PDB Search results for query - 일본 단백질구조 데이터 뱅크

PDB: 143 results

Surface glycan-binding protein B from Bacteroides fluxus in complex with mixed-linkage glucotriose
Descriptor:	GUANIDINE, PKD domain protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose
Authors:	Tamura, K, Brumer, H, Van Petegem, F.
Deposit date:	2020-11-26
Release date:	2021-02-17
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Distinct protein architectures mediate species-specific beta-glucan binding and metabolism in the human gut microbiota. J.Biol.Chem., 296, 2021

7KWB

Surface glycan-binding protein B from Bacteroides thetaiotaomicron
Descriptor:	BtSGBP-B
Authors:	Tamura, K, Brumer, H, Van Petegem, F.
Deposit date:	2020-11-30
Release date:	2021-02-17
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Distinct protein architectures mediate species-specific beta-glucan binding and metabolism in the human gut microbiota. J.Biol.Chem., 296, 2021

7KV3

Surface glycan-binding protein A from Bacteroides thetaiotaomicron in complex with laminarihexaose
Descriptor:	RagB/SusD family nutrient uptake outer membrane protein, SULFATE ION, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose
Authors:	Tamura, K, Brumer, H, Van Petegem, F.
Deposit date:	2020-11-26
Release date:	2021-02-17
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (2.05 Å)
Cite:	Distinct protein architectures mediate species-specific beta-glucan binding and metabolism in the human gut microbiota. J.Biol.Chem., 296, 2021

7KV4

Surface glycan-binding protein A from Bacteroides fluxus
Descriptor:	SusD family protein
Authors:	Tamura, K, Brumer, H, Van Petegem, F.
Deposit date:	2020-11-26
Release date:	2021-02-17
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (1.84 Å)
Cite:	Distinct protein architectures mediate species-specific beta-glucan binding and metabolism in the human gut microbiota. J.Biol.Chem., 296, 2021

7KWC

Surface glycan-binding protein B (truncated) from Bacteroides thetaiotaomicron
Descriptor:	BtSGBP-B_31-285
Authors:	Tamura, K, Brumer, H, Van Petegem, F.
Deposit date:	2020-11-30
Release date:	2021-02-17
Last modified:	2024-03-06
Method:	X-RAY DIFFRACTION (2.611 Å)
Cite:	Distinct protein architectures mediate species-specific beta-glucan binding and metabolism in the human gut microbiota. J.Biol.Chem., 296, 2021

3FYQ

Structure of Drosophila melanogaster talin IBS2 domain (residues 1981-2168)
Descriptor:	CG6831-PA (Talin)
Authors:	Cheung, T.Y.S, Fairchild, M.J, Zarivach, R, Tanentzapf, G, Van Petegem, F.
Deposit date:	2009-01-22
Release date:	2009-02-03
Last modified:	2018-01-24
Method:	X-RAY DIFFRACTION (1.95 Å)
Cite:	Crystal structure of the talin integrin binding domain 2. J.Mol.Biol., 387, 2009

6ULB

Sex Hormone-binding globulin mutant E176K in complex with Danazol
Descriptor:	CALCIUM ION, Danazol, Sex hormone-binding globulin
Authors:	Round, P.W, Das, S, Van Petegem, F.
Deposit date:	2019-10-07
Release date:	2020-10-21
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (1.75 Å)
Cite:	Structural and biochemical analyses of danazol interactions with sex hormone-binding globulin and effects on androgen action To Be Published

6VHO

Glycoside hydrolase family 16 endo-glucanase from Bacteroides ovatus in complex with G4G4G3G-NHCOCH2Br
Descriptor:	Glycosyl hydrolase family 16, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-N-acetyl-beta-D-glucopyranosylamine
Authors:	Tamura, K, Brumer, H, van Petegem, F.
Deposit date:	2020-01-10
Release date:	2021-01-13
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (2.148 Å)
Cite:	Orthogonal Active-Site Labels for Mixed-Linkage endo-beta-Glucanases. Acs Chem.Biol., 16, 2021

