duplex shows dehydrated RNA with 2-methyl-2,4-pentanediol in the minor groove.
Nucleic Acids Res., 29, 2001
4IJL
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BU of 4ijl by Molmil
Fragment-based Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A
分子名称: Replication protein A 70 kDa DNA-binding subunit, {[5-(3-chloro-1-benzothiophen-2-yl)-4-phenyl-4H-1,2,4-triazol-3-yl]sulfanyl}acetic acid
著者Feldkamp, M.D, Patrone, J.D, Kennedy, J.P, Frank, A.O, Vangamudi, B, Pelz, N.F, Rossanese, O.W, Waterson, A.G, Fesik, S.W, Chazin, W.J.
登録日2012-12-21
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Discovery of Protein-Protein Interaction Inhibitors of Replication Protein A.
ACS MED.CHEM.LETT., 4, 2013
2VZE
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BU of 2vze by Molmil
Crystal structure of human acyl-CoA synthetase medium-chain family member 2A (L64P mutation) in complex with AMP
分子名称: ACYL-COENZYME A SYNTHETASE ACSM2A, MITOCHONDRIAL, ADENOSINE MONOPHOSPHATE, ...
著者Yue, W.W, Kochan, G.T, Pilka, E.S, Bhatia, C, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Wikstrom, M, Bountra, C, Oppermann, U.
登録日2008-07-31
公開日2008-10-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural Snapshots for the Conformation- Dependent Catalysis by Human Medium-Chain Acyl- Coenzyme a Synthetase Acsm2A.
J.Mol.Biol., 388, 2009
6PFH
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BU of 6pfh by Molmil
Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP and 2-(2-(4-((2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl)benzamido)-4-cyanophenyl)acetic acid.
分子名称: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, METHOTREXATE, ...
著者Czyzyk, D.C, Valhondo, M, Jorgensen, W.L, Anderson, K.S.
登録日2019-06-21
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Structure activity relationship towards design of cryptosporidium specific thymidylate synthase inhibitors.
Eur.J.Med.Chem., 183, 2019
2N6G
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Solution structure of an MbtH-like protein from Mycobacterium avium, Seattle Structural Genomics Center for Infectious Disease target MyavA.01649.c
分子名称: MbtH-like protein
著者Buchko, G.W, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2015-08-20
公開日2015-12-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a MbtH-like protein from Mycobacterium avium.
To be Published
2VN2
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Crystal structure of the N-terminal domain of DnaD protein from Geobacillus kaustophilus HTA426
分子名称: CHROMOSOME REPLICATION INITIATION PROTEIN, MAGNESIUM ION
著者Huang, C.-Y, Chang, Y.-W, Chen, W.-T, Sun, Y.-J, Hsiao, C.-D.
登録日2008-01-30
公開日2008-08-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the N-Terminal Domain of Geobacillus Kaustophilus Hta426 Dnad Protein.
Biochem.Biophys.Res.Commun., 375, 2008
1C10
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CRYSTAL STRUCTURE OF HEW LYSOZYME UNDER PRESSURE OF XENON (8 BAR)
分子名称: CHLORIDE ION, PROTEIN (LYSOZYME), SODIUM ION, ...
著者Prange, T, Schiltz, M, Pernot, L, Colloc'h, N, Longhi, S, Bourguet, W, Fourme, R.
登録日1999-07-16
公開日1999-07-22
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Exploring hydrophobic sites in proteins with xenon or krypton.
Proteins, 30, 1998
3WA9
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The nucleosome containing human H2A.Z.1
分子名称: DNA (146-MER), Histone H2A.Z, Histone H2B type 1-J, ...
著者Horikoshi, N, Sato, K, Shimada, K, Arimura, Y, Osakabe, A, Tachiwana, H, Iwasaki, W, Kagawa, W, Harata, M, Kimura, H, Kurumizaka, H.
登録日2013-04-30
公開日2013-12-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献Structural polymorphism in the L1 loop regions of human H2A.Z.1 and H2A.Z.2
Acta Crystallogr.,Sect.D, 69, 2013
5YDF
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Crystal structure of a disease-related gene, hCDC73(1-100)
分子名称: Parafibromin
著者Sun, W, Kuang, X.L, Liu, Y.P, Tian, L.F, Yan, X.X, Xu, W.Q.
登録日2017-09-13
公開日2017-12-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.399 Å)
主引用文献Crystal structure of the N-terminal domain of human CDC73 and its implications for the hyperparathyroidism-jaw tumor (HPT-JT) syndrome
Sci Rep, 7, 2017
8AMG
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Crystal structure of AUGUGGCAU duplex with barium ions (model 1)
分子名称: BARIUM ION, RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3')
著者Kiliszek, A, Rypniewski, W.
登録日2022-08-03
公開日2022-11-23
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structure and thermodynamics of a UGG motif interacting with Ba2+ and other metal ions: accommodating changes in the RNA structure and the presence of a G(syn)-G(syn) pair.
Rna, 29, 2022

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