6UY7

Crystal structure of the STAC3 tandem SH3 domains - P269R
Descriptor:	1,2-ETHANEDIOL, SH3 and cysteine-rich domain-containing protein 3
Authors:	Rufenach, B, Van Petegem, F.
Deposit date:	2019-11-12
Release date:	2020-06-17
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (2.105 Å)
Cite:	Multiple Sequence Variants in STAC3 Affect Interactions with CaV1.1 and Excitation-Contraction Coupling. Structure, 28, 2020

6UY9

Crystal structure of the STAC3 tandem SH3 domains - P269R, W284S
Descriptor:	1,2-ETHANEDIOL, SH3 and cysteine-rich domain-containing protein 3, SODIUM ION
Authors:	Rufenach, B, Van Petegem, F.
Deposit date:	2019-11-12
Release date:	2020-06-17
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Multiple Sequence Variants in STAC3 Affect Interactions with CaV1.1 and Excitation-Contraction Coupling. Structure, 28, 2020

4KEJ

Crystal structure of mouse Ryanodine Receptor 2 (1-217) disease mutant R169Q
Descriptor:	Ryanodine receptor 2
Authors:	Kimlicka, L, Van Petegem, F.
Deposit date:	2013-04-25
Release date:	2013-09-04
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.553 Å)
Cite:	Type 2 Ryanodine Receptor Domain A Contains a Unique and Dynamic alpha-Helix That Transitions to a beta-Strand in a Mutant Linked with a Heritable Cardiomyopathy. J.Mol.Biol., 425, 2013

4KEI

Crystal structure of mouse Ryanodine Receptor 2 (1-217) disease mutant P164S
Descriptor:	Ryanodine receptor 2
Authors:	Kimlicka, L, Van Petegem, F.
Deposit date:	2013-04-25
Release date:	2013-09-04
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.406 Å)
Cite:	Type 2 Ryanodine Receptor Domain A Contains a Unique and Dynamic alpha-Helix That Transitions to a beta-Strand in a Mutant Linked with a Heritable Cardiomyopathy. J.Mol.Biol., 425, 2013

4KEK

Crystal structure of mouse Ryanodine Receptor 2 (1-217) disease mutant R176Q
Descriptor:	Ryanodine receptor 2, SULFATE ION
Authors:	Kimlicka, L, Van Petegem, F.
Deposit date:	2013-04-25
Release date:	2013-09-04
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.146 Å)
Cite:	Type 2 Ryanodine Receptor Domain A Contains a Unique and Dynamic alpha-Helix That Transitions to a beta-Strand in a Mutant Linked with a Heritable Cardiomyopathy. J.Mol.Biol., 425, 2013

4DJC

1.35 A crystal structure of the NaV1.5 DIII-IV-Ca/CaM complex
Descriptor:	CALCIUM ION, Calmodulin, ISOPROPYL ALCOHOL, ...
Authors:	Sarhan, M.F, Tung, C.-C, Van Petegem, F, Ahern, C.A.
Deposit date:	2012-02-01
Release date:	2012-02-22
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (1.35 Å)
Cite:	Crystallographic basis for calcium regulation of sodium channels. Proc.Natl.Acad.Sci.USA, 109, 2012

4ETT

Crystal structure of rabbit ryanodine receptor 1 mutant E2764K
Descriptor:	GLYCEROL, Ryanodine receptor 1
Authors:	Yuchi, Z, Lau, K, Van Petegem, F.
Deposit date:	2012-04-24
Release date:	2012-06-13
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (2.195 Å)
Cite:	Disease mutations in the ryanodine receptor central region: crystal structures of a phosphorylation hot spot domain. Structure, 20, 2012

6B29

Crystal structure of the second SH3 domain of STAC3 (309-364)
Descriptor:	SH3 and cysteine-rich domain-containing protein 3
Authors:	Wong King Yuen, S.M, Van Petegem, F.
Deposit date:	2017-09-19
Release date:	2017-10-25
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (1.3 Å)
Cite:	Structural insights into binding of STAC proteins to voltage-gated calcium channels. Proc. Natl. Acad. Sci. U.S.A., 114, 2017

4ERV

Crystal structure of human ryanodine receptor 3 (2597-2800)
Descriptor:	GLYCEROL, Ryanodine receptor 3, SULFATE ION
Authors:	Yuchi, Z, Lau, K, Van Petegem, F.
Deposit date:	2012-04-20
Release date:	2012-06-13
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (1.75 Å)
Cite:	Disease mutations in the ryanodine receptor central region: crystal structures of a phosphorylation hot spot domain. Structure, 20, 2012

4ESU

Crystal structure of rabbit ryanodine receptor 1 mutant S2776M
Descriptor:	GLYCEROL, Ryanodine receptor 1
Authors:	Yuchi, Z, Lau, K, Van Petegem, F.
Deposit date:	2012-04-23
Release date:	2012-06-13
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (1.59 Å)
Cite:	Disease mutations in the ryanodine receptor central region: crystal structures of a phosphorylation hot spot domain. Structure, 20, 2012

6B27

Crystal structure of human STAC2 Tandem SH3 Domains (296-411) in complex with a CaV1.1 II-III loop peptide
Descriptor:	CHLORIDE ION, SH3 and cysteine-rich domain-containing protein 2, SULFATE ION, ...
Authors:	Wong King Yuen, S.M, Van Petegem, F.
Deposit date:	2017-09-19
Release date:	2017-10-25
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (1.73 Å)
Cite:	Structural insights into binding of STAC proteins to voltage-gated calcium channels. Proc. Natl. Acad. Sci. U.S.A., 114, 2017

6DLG

Crystal structure of a SHIP1 surface entropy reduction mutant
Descriptor:	ISOPROPYL ALCOHOL, Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1
Authors:	Gardill, B.R, Cheung, S.T, Mui, A.L, Van Petegem, F.
Deposit date:	2018-06-01
Release date:	2019-06-05
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (1.499 Å)
Cite:	Interleukin-10 and Small Molecule SHIP1 Allosteric Regulators Trigger Anti-Inflammatory Effects Through SHIP1/STAT3 Complexes Biorxiv, 2020

4I2S

Crystal structure of rabbit ryanodine receptor 1 (residues 1-536) disease mutant I404M
Descriptor:	GLYCEROL, Ryanodine receptor 1
Authors:	Kimlicka, L, Van Petegem, F.
Deposit date:	2012-11-22
Release date:	2013-02-20
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Disease mutations in the ryanodine receptor N-terminal region couple to a mobile intersubunit interface. Nat Commun, 4, 2013

4I8M

Crystal structure of rabbit Ryanodine receptor 1 (residues 1-536) disease mutant V219I
Descriptor:	GLYCEROL, Ryanodine receptor 1
Authors:	Kimlicka, L, Van Petegem, F.
Deposit date:	2012-12-03
Release date:	2013-02-20
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Disease mutations in the ryanodine receptor N-terminal region couple to a mobile intersubunit interface. Nat Commun, 4, 2013

4I96

Crystal structure of the N-terminal two domains of the skeletal muscle ryanodine receptor (rabbit RyR1) residues 217-536
Descriptor:	Ryanodine receptor 1
Authors:	Kimlicka, L, Tung, C.C, Van Petegem, F.
Deposit date:	2012-12-04
Release date:	2013-02-20
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.73 Å)
Cite:	Disease mutations in the ryanodine receptor N-terminal region couple to a mobile intersubunit interface. Nat Commun, 4, 2013

4I7I

Crystal structure of rabbit ryanodine receptor 1 (residues 1-536) disease mutant L14R
Descriptor:	GLYCEROL, Ryanodine receptor 1
Authors:	Kimlicka, L, Van Petegem, F.
Deposit date:	2012-11-30
Release date:	2013-02-20
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2.9 Å)
Cite:	Disease mutations in the ryanodine receptor N-terminal region couple to a mobile intersubunit interface. Nat Commun, 4, 2013

4I1E

Crystal structure of Rabbit Ryanodine Receptor 1 (residues 1-536) disease mutant G249R
Descriptor:	Ryanodine receptor 1
Authors:	Kimlicka, L, Van Petegem, F.
Deposit date:	2012-11-20
Release date:	2013-02-20
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Disease mutations in the ryanodine receptor N-terminal region couple to a mobile intersubunit interface. Nat Commun, 4, 2013

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Total results:	143
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Van Petegem, F